EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000016052 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 524 bases
Position: chr28:14492721-14493244
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000015377	Nucleoplasmin	PF03066.15	2.2e-17	1	1
ENSCHIP00000015373	Nucleoplasmin	PF03066.15	2.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000023179	-	471	-	ENSCHIP00000015377	156 (aa)	-	UPI000D1939DD
ENSCHIT00000023175	-	480	-	ENSCHIP00000015373	159 (aa)	-	UPI000D190D01

Gene Model

Click here to download ENSCHIG00000016052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000016052	-	99	60.571	ENSCHIG00000024055	-	99	60.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016052	-	92	62.048	ENSG00000107833	NPM3	99	61.364	Homo_sapiens
ENSCHIG00000016052	-	65	36.607	ENSAPOG00000013083	npm3	90	31.757	Acanthochromis_polyacanthus
ENSCHIG00000016052	-	84	57.718	ENSAMEG00000019414	-	88	60.403	Ailuropoda_melanoleuca
ENSCHIG00000016052	-	92	63.636	ENSAMEG00000017639	-	99	62.857	Ailuropoda_melanoleuca
ENSCHIG00000016052	-	62	37.736	ENSACIG00000022586	npm3	82	33.835	Amphilophus_citrinellus
ENSCHIG00000016052	-	65	36.607	ENSAOCG00000009376	npm3	90	33.562	Amphiprion_ocellaris
ENSCHIG00000016052	-	65	36.607	ENSAPEG00000015863	npm3	90	33.562	Amphiprion_percula
ENSCHIG00000016052	-	61	38.095	ENSATEG00000022752	npm3	91	32.886	Anabas_testudineus
ENSCHIG00000016052	-	87	46.405	ENSAPLG00000010935	NPM3	99	46.405	Anas_platyrhynchos
ENSCHIG00000016052	-	83	42.857	ENSACAG00000011936	NPM3	93	42.857	Anolis_carolinensis
ENSCHIG00000016052	-	92	63.855	ENSANAG00000027082	-	99	63.068	Aotus_nancymaae
ENSCHIG00000016052	-	82	64.583	ENSANAG00000023832	-	68	64.583	Aotus_nancymaae
ENSCHIG00000016052	-	77	61.194	ENSANAG00000023070	-	95	54.140	Aotus_nancymaae
ENSCHIG00000016052	-	99	56.548	ENSANAG00000033290	-	99	56.548	Aotus_nancymaae
ENSCHIG00000016052	-	68	36.975	ENSACLG00000007854	npm3	93	31.788	Astatotilapia_calliptera
ENSCHIG00000016052	-	58	40.594	ENSAMXG00000039828	npm3	74	35.862	Astyanax_mexicanus
ENSCHIG00000016052	-	95	60.119	ENSBTAG00000016335	NPM3	99	60.571	Bos_taurus
ENSCHIG00000016052	-	99	60.795	ENSCJAG00000017650	NPM3	99	60.795	Callithrix_jacchus
ENSCHIG00000016052	-	93	63.030	ENSCAFG00000009919	NPM3	87	63.429	Canis_familiaris
ENSCHIG00000016052	-	93	63.030	ENSCAFG00020009185	NPM3	99	63.429	Canis_lupus_dingo
ENSCHIG00000016052	-	67	47.273	ENSCAPG00000016606	NPM3	56	47.059	Cavia_aperea
ENSCHIG00000016052	-	92	60.645	ENSCPOG00000006301	NPM3	99	58.824	Cavia_porcellus
ENSCHIG00000016052	-	92	62.651	ENSCCAG00000031043	-	99	61.932	Cebus_capucinus
ENSCHIG00000016052	-	99	56.000	ENSCCAG00000029457	-	99	56.571	Cebus_capucinus
ENSCHIG00000016052	-	92	62.651	ENSCATG00000013755	NPM3	99	61.932	Cercocebus_atys
ENSCHIG00000016052	-	92	62.651	ENSCSAG00000005509	NPM3	99	61.932	Chlorocebus_sabaeus
ENSCHIG00000016052	-	96	46.012	ENSCPBG00000003817	NPM3	99	46.012	Chrysemys_picta_bellii
ENSCHIG00000016052	-	92	63.030	ENSCANG00000020300	NPM3	99	62.286	Colobus_angolensis_palliatus
ENSCHIG00000016052	-	92	56.442	ENSCGRG00001013345	Npm3	99	57.225	Cricetulus_griseus_chok1gshd
ENSCHIG00000016052	-	77	57.037	ENSCGRG00000015351	Npm3	85	56.934	Cricetulus_griseus_crigri
ENSCHIG00000016052	-	61	40.000	ENSDARG00000103594	npm3	88	31.469	Danio_rerio
ENSCHIG00000016052	-	94	61.677	ENSDORG00000003491	Npm3	99	61.494	Dipodomys_ordii
ENSCHIG00000016052	-	92	58.434	ENSETEG00000006307	NPM3	99	58.523	Echinops_telfairi
ENSCHIG00000016052	-	92	62.424	ENSEASG00005008834	NPM3	99	62.286	Equus_asinus_asinus
ENSCHIG00000016052	-	92	62.424	ENSECAG00000007524	NPM3	99	62.286	Equus_caballus
ENSCHIG00000016052	-	62	37.615	ENSELUG00000021730	npm3	88	32.867	Esox_lucius
ENSCHIG00000016052	-	92	64.634	ENSFCAG00000007178	NPM3	99	63.218	Felis_catus
ENSCHIG00000016052	-	81	44.138	ENSFALG00000008586	NPM3	89	44.366	Ficedula_albicollis
ENSCHIG00000016052	-	60	60.577	ENSFDAG00000016537	NPM3	84	64.773	Fukomys_damarensis
ENSCHIG00000016052	-	64	34.821	ENSFHEG00000003983	npm3	91	33.566	Fundulus_heteroclitus
ENSCHIG00000016052	-	77	34.815	ENSGMOG00000004317	npm3	91	34.058	Gadus_morhua
ENSCHIG00000016052	-	80	41.844	ENSGALG00000032329	NPM3	95	42.553	Gallus_gallus
ENSCHIG00000016052	-	60	38.462	ENSGAFG00000009135	npm3	89	30.556	Gambusia_affinis
ENSCHIG00000016052	-	63	38.182	ENSGACG00000007294	npm3	91	31.410	Gasterosteus_aculeatus
ENSCHIG00000016052	-	88	49.020	ENSGAGG00000004081	NPM3	88	49.020	Gopherus_agassizii
ENSCHIG00000016052	-	92	61.446	ENSGGOG00000027500	NPM3	99	60.795	Gorilla_gorilla
ENSCHIG00000016052	-	67	36.522	ENSHBUG00000023704	npm3	93	32.886	Haplochromis_burtoni
ENSCHIG00000016052	-	90	61.688	ENSHGLG00000019118	NPM3	97	60.366	Heterocephalus_glaber_female
ENSCHIG00000016052	-	74	63.200	ENSHGLG00100010926	NPM3	97	63.200	Heterocephalus_glaber_male
ENSCHIG00000016052	-	65	33.628	ENSHCOG00000019322	npm3	67	30.088	Hippocampus_comes
ENSCHIG00000016052	-	77	35.338	ENSIPUG00000008204	npm3	87	36.029	Ictalurus_punctatus
ENSCHIG00000016052	-	99	61.143	ENSSTOG00000022621	NPM3	99	61.143	Ictidomys_tridecemlineatus
ENSCHIG00000016052	-	99	60.000	ENSJJAG00000018907	Npm3	99	60.000	Jaculus_jaculus
ENSCHIG00000016052	-	67	38.261	ENSKMAG00000020800	npm3	70	37.815	Kryptolebias_marmoratus
ENSCHIG00000016052	-	67	37.391	ENSLBEG00000015651	npm3	91	34.694	Labrus_bergylta
ENSCHIG00000016052	-	91	38.312	ENSLOCG00000000705	-	94	36.364	Lepisosteus_oculatus
ENSCHIG00000016052	-	98	57.988	ENSLAFG00000023022	NPM3	99	60.571	Loxodonta_africana
ENSCHIG00000016052	-	92	62.651	ENSMFAG00000041878	NPM3	99	61.932	Macaca_fascicularis
ENSCHIG00000016052	-	92	62.048	ENSMMUG00000015774	NPM3	99	61.364	Macaca_mulatta
ENSCHIG00000016052	-	92	62.651	ENSMNEG00000039999	NPM3	99	61.932	Macaca_nemestrina
ENSCHIG00000016052	-	92	62.651	ENSMLEG00000038129	NPM3	99	61.932	Mandrillus_leucophaeus
ENSCHIG00000016052	-	85	33.333	ENSMAMG00000002698	npm3	93	33.987	Mastacembelus_armatus
ENSCHIG00000016052	-	68	36.975	ENSMZEG00005003091	npm3	93	32.000	Maylandia_zebra
ENSCHIG00000016052	-	92	57.055	ENSMAUG00000015218	Npm3	98	57.225	Mesocricetus_auratus
ENSCHIG00000016052	-	92	63.636	ENSMICG00000044119	NPM3	99	62.857	Microcebus_murinus
ENSCHIG00000016052	-	92	58.750	ENSMOCG00000013601	Npm3	99	58.824	Microtus_ochrogaster
ENSCHIG00000016052	-	65	35.714	ENSMMOG00000010681	npm3	91	31.081	Mola_mola
ENSCHIG00000016052	-	98	52.023	ENSMODG00000011689	NPM3	98	52.023	Monodelphis_domestica
ENSCHIG00000016052	-	67	32.773	ENSMALG00000016787	npm3	68	31.304	Monopterus_albus
ENSCHIG00000016052	-	92	57.669	MGP_CAROLIEiJ_G0023020	Npm3	99	57.803	Mus_caroli
ENSCHIG00000016052	-	92	57.669	ENSMUSG00000056209	Npm3	99	57.803	Mus_musculus
ENSCHIG00000016052	-	92	57.407	MGP_PahariEiJ_G0014510	Npm3	99	58.140	Mus_pahari
ENSCHIG00000016052	-	92	57.669	MGP_SPRETEiJ_G0023941	Npm3	99	57.803	Mus_spretus
ENSCHIG00000016052	-	92	62.424	ENSMPUG00000016894	NPM3	99	61.714	Mustela_putorius_furo
ENSCHIG00000016052	-	92	60.248	ENSMLUG00000004961	NPM3	91	60.248	Myotis_lucifugus
ENSCHIG00000016052	-	92	59.756	ENSNGAG00000022833	-	99	59.770	Nannospalax_galili
ENSCHIG00000016052	-	92	60.510	ENSNGAG00000000155	-	99	58.683	Nannospalax_galili
ENSCHIG00000016052	-	92	62.651	ENSNLEG00000029281	-	99	61.932	Nomascus_leucogenys
ENSCHIG00000016052	-	92	60.241	ENSNLEG00000018637	-	99	59.659	Nomascus_leucogenys
ENSCHIG00000016052	-	63	59.259	ENSMEUG00000003465	-	90	56.452	Notamacropus_eugenii
ENSCHIG00000016052	-	51	57.647	ENSMEUG00000004931	-	91	57.647	Notamacropus_eugenii
ENSCHIG00000016052	-	57	52.525	ENSMEUG00000002619	-	100	52.525	Notamacropus_eugenii
ENSCHIG00000016052	-	93	59.639	ENSOPRG00000009229	NPM3	99	60.000	Ochotona_princeps
ENSCHIG00000016052	-	96	60.000	ENSODEG00000006704	NPM3	99	59.036	Octodon_degus
ENSCHIG00000016052	-	61	33.645	ENSONIG00000009513	npm3	70	30.702	Oreochromis_niloticus
ENSCHIG00000016052	-	93	62.048	ENSOCUG00000016819	NPM3	99	62.286	Oryctolagus_cuniculus
ENSCHIG00000016052	-	67	37.719	ENSORLG00000008492	npm3	91	34.483	Oryzias_latipes
ENSCHIG00000016052	-	67	37.719	ENSORLG00020002450	npm3	91	34.483	Oryzias_latipes_hni
ENSCHIG00000016052	-	67	37.069	ENSORLG00015006856	npm3	91	34.483	Oryzias_latipes_hsok
ENSCHIG00000016052	-	83	33.113	ENSOMEG00000002666	npm3	93	31.788	Oryzias_melastigma
ENSCHIG00000016052	-	92	61.212	ENSOGAG00000010001	NPM3	99	60.571	Otolemur_garnettii
ENSCHIG00000016052	-	99	60.000	ENSOARG00000016916	NPM3	99	60.000	Ovis_aries
ENSCHIG00000016052	-	92	62.048	ENSPPAG00000040517	NPM3	99	61.364	Pan_paniscus
ENSCHIG00000016052	-	92	64.634	ENSPPRG00000012611	-	99	63.218	Panthera_pardus
ENSCHIG00000016052	-	92	64.634	ENSPTIG00000005390	NPM3	99	63.218	Panthera_tigris_altaica
ENSCHIG00000016052	-	92	62.048	ENSPTRG00000002875	NPM3	99	61.364	Pan_troglodytes
ENSCHIG00000016052	-	92	62.651	ENSPANG00000021046	NPM3	99	61.932	Papio_anubis
ENSCHIG00000016052	-	65	39.823	ENSPMGG00000020204	npm3	90	37.162	Periophthalmus_magnuspinnatus
ENSCHIG00000016052	-	92	57.317	ENSPEMG00000007731	Npm3	99	56.897	Peromyscus_maniculatus_bairdii
ENSCHIG00000016052	-	60	38.462	ENSPFOG00000014692	npm3	89	33.103	Poecilia_formosa
ENSCHIG00000016052	-	60	38.462	ENSPLAG00000009956	npm3	89	33.103	Poecilia_latipinna
ENSCHIG00000016052	-	58	38.614	ENSPMEG00000011795	npm3	92	33.577	Poecilia_mexicana
ENSCHIG00000016052	-	60	37.500	ENSPREG00000020765	npm3	89	32.414	Poecilia_reticulata
ENSCHIG00000016052	-	92	61.905	ENSPPYG00000002589	NPM3	86	61.236	Pongo_abelii
ENSCHIG00000016052	-	99	62.286	ENSPCOG00000014704	NPM3	99	62.286	Propithecus_coquereli
ENSCHIG00000016052	-	92	62.424	ENSPVAG00000004038	NPM3	99	61.714	Pteropus_vampyrus
ENSCHIG00000016052	-	68	36.134	ENSPNYG00000009300	npm3	93	31.333	Pundamilia_nyererei
ENSCHIG00000016052	-	92	55.901	ENSRNOG00000017622	Npm3	99	56.140	Rattus_norvegicus
ENSCHIG00000016052	-	78	61.151	ENSRBIG00000042048	-	87	61.151	Rhinopithecus_bieti
ENSCHIG00000016052	-	99	61.143	ENSRBIG00000039086	-	99	61.143	Rhinopithecus_bieti
ENSCHIG00000016052	-	99	61.143	ENSRROG00000029912	NPM3	99	61.143	Rhinopithecus_roxellana
ENSCHIG00000016052	-	88	62.264	ENSSBOG00000027661	NPM3	99	61.538	Saimiri_boliviensis_boliviensis
ENSCHIG00000016052	-	91	50.625	ENSSHAG00000008567	NPM3	98	49.419	Sarcophilus_harrisii
ENSCHIG00000016052	-	66	34.513	ENSSMAG00000003907	npm3	89	31.690	Scophthalmus_maximus
ENSCHIG00000016052	-	65	38.393	ENSSDUG00000022843	npm3	91	34.459	Seriola_dumerili
ENSCHIG00000016052	-	65	38.393	ENSSLDG00000002811	npm3	91	34.459	Seriola_lalandi_dorsalis
ENSCHIG00000016052	-	79	45.070	ENSSPUG00000011875	NPM3	89	45.139	Sphenodon_punctatus
ENSCHIG00000016052	-	66	36.283	ENSSPAG00000002553	npm3	92	32.215	Stegastes_partitus
ENSCHIG00000016052	-	99	60.571	ENSSSCG00000010568	NPM3	99	60.571	Sus_scrofa
ENSCHIG00000016052	-	67	46.957	ENSTGUG00000009948	NPM3	80	49.057	Taeniopygia_guttata
ENSCHIG00000016052	-	84	33.793	ENSTRUG00000011661	npm3	92	34.483	Takifugu_rubripes
ENSCHIG00000016052	-	70	35.537	ENSTNIG00000016518	npm3	69	35.537	Tetraodon_nigroviridis
ENSCHIG00000016052	-	92	64.242	ENSUAMG00000024072	NPM3	72	63.429	Ursus_americanus
ENSCHIG00000016052	-	92	64.242	ENSUMAG00000023016	NPM3	72	63.429	Ursus_maritimus
ENSCHIG00000016052	-	92	63.415	ENSVPAG00000003120	NPM3	99	62.644	Vicugna_pacos
ENSCHIG00000016052	-	93	63.030	ENSVVUG00000000945	NPM3	87	63.429	Vulpes_vulpes
ENSCHIG00000016052	-	71	37.705	ENSXETG00000014472	npm3	71	34.426	Xenopus_tropicalis
ENSCHIG00000016052	-	68	36.207	ENSXCOG00000012121	npm3	88	30.612	Xiphophorus_couchianus
ENSCHIG00000016052	-	68	36.207	ENSXMAG00000013473	npm3	88	30.612	Xiphophorus_maculatus