EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000015645 (Gene tree)
Gene ID: 102169051
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 76312 bases
Position: chr1:1567038-1643349
Accession: 102169051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000014731	Npa1	PF11707.8	1.2e-87	1	1
ENSCHIP00000014772	Npa1	PF11707.8	1.2e-87	1	1
ENSCHIP00000014753	Npa1	PF11707.8	1.3e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000022530	URB1-201	6810	XM_018047870	ENSCHIP00000014731	2269 (aa)	XP_017903359	UPI000847C61B
ENSCHIT00000022552	URB1-202	6666	-	ENSCHIP00000014753	2221 (aa)	-	UPI000D191F89
ENSCHIT00000022571	URB1-203	6834	-	ENSCHIP00000014772	2277 (aa)	-	UPI000D190E34

Gene Model

Click here to download ENSCHIG00000015645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000015645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000015645	URB1	99	77.299	ENSG00000142207	URB1	99	77.071	Homo_sapiens
ENSCHIG00000015645	URB1	99	42.367	ENSAPOG00000020308	urb1	99	42.455	Acanthochromis_polyacanthus
ENSCHIG00000015645	URB1	99	78.982	ENSAMEG00000011998	URB1	99	78.982	Ailuropoda_melanoleuca
ENSCHIG00000015645	URB1	94	44.378	ENSACIG00000003248	urb1	97	44.104	Amphilophus_citrinellus
ENSCHIG00000015645	URB1	99	40.200	ENSAOCG00000010364	urb1	99	40.331	Amphiprion_ocellaris
ENSCHIG00000015645	URB1	99	41.768	ENSAPEG00000010758	urb1	99	41.899	Amphiprion_percula
ENSCHIG00000015645	URB1	99	43.272	ENSATEG00000011790	urb1	99	43.261	Anabas_testudineus
ENSCHIG00000015645	URB1	97	55.140	ENSAPLG00000012791	URB1	99	55.095	Anas_platyrhynchos
ENSCHIG00000015645	URB1	99	51.543	ENSACAG00000002817	URB1	99	51.876	Anolis_carolinensis
ENSCHIG00000015645	URB1	99	77.038	ENSANAG00000024617	URB1	99	76.994	Aotus_nancymaae
ENSCHIG00000015645	URB1	99	44.195	ENSACLG00000024865	urb1	99	43.965	Astatotilapia_calliptera
ENSCHIG00000015645	URB1	99	39.719	ENSAMXG00000012306	urb1	99	39.623	Astyanax_mexicanus
ENSCHIG00000015645	URB1	99	93.342	ENSBTAG00000012412	URB1	99	93.342	Bos_taurus
ENSCHIG00000015645	URB1	99	76.193	ENSCJAG00000009118	URB1	99	76.193	Callithrix_jacchus
ENSCHIG00000015645	URB1	99	80.227	ENSCAFG00000008892	URB1	99	80.227	Canis_familiaris
ENSCHIG00000015645	URB1	99	79.921	ENSCAFG00020025987	-	99	79.912	Canis_lupus_dingo
ENSCHIG00000015645	URB1	99	79.044	ENSCAFG00020025994	-	99	79.035	Canis_lupus_dingo
ENSCHIG00000015645	URB1	99	76.798	ENSTSYG00000013286	URB1	99	76.798	Carlito_syrichta
ENSCHIG00000015645	URB1	98	72.658	ENSCAPG00000015589	URB1	99	72.568	Cavia_aperea
ENSCHIG00000015645	URB1	100	73.772	ENSCPOG00000006748	URB1	100	73.684	Cavia_porcellus
ENSCHIG00000015645	URB1	99	77.159	ENSCCAG00000021299	URB1	99	77.203	Cebus_capucinus
ENSCHIG00000015645	URB1	99	77.028	ENSCATG00000042630	URB1	99	76.984	Cercocebus_atys
ENSCHIG00000015645	URB1	99	75.066	ENSCLAG00000005262	URB1	99	74.934	Chinchilla_lanigera
ENSCHIG00000015645	URB1	99	75.338	ENSCSAG00000009584	URB1	99	75.295	Chlorocebus_sabaeus
ENSCHIG00000015645	URB1	99	57.267	ENSCPBG00000006454	URB1	99	57.180	Chrysemys_picta_bellii
ENSCHIG00000015645	URB1	99	76.721	ENSCANG00000031088	URB1	99	76.677	Colobus_angolensis_palliatus
ENSCHIG00000015645	URB1	98	71.613	ENSCGRG00001010616	Urb1	99	71.491	Cricetulus_griseus_chok1gshd
ENSCHIG00000015645	URB1	98	71.390	ENSCGRG00000015840	Urb1	99	71.345	Cricetulus_griseus_crigri
ENSCHIG00000015645	URB1	99	42.252	ENSCSEG00000012616	urb1	99	42.071	Cynoglossus_semilaevis
ENSCHIG00000015645	URB1	96	54.704	ENSCVAG00000009076	urb1	97	54.704	Cyprinodon_variegatus
ENSCHIG00000015645	URB1	99	42.731	ENSDARG00000060308	urb1	99	42.907	Danio_rerio
ENSCHIG00000015645	URB1	85	77.074	ENSDNOG00000015586	URB1	99	76.971	Dasypus_novemcinctus
ENSCHIG00000015645	URB1	99	73.989	ENSDORG00000006735	Urb1	99	73.902	Dipodomys_ordii
ENSCHIG00000015645	URB1	92	80.581	ENSETEG00000009080	URB1	92	80.581	Echinops_telfairi
ENSCHIG00000015645	URB1	100	78.728	ENSEASG00005007711	URB1	98	83.429	Equus_asinus_asinus
ENSCHIG00000015645	URB1	97	89.330	ENSECAG00000013206	URB1	100	90.000	Equus_caballus
ENSCHIG00000015645	URB1	59	86.667	ENSEEUG00000003626	-	57	86.667	Erinaceus_europaeus
ENSCHIG00000015645	URB1	99	43.712	ENSELUG00000020516	urb1	99	43.879	Esox_lucius
ENSCHIG00000015645	URB1	99	78.850	ENSFCAG00000002177	URB1	99	78.850	Felis_catus
ENSCHIG00000015645	URB1	98	50.725	ENSFALG00000004636	URB1	99	50.637	Ficedula_albicollis
ENSCHIG00000015645	URB1	99	75.219	ENSFDAG00000007288	URB1	95	75.175	Fukomys_damarensis
ENSCHIG00000015645	URB1	99	41.287	ENSFHEG00000000202	urb1	99	41.633	Fundulus_heteroclitus
ENSCHIG00000015645	URB1	92	47.225	ENSGMOG00000001838	urb1	93	47.225	Gadus_morhua
ENSCHIG00000015645	URB1	99	54.775	ENSGALG00000015887	URB1	99	54.688	Gallus_gallus
ENSCHIG00000015645	URB1	91	54.994	ENSGAFG00000020694	urb1	97	54.994	Gambusia_affinis
ENSCHIG00000015645	URB1	99	44.649	ENSGACG00000011703	urb1	99	44.649	Gasterosteus_aculeatus
ENSCHIG00000015645	URB1	99	56.770	ENSGAGG00000022544	URB1	99	56.639	Gopherus_agassizii
ENSCHIG00000015645	URB1	99	77.291	ENSGGOG00000000285	URB1	99	77.203	Gorilla_gorilla
ENSCHIG00000015645	URB1	99	44.195	ENSHBUG00000001904	urb1	99	43.965	Haplochromis_burtoni
ENSCHIG00000015645	URB1	99	73.163	ENSHGLG00000004907	URB1	99	73.077	Heterocephalus_glaber_female
ENSCHIG00000015645	URB1	99	73.774	ENSHGLG00100010749	URB1	100	73.611	Heterocephalus_glaber_male
ENSCHIG00000015645	URB1	73	46.316	ENSHCOG00000018683	urb1	99	47.018	Hippocampus_comes
ENSCHIG00000015645	URB1	99	39.121	ENSIPUG00000014721	urb1	99	39.121	Ictalurus_punctatus
ENSCHIG00000015645	URB1	99	75.898	ENSSTOG00000004539	URB1	99	75.811	Ictidomys_tridecemlineatus
ENSCHIG00000015645	URB1	98	41.807	ENSKMAG00000006001	urb1	97	47.118	Kryptolebias_marmoratus
ENSCHIG00000015645	URB1	93	51.647	ENSLBEG00000027208	urb1	98	51.541	Labrus_bergylta
ENSCHIG00000015645	URB1	99	47.607	ENSLACG00000017059	URB1	100	47.607	Latimeria_chalumnae
ENSCHIG00000015645	URB1	99	45.839	ENSLOCG00000009190	urb1	99	45.684	Lepisosteus_oculatus
ENSCHIG00000015645	URB1	99	74.311	ENSLAFG00000010407	URB1	99	74.223	Loxodonta_africana
ENSCHIG00000015645	URB1	99	76.984	ENSMFAG00000034391	URB1	97	76.896	Macaca_fascicularis
ENSCHIG00000015645	URB1	99	76.852	ENSMMUG00000010295	URB1	99	76.765	Macaca_mulatta
ENSCHIG00000015645	URB1	99	75.723	ENSMNEG00000032981	URB1	99	75.635	Macaca_nemestrina
ENSCHIG00000015645	URB1	99	77.071	ENSMLEG00000041435	URB1	99	77.028	Mandrillus_leucophaeus
ENSCHIG00000015645	URB1	99	42.782	ENSMAMG00000011238	urb1	99	42.650	Mastacembelus_armatus
ENSCHIG00000015645	URB1	99	39.712	ENSMZEG00005011862	urb1	99	39.524	Maylandia_zebra
ENSCHIG00000015645	URB1	98	55.180	ENSMGAG00000014512	URB1	99	55.136	Meleagris_gallopavo
ENSCHIG00000015645	URB1	94	78.102	ENSMAUG00000010516	Urb1	99	78.102	Mesocricetus_auratus
ENSCHIG00000015645	URB1	100	76.512	ENSMICG00000016424	URB1	100	76.468	Microcebus_murinus
ENSCHIG00000015645	URB1	99	70.263	ENSMOCG00000012613	Urb1	99	70.263	Microtus_ochrogaster
ENSCHIG00000015645	URB1	99	61.067	ENSMODG00000021076	URB1	99	61.067	Monodelphis_domestica
ENSCHIG00000015645	URB1	93	51.739	ENSMALG00000017411	urb1	97	51.739	Monopterus_albus
ENSCHIG00000015645	URB1	99	70.333	MGP_CAROLIEiJ_G0020948	Urb1	99	70.245	Mus_caroli
ENSCHIG00000015645	URB1	99	70.372	ENSMUSG00000039929	Urb1	99	70.328	Mus_musculus
ENSCHIG00000015645	URB1	99	70.245	MGP_PahariEiJ_G0016653	Urb1	99	70.070	Mus_pahari
ENSCHIG00000015645	URB1	99	70.171	MGP_SPRETEiJ_G0021854	Urb1	99	70.127	Mus_spretus
ENSCHIG00000015645	URB1	99	78.968	ENSMPUG00000001123	URB1	99	78.968	Mustela_putorius_furo
ENSCHIG00000015645	URB1	99	70.978	ENSNGAG00000001905	Urb1	99	70.978	Nannospalax_galili
ENSCHIG00000015645	URB1	83	44.497	ENSNBRG00000001049	urb1	99	44.497	Neolamprologus_brichardi
ENSCHIG00000015645	URB1	99	75.407	ENSNLEG00000026872	URB1	99	75.362	Nomascus_leucogenys
ENSCHIG00000015645	URB1	96	56.591	ENSMEUG00000010828	URB1	96	57.143	Notamacropus_eugenii
ENSCHIG00000015645	URB1	99	71.032	ENSOPRG00000013482	URB1	99	70.988	Ochotona_princeps
ENSCHIG00000015645	URB1	99	74.222	ENSODEG00000002587	URB1	99	74.134	Octodon_degus
ENSCHIG00000015645	URB1	99	44.274	ENSONIG00000005599	urb1	99	44.274	Oreochromis_niloticus
ENSCHIG00000015645	URB1	99	75.550	ENSOCUG00000009381	URB1	99	75.462	Oryctolagus_cuniculus
ENSCHIG00000015645	URB1	99	43.114	ENSORLG00000003429	urb1	99	43.114	Oryzias_latipes
ENSCHIG00000015645	URB1	99	42.951	ENSORLG00020013785	urb1	99	42.951	Oryzias_latipes_hni
ENSCHIG00000015645	URB1	99	41.277	ENSORLG00015019421	urb1	97	45.657	Oryzias_latipes_hsok
ENSCHIG00000015645	URB1	77	51.176	ENSOMEG00000002094	urb1	98	51.176	Oryzias_melastigma
ENSCHIG00000015645	URB1	99	75.746	ENSOGAG00000017140	URB1	100	75.658	Otolemur_garnettii
ENSCHIG00000015645	URB1	97	92.027	ENSOARG00000013679	URB1	99	91.942	Ovis_aries
ENSCHIG00000015645	URB1	99	77.291	ENSPPAG00000003423	URB1	99	77.203	Pan_paniscus
ENSCHIG00000015645	URB1	99	78.894	ENSPPRG00000023131	URB1	99	78.894	Panthera_pardus
ENSCHIG00000015645	URB1	92	78.585	ENSPTIG00000016125	URB1	98	78.585	Panthera_tigris_altaica
ENSCHIG00000015645	URB1	99	77.159	ENSPTRG00000013852	URB1	99	77.071	Pan_troglodytes
ENSCHIG00000015645	URB1	99	77.115	ENSPANG00000021964	URB1	99	77.071	Papio_anubis
ENSCHIG00000015645	URB1	97	46.930	ENSPKIG00000003683	urb1	96	46.998	Paramormyrops_kingsleyae
ENSCHIG00000015645	URB1	100	71.379	ENSPEMG00000021205	Urb1	99	71.379	Peromyscus_maniculatus_bairdii
ENSCHIG00000015645	URB1	71	36.192	ENSPMAG00000009733	URB1	99	35.224	Petromyzon_marinus
ENSCHIG00000015645	URB1	99	61.659	ENSPCIG00000016350	URB1	100	61.700	Phascolarctos_cinereus
ENSCHIG00000015645	URB1	96	43.115	ENSPLAG00000004371	urb1	99	43.115	Poecilia_latipinna
ENSCHIG00000015645	URB1	99	43.663	ENSPMEG00000006634	urb1	99	43.663	Poecilia_mexicana
ENSCHIG00000015645	URB1	98	43.975	ENSPREG00000013453	urb1	98	43.975	Poecilia_reticulata
ENSCHIG00000015645	URB1	99	77.025	ENSPPYG00000011359	URB1	99	76.798	Pongo_abelii
ENSCHIG00000015645	URB1	99	65.641	ENSPCAG00000007430	URB1	99	65.495	Procavia_capensis
ENSCHIG00000015645	URB1	99	77.193	ENSPCOG00000022695	URB1	99	77.544	Propithecus_coquereli
ENSCHIG00000015645	URB1	99	77.480	ENSPVAG00000000889	URB1	99	77.480	Pteropus_vampyrus
ENSCHIG00000015645	URB1	99	42.945	ENSPNYG00000010589	urb1	99	42.682	Pundamilia_nyererei
ENSCHIG00000015645	URB1	99	40.175	ENSPNAG00000019324	urb1	99	39.956	Pygocentrus_nattereri
ENSCHIG00000015645	URB1	99	70.609	ENSRNOG00000002080	Urb1	99	70.653	Rattus_norvegicus
ENSCHIG00000015645	URB1	99	76.458	ENSRBIG00000033122	URB1	99	76.370	Rhinopithecus_bieti
ENSCHIG00000015645	URB1	99	76.414	ENSRROG00000040237	URB1	99	76.326	Rhinopithecus_roxellana
ENSCHIG00000015645	URB1	99	77.344	ENSSBOG00000027672	URB1	99	77.301	Saimiri_boliviensis_boliviensis
ENSCHIG00000015645	URB1	99	60.794	ENSSHAG00000005140	URB1	100	60.794	Sarcophilus_harrisii
ENSCHIG00000015645	URB1	93	46.620	ENSSFOG00015000339	urb1	99	46.335	Scleropages_formosus
ENSCHIG00000015645	URB1	99	43.850	ENSSMAG00000003782	urb1	99	43.976	Scophthalmus_maximus
ENSCHIG00000015645	URB1	99	44.715	ENSSDUG00000012313	urb1	99	44.696	Seriola_dumerili
ENSCHIG00000015645	URB1	99	44.522	ENSSLDG00000023179	urb1	99	44.522	Seriola_lalandi_dorsalis
ENSCHIG00000015645	URB1	99	53.443	ENSSPUG00000012447	URB1	100	53.602	Sphenodon_punctatus
ENSCHIG00000015645	URB1	99	43.416	ENSSPAG00000006325	urb1	99	43.546	Stegastes_partitus
ENSCHIG00000015645	URB1	99	81.674	ENSSSCG00000032024	URB1	99	81.674	Sus_scrofa
ENSCHIG00000015645	URB1	75	56.615	ENSTGUG00000013442	URB1	100	56.615	Taeniopygia_guttata
ENSCHIG00000015645	URB1	99	42.989	ENSTRUG00000009372	urb1	98	42.737	Takifugu_rubripes
ENSCHIG00000015645	URB1	99	42.387	ENSTNIG00000016277	urb1	99	42.249	Tetraodon_nigroviridis
ENSCHIG00000015645	URB1	81	78.261	ENSTBEG00000010044	URB1	81	78.261	Tupaia_belangeri
ENSCHIG00000015645	URB1	91	84.631	ENSTTRG00000007712	URB1	92	84.631	Tursiops_truncatus
ENSCHIG00000015645	URB1	99	79.289	ENSUAMG00000012231	URB1	99	79.289	Ursus_americanus
ENSCHIG00000015645	URB1	91	80.967	ENSUMAG00000017419	URB1	97	80.967	Ursus_maritimus
ENSCHIG00000015645	URB1	69	91.667	ENSVPAG00000001164	URB1	68	91.667	Vicugna_pacos
ENSCHIG00000015645	URB1	99	79.632	ENSVVUG00000000551	URB1	99	79.623	Vulpes_vulpes
ENSCHIG00000015645	URB1	99	49.376	ENSXETG00000009895	urb1	99	49.397	Xenopus_tropicalis
ENSCHIG00000015645	URB1	99	41.102	ENSXCOG00000005500	urb1	99	41.102	Xiphophorus_couchianus
ENSCHIG00000015645	URB1	99	41.068	ENSXMAG00000007253	urb1	99	41.068	Xiphophorus_maculatus