EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000015589 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 5B-like
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 3048 bases
Position: chr18:65104770-65107817
Accession: 102169898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000014629	zf-C2H2	PF00096.26	1.1e-21	1	4
ENSCHIP00000014629	zf-C2H2	PF00096.26	1.1e-21	2	4
ENSCHIP00000014629	zf-C2H2	PF00096.26	1.1e-21	3	4
ENSCHIP00000014629	zf-C2H2	PF00096.26	1.1e-21	4	4
ENSCHIP00000014629	zf-met	PF12874.7	5.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000022428	-	1080	XM_005692993	ENSCHIP00000014629	359 (aa)	XP_005693050	UPI000D195A77

Gene Model

Click here to download ENSCHIG00000015589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000015589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000015589	-	54	50.000	ENSCHIG00000015741	-	90	50.000
ENSCHIG00000015589	-	100	75.591	ENSCHIG00000014993	-	83	75.591
ENSCHIG00000015589	-	100	75.328	ENSCHIG00000024202	-	83	75.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000015589	-	100	46.265	ENSDNOG00000010100	-	83	46.265	Dasypus_novemcinctus
ENSCHIG00000015589	-	100	50.000	ENSEASG00005020480	-	82	50.000	Equus_asinus_asinus
ENSCHIG00000015589	-	100	49.184	ENSECAG00000006782	-	83	49.184	Equus_caballus
ENSCHIG00000015589	-	100	51.106	ENSFCAG00000041174	-	85	51.106	Felis_catus
ENSCHIG00000015589	-	100	38.660	ENSMAUG00000015051	Zscan5b	84	38.660	Mesocricetus_auratus
ENSCHIG00000015589	-	100	45.388	ENSMPUG00000006686	-	83	45.388	Mustela_putorius_furo
ENSCHIG00000015589	-	100	44.976	ENSMLUG00000029894	-	90	44.976	Myotis_lucifugus
ENSCHIG00000015589	-	99	44.318	ENSMLUG00000024124	-	82	44.175	Myotis_lucifugus
ENSCHIG00000015589	-	99	44.318	ENSMLUG00000006448	-	84	42.051	Myotis_lucifugus
ENSCHIG00000015589	-	100	41.606	ENSOGAG00000011347	-	82	41.606	Otolemur_garnettii
ENSCHIG00000015589	-	100	41.223	ENSOGAG00000026429	-	82	40.602	Otolemur_garnettii
ENSCHIG00000015589	-	100	50.860	ENSPTIG00000015051	-	85	50.860	Panthera_tigris_altaica
ENSCHIG00000015589	-	100	45.742	ENSPVAG00000017654	-	84	45.742	Pteropus_vampyrus
ENSCHIG00000015589	-	71	61.151	ENSVPAG00000002606	-	98	61.151	Vicugna_pacos