EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000015395 (Gene tree)
Gene ID: 102177115
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 18717 bases
Position: chr3:77365679-77384395
Accession: 102177115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000014297	TRM13	PF05206.14	2.2e-91	1	1
ENSCHIP00000014297	zf-U11-48K	PF05253.12	3.4e-09	1	1
ENSCHIP00000014297	zf-TRM13_CCCH	PF11722.8	3.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000022091	TRMT13-201	2333	XM_005678046	ENSCHIP00000014297	481 (aa)	XP_005678103	UPI00029D71E8

Gene Model

Click here to download ENSCHIG00000015395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000015395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000015395	TRMT13	100	90.852	ENSG00000122435	TRMT13	100	90.852	Homo_sapiens
ENSCHIG00000015395	TRMT13	96	48.024	ENSAPOG00000015131	trmt13	99	48.503	Acanthochromis_polyacanthus
ENSCHIG00000015395	TRMT13	100	91.268	ENSAMEG00000008917	TRMT13	100	91.268	Ailuropoda_melanoleuca
ENSCHIG00000015395	TRMT13	97	51.464	ENSACIG00000005804	trmt13	97	50.518	Amphilophus_citrinellus
ENSCHIG00000015395	TRMT13	96	48.814	ENSAOCG00000023585	trmt13	99	48.814	Amphiprion_ocellaris
ENSCHIG00000015395	TRMT13	96	48.617	ENSAPEG00000004025	trmt13	99	48.617	Amphiprion_percula
ENSCHIG00000015395	TRMT13	97	51.875	ENSATEG00000006597	trmt13	98	51.875	Anabas_testudineus
ENSCHIG00000015395	TRMT13	88	68.545	ENSAPLG00000014924	TRMT13	99	68.545	Anas_platyrhynchos
ENSCHIG00000015395	TRMT13	96	64.009	ENSACAG00000003498	TRMT13	98	64.009	Anolis_carolinensis
ENSCHIG00000015395	TRMT13	100	90.644	ENSANAG00000019525	TRMT13	100	90.644	Aotus_nancymaae
ENSCHIG00000015395	TRMT13	96	53.797	ENSACLG00000020018	trmt13	99	53.797	Astatotilapia_calliptera
ENSCHIG00000015395	TRMT13	96	53.928	ENSAMXG00000017963	trmt13	98	54.219	Astyanax_mexicanus
ENSCHIG00000015395	TRMT13	100	97.297	ENSBTAG00000015781	TRMT13	100	97.297	Bos_taurus
ENSCHIG00000015395	TRMT13	100	88.565	ENSCJAG00000000200	TRMT13	99	89.908	Callithrix_jacchus
ENSCHIG00000015395	TRMT13	65	93.631	ENSCAFG00000020021	TRMT13	99	93.631	Canis_familiaris
ENSCHIG00000015395	TRMT13	57	93.407	ENSCAFG00020011572	TRMT13	95	92.727	Canis_lupus_dingo
ENSCHIG00000015395	TRMT13	98	80.127	ENSTSYG00000010811	TRMT13	98	86.869	Carlito_syrichta
ENSCHIG00000015395	TRMT13	75	68.219	ENSCAPG00000009085	TRMT13	100	68.767	Cavia_aperea
ENSCHIG00000015395	TRMT13	100	86.694	ENSCPOG00000000694	TRMT13	100	86.694	Cavia_porcellus
ENSCHIG00000015395	TRMT13	100	90.644	ENSCCAG00000023772	TRMT13	100	90.644	Cebus_capucinus
ENSCHIG00000015395	TRMT13	100	90.437	ENSCATG00000033556	TRMT13	100	90.437	Cercocebus_atys
ENSCHIG00000015395	TRMT13	89	82.436	ENSCLAG00000008220	TRMT13	100	83.138	Chinchilla_lanigera
ENSCHIG00000015395	TRMT13	100	90.644	ENSCSAG00000001506	TRMT13	100	90.644	Chlorocebus_sabaeus
ENSCHIG00000015395	TRMT13	100	70.062	ENSCPBG00000026671	TRMT13	100	70.062	Chrysemys_picta_bellii
ENSCHIG00000015395	TRMT13	100	90.852	ENSCANG00000034659	TRMT13	100	90.852	Colobus_angolensis_palliatus
ENSCHIG00000015395	TRMT13	99	84.200	ENSCGRG00001021601	Trmt13	99	84.200	Cricetulus_griseus_chok1gshd
ENSCHIG00000015395	TRMT13	53	81.712	ENSCGRG00000000093	-	99	81.712	Cricetulus_griseus_crigri
ENSCHIG00000015395	TRMT13	97	48.832	ENSCSEG00000000591	trmt13	99	48.832	Cynoglossus_semilaevis
ENSCHIG00000015395	TRMT13	98	47.844	ENSCVAG00000017342	trmt13	96	48.975	Cyprinodon_variegatus
ENSCHIG00000015395	TRMT13	96	57.082	ENSDARG00000102846	trmt13	97	57.082	Danio_rerio
ENSCHIG00000015395	TRMT13	57	89.130	ENSDNOG00000001710	TRMT13	84	89.130	Dasypus_novemcinctus
ENSCHIG00000015395	TRMT13	100	85.447	ENSDORG00000015808	Trmt13	99	85.447	Dipodomys_ordii
ENSCHIG00000015395	TRMT13	96	30.353	FBgn0037435	CG18048	95	30.353	Drosophila_melanogaster
ENSCHIG00000015395	TRMT13	99	75.417	ENSETEG00000005819	TRMT13	99	75.417	Echinops_telfairi
ENSCHIG00000015395	TRMT13	94	45.671	ENSEBUG00000014444	trmt13	96	45.671	Eptatretus_burgeri
ENSCHIG00000015395	TRMT13	100	92.723	ENSEASG00005015918	TRMT13	100	92.723	Equus_asinus_asinus
ENSCHIG00000015395	TRMT13	100	92.723	ENSECAG00000022626	TRMT13	100	92.723	Equus_caballus
ENSCHIG00000015395	TRMT13	79	80.063	ENSEEUG00000000294	TRMT13	80	80.063	Erinaceus_europaeus
ENSCHIG00000015395	TRMT13	97	54.681	ENSELUG00000003803	trmt13	99	54.989	Esox_lucius
ENSCHIG00000015395	TRMT13	100	93.139	ENSFCAG00000030618	TRMT13	100	93.139	Felis_catus
ENSCHIG00000015395	TRMT13	99	65.690	ENSFALG00000002424	TRMT13	99	65.690	Ficedula_albicollis
ENSCHIG00000015395	TRMT13	99	89.474	ENSFDAG00000006342	TRMT13	98	89.474	Fukomys_damarensis
ENSCHIG00000015395	TRMT13	78	52.320	ENSFHEG00000022954	trmt13	97	51.724	Fundulus_heteroclitus
ENSCHIG00000015395	TRMT13	95	48.571	ENSGMOG00000013223	trmt13	100	49.011	Gadus_morhua
ENSCHIG00000015395	TRMT13	95	67.033	ENSGALG00000005290	TRMT13	98	66.030	Gallus_gallus
ENSCHIG00000015395	TRMT13	77	49.869	ENSGAFG00000001577	trmt13	83	49.869	Gambusia_affinis
ENSCHIG00000015395	TRMT13	98	49.480	ENSGACG00000013428	trmt13	97	50.855	Gasterosteus_aculeatus
ENSCHIG00000015395	TRMT13	100	70.539	ENSGAGG00000023303	TRMT13	99	75.636	Gopherus_agassizii
ENSCHIG00000015395	TRMT13	100	90.644	ENSGGOG00000005616	TRMT13	100	90.644	Gorilla_gorilla
ENSCHIG00000015395	TRMT13	96	54.219	ENSHBUG00000007754	trmt13	99	54.219	Haplochromis_burtoni
ENSCHIG00000015395	TRMT13	99	89.053	ENSHGLG00000002164	TRMT13	98	89.053	Heterocephalus_glaber_female
ENSCHIG00000015395	TRMT13	99	89.053	ENSHGLG00100001618	TRMT13	98	89.053	Heterocephalus_glaber_male
ENSCHIG00000015395	TRMT13	96	48.380	ENSHCOG00000020553	trmt13	97	48.380	Hippocampus_comes
ENSCHIG00000015395	TRMT13	98	54.797	ENSIPUG00000024787	trmt13	99	54.968	Ictalurus_punctatus
ENSCHIG00000015395	TRMT13	99	91.042	ENSSTOG00000013483	TRMT13	100	91.042	Ictidomys_tridecemlineatus
ENSCHIG00000015395	TRMT13	100	86.071	ENSJJAG00000018012	Trmt13	100	86.071	Jaculus_jaculus
ENSCHIG00000015395	TRMT13	63	49.511	ENSKMAG00000007639	trmt13	92	49.511	Kryptolebias_marmoratus
ENSCHIG00000015395	TRMT13	96	50.000	ENSLBEG00000020238	trmt13	99	50.312	Labrus_bergylta
ENSCHIG00000015395	TRMT13	98	60.759	ENSLACG00000013153	TRMT13	99	60.759	Latimeria_chalumnae
ENSCHIG00000015395	TRMT13	96	58.658	ENSLOCG00000000418	trmt13	97	59.052	Lepisosteus_oculatus
ENSCHIG00000015395	TRMT13	77	88.378	ENSLAFG00000002383	TRMT13	100	88.378	Loxodonta_africana
ENSCHIG00000015395	TRMT13	100	90.852	ENSMFAG00000034681	TRMT13	100	90.852	Macaca_fascicularis
ENSCHIG00000015395	TRMT13	100	90.852	ENSMMUG00000004243	TRMT13	100	90.852	Macaca_mulatta
ENSCHIG00000015395	TRMT13	100	90.852	ENSMNEG00000036102	TRMT13	100	90.852	Macaca_nemestrina
ENSCHIG00000015395	TRMT13	100	90.437	ENSMLEG00000034258	TRMT13	100	90.437	Mandrillus_leucophaeus
ENSCHIG00000015395	TRMT13	96	51.050	ENSMAMG00000016597	trmt13	98	51.050	Mastacembelus_armatus
ENSCHIG00000015395	TRMT13	96	53.586	ENSMZEG00005020959	trmt13	99	53.586	Maylandia_zebra
ENSCHIG00000015395	TRMT13	89	66.511	ENSMGAG00000006970	TRMT13	100	66.511	Meleagris_gallopavo
ENSCHIG00000015395	TRMT13	99	83.542	ENSMAUG00000010448	Trmt13	99	83.542	Mesocricetus_auratus
ENSCHIG00000015395	TRMT13	100	91.060	ENSMICG00000005283	TRMT13	100	91.060	Microcebus_murinus
ENSCHIG00000015395	TRMT13	99	81.250	ENSMOCG00000019914	Trmt13	99	81.250	Microtus_ochrogaster
ENSCHIG00000015395	TRMT13	54	51.685	ENSMMOG00000007762	trmt13	90	51.685	Mola_mola
ENSCHIG00000015395	TRMT13	100	77.572	ENSMODG00000003646	TRMT13	100	77.572	Monodelphis_domestica
ENSCHIG00000015395	TRMT13	99	50.104	ENSMALG00000020965	trmt13	99	50.104	Monopterus_albus
ENSCHIG00000015395	TRMT13	99	84.421	MGP_CAROLIEiJ_G0025568	Trmt13	94	91.071	Mus_caroli
ENSCHIG00000015395	TRMT13	99	84.100	ENSMUSG00000033439	Trmt13	94	91.071	Mus_musculus
ENSCHIG00000015395	TRMT13	99	84.519	MGP_PahariEiJ_G0027014	Trmt13	93	91.566	Mus_pahari
ENSCHIG00000015395	TRMT13	99	84.310	MGP_SPRETEiJ_G0026518	Trmt13	94	91.071	Mus_spretus
ENSCHIG00000015395	TRMT13	79	89.501	ENSMPUG00000002078	-	100	89.501	Mustela_putorius_furo
ENSCHIG00000015395	TRMT13	100	79.626	ENSMLUG00000002124	TRMT13	100	79.626	Myotis_lucifugus
ENSCHIG00000015395	TRMT13	99	48.454	ENSNBRG00000006783	trmt13	95	50.216	Neolamprologus_brichardi
ENSCHIG00000015395	TRMT13	100	90.437	ENSNLEG00000035917	TRMT13	100	90.437	Nomascus_leucogenys
ENSCHIG00000015395	TRMT13	51	75.403	ENSMEUG00000013346	-	100	75.403	Notamacropus_eugenii
ENSCHIG00000015395	TRMT13	67	89.338	ENSOPRG00000012048	TRMT13	67	89.338	Ochotona_princeps
ENSCHIG00000015395	TRMT13	98	52.075	ENSONIG00000004574	trmt13	99	53.797	Oreochromis_niloticus
ENSCHIG00000015395	TRMT13	89	72.854	ENSOANG00000012057	TRMT13	99	72.854	Ornithorhynchus_anatinus
ENSCHIG00000015395	TRMT13	99	89.583	ENSOCUG00000023095	TRMT13	100	89.583	Oryctolagus_cuniculus
ENSCHIG00000015395	TRMT13	96	48.203	ENSORLG00000003320	trmt13	99	48.837	Oryzias_latipes
ENSCHIG00000015395	TRMT13	96	48.827	ENSORLG00020005972	trmt13	98	48.852	Oryzias_latipes_hni
ENSCHIG00000015395	TRMT13	96	51.055	ENSORLG00015002270	trmt13	99	51.805	Oryzias_latipes_hsok
ENSCHIG00000015395	TRMT13	98	51.363	ENSOMEG00000006724	trmt13	95	51.782	Oryzias_melastigma
ENSCHIG00000015395	TRMT13	98	91.332	ENSOGAG00000005618	TRMT13	97	90.852	Otolemur_garnettii
ENSCHIG00000015395	TRMT13	100	100.000	ENSOARG00000017983	TRMT13	100	100.000	Ovis_aries
ENSCHIG00000015395	TRMT13	100	90.229	ENSPPAG00000043736	TRMT13	100	90.229	Pan_paniscus
ENSCHIG00000015395	TRMT13	100	93.347	ENSPPRG00000003424	TRMT13	100	93.347	Panthera_pardus
ENSCHIG00000015395	TRMT13	100	93.347	ENSPTIG00000018598	TRMT13	100	93.347	Panthera_tigris_altaica
ENSCHIG00000015395	TRMT13	100	90.229	ENSPTRG00000001001	TRMT13	100	90.229	Pan_troglodytes
ENSCHIG00000015395	TRMT13	100	91.060	ENSPANG00000007598	TRMT13	100	91.367	Papio_anubis
ENSCHIG00000015395	TRMT13	97	54.721	ENSPKIG00000001514	trmt13	99	54.721	Paramormyrops_kingsleyae
ENSCHIG00000015395	TRMT13	86	70.504	ENSPSIG00000012703	TRMT13	99	70.504	Pelodiscus_sinensis
ENSCHIG00000015395	TRMT13	98	51.586	ENSPMGG00000013298	trmt13	95	51.586	Periophthalmus_magnuspinnatus
ENSCHIG00000015395	TRMT13	99	81.875	ENSPEMG00000000275	Trmt13	99	81.875	Peromyscus_maniculatus_bairdii
ENSCHIG00000015395	TRMT13	95	46.025	ENSPMAG00000000823	trmt13	100	45.418	Petromyzon_marinus
ENSCHIG00000015395	TRMT13	99	77.547	ENSPCIG00000007699	TRMT13	99	78.170	Phascolarctos_cinereus
ENSCHIG00000015395	TRMT13	99	48.434	ENSPFOG00000008675	trmt13	99	48.434	Poecilia_formosa
ENSCHIG00000015395	TRMT13	96	48.203	ENSPLAG00000009709	trmt13	99	48.203	Poecilia_latipinna
ENSCHIG00000015395	TRMT13	96	47.034	ENSPMEG00000022954	trmt13	99	47.034	Poecilia_mexicana
ENSCHIG00000015395	TRMT13	80	49.495	ENSPREG00000005645	trmt13	92	50.896	Poecilia_reticulata
ENSCHIG00000015395	TRMT13	100	90.229	ENSPPYG00000001120	TRMT13	100	90.229	Pongo_abelii
ENSCHIG00000015395	TRMT13	100	87.318	ENSPCAG00000002340	TRMT13	100	87.318	Procavia_capensis
ENSCHIG00000015395	TRMT13	100	90.229	ENSPCOG00000017984	TRMT13	100	90.229	Propithecus_coquereli
ENSCHIG00000015395	TRMT13	100	91.892	ENSPVAG00000017430	TRMT13	100	91.892	Pteropus_vampyrus
ENSCHIG00000015395	TRMT13	96	52.321	ENSPNYG00000013690	trmt13	99	52.321	Pundamilia_nyererei
ENSCHIG00000015395	TRMT13	96	54.701	ENSPNAG00000022130	trmt13	98	54.701	Pygocentrus_nattereri
ENSCHIG00000015395	TRMT13	99	84.310	ENSRNOG00000015140	Trmt13	96	84.310	Rattus_norvegicus
ENSCHIG00000015395	TRMT13	100	90.852	ENSRBIG00000037686	TRMT13	100	90.852	Rhinopithecus_bieti
ENSCHIG00000015395	TRMT13	100	90.852	ENSRROG00000044057	TRMT13	100	90.852	Rhinopithecus_roxellana
ENSCHIG00000015395	TRMT13	100	90.229	ENSSBOG00000026541	TRMT13	100	90.229	Saimiri_boliviensis_boliviensis
ENSCHIG00000015395	TRMT13	91	78.490	ENSSHAG00000005213	TRMT13	97	78.490	Sarcophilus_harrisii
ENSCHIG00000015395	TRMT13	98	52.542	ENSSFOG00015017560	trmt13	99	53.178	Scleropages_formosus
ENSCHIG00000015395	TRMT13	99	49.390	ENSSMAG00000014592	trmt13	99	49.390	Scophthalmus_maximus
ENSCHIG00000015395	TRMT13	96	50.000	ENSSDUG00000015508	trmt13	97	49.692	Seriola_dumerili
ENSCHIG00000015395	TRMT13	98	50.308	ENSSLDG00000019060	trmt13	97	50.308	Seriola_lalandi_dorsalis
ENSCHIG00000015395	TRMT13	99	77.197	ENSSARG00000010344	TRMT13	99	77.197	Sorex_araneus
ENSCHIG00000015395	TRMT13	96	67.819	ENSSPUG00000016339	TRMT13	100	67.819	Sphenodon_punctatus
ENSCHIG00000015395	TRMT13	95	52.463	ENSSPAG00000011922	trmt13	98	52.442	Stegastes_partitus
ENSCHIG00000015395	TRMT13	100	93.347	ENSSSCG00000006869	TRMT13	100	93.347	Sus_scrofa
ENSCHIG00000015395	TRMT13	97	66.453	ENSTGUG00000005253	TRMT13	100	66.453	Taeniopygia_guttata
ENSCHIG00000015395	TRMT13	97	50.000	ENSTRUG00000008400	trmt13	99	50.000	Takifugu_rubripes
ENSCHIG00000015395	TRMT13	86	74.519	ENSTBEG00000008911	TRMT13	100	74.519	Tupaia_belangeri
ENSCHIG00000015395	TRMT13	51	95.238	ENSTTRG00000015302	-	60	95.238	Tursiops_truncatus
ENSCHIG00000015395	TRMT13	100	85.447	ENSUAMG00000017251	TRMT13	100	85.447	Ursus_americanus
ENSCHIG00000015395	TRMT13	100	91.060	ENSUMAG00000007901	TRMT13	99	92.130	Ursus_maritimus
ENSCHIG00000015395	TRMT13	90	75.406	ENSVPAG00000001034	TRMT13	100	75.406	Vicugna_pacos
ENSCHIG00000015395	TRMT13	99	92.308	ENSVVUG00000021996	TRMT13	99	92.308	Vulpes_vulpes
ENSCHIG00000015395	TRMT13	97	57.479	ENSXETG00000013204	trmt13	97	57.479	Xenopus_tropicalis
ENSCHIG00000015395	TRMT13	96	47.368	ENSXMAG00000010765	trmt13	99	47.368	Xiphophorus_maculatus