EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000016135 (Gene tree)
Gene ID: 102178687
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 6745 bases
Position: chr3:69633627-69640371
Accession: 102178687
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000015530	zf-C2H2	PF00096.26	3.4e-27	1	6
ENSCHIP00000015530	zf-C2H2	PF00096.26	3.4e-27	2	6
ENSCHIP00000015530	zf-C2H2	PF00096.26	3.4e-27	3	6
ENSCHIP00000015530	zf-C2H2	PF00096.26	3.4e-27	4	6
ENSCHIP00000015530	zf-C2H2	PF00096.26	3.4e-27	5	6
ENSCHIP00000015530	zf-C2H2	PF00096.26	3.4e-27	6	6
ENSCHIP00000015530	zf-met	PF12874.7	4.1e-08	1	2
ENSCHIP00000015530	zf-met	PF12874.7	4.1e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000023333	GFI1-201	1263	XM_018045759	ENSCHIP00000015530	420 (aa)	XP_017901248	UPI0005FAE5F8

Gene Model

Click here to download ENSCHIG00000016135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000016135	GFI1	55	41.279	ENSCHIG00000012483	ZNF2	62	46.809
ENSCHIG00000016135	GFI1	53	47.239	ENSCHIG00000022075	ZNF628	50	47.239
ENSCHIG00000016135	GFI1	56	41.071	ENSCHIG00000008992	-	94	41.667
ENSCHIG00000016135	GFI1	51	40.244	ENSCHIG00000023200	ZNF784	70	32.061
ENSCHIG00000016135	GFI1	51	41.860	ENSCHIG00000014415	ZNF81	69	41.860
ENSCHIG00000016135	GFI1	77	45.732	ENSCHIG00000027113	ZNF699	76	45.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016135	GFI1	100	91.943	ENSG00000162676	GFI1	100	91.943	Homo_sapiens
ENSCHIG00000016135	GFI1	100	62.100	ENSAPOG00000015189	gfi1ab	100	61.048	Acanthochromis_polyacanthus
ENSCHIG00000016135	GFI1	100	61.321	ENSACIG00000016354	gfi1ab	100	63.208	Amphilophus_citrinellus
ENSCHIG00000016135	GFI1	100	54.651	ENSAOCG00000008339	gfi1ab	100	53.596	Amphiprion_ocellaris
ENSCHIG00000016135	GFI1	100	62.785	ENSAPEG00000023870	gfi1ab	100	61.731	Amphiprion_percula
ENSCHIG00000016135	GFI1	100	60.190	ENSATEG00000009167	gfi1ab	89	59.302	Anabas_testudineus
ENSCHIG00000016135	GFI1	87	75.202	ENSAPLG00000015700	GFI1	99	75.202	Anas_platyrhynchos
ENSCHIG00000016135	GFI1	100	71.296	ENSACAG00000004498	GFI1	100	71.528	Anolis_carolinensis
ENSCHIG00000016135	GFI1	100	90.284	ENSANAG00000019656	GFI1	100	90.284	Aotus_nancymaae
ENSCHIG00000016135	GFI1	100	63.466	ENSACLG00000026458	gfi1ab	93	62.998	Astatotilapia_calliptera
ENSCHIG00000016135	GFI1	100	60.941	ENSAMXG00000039600	gfi1ab	100	60.706	Astyanax_mexicanus
ENSCHIG00000016135	GFI1	59	87.568	ENSAMXG00000006669	GFI1	59	87.568	Astyanax_mexicanus
ENSCHIG00000016135	GFI1	100	99.286	ENSBTAG00000016723	GFI1	100	99.286	Bos_taurus
ENSCHIG00000016135	GFI1	100	89.573	ENSCJAG00000017609	GFI1	100	89.573	Callithrix_jacchus
ENSCHIG00000016135	GFI1	100	95.024	ENSCAFG00000020155	GFI1	100	95.024	Canis_familiaris
ENSCHIG00000016135	GFI1	100	95.024	ENSCAFG00020013371	GFI1	88	95.024	Canis_lupus_dingo
ENSCHIG00000016135	GFI1	100	89.549	ENSCPOG00000011727	GFI1	100	89.074	Cavia_porcellus
ENSCHIG00000016135	GFI1	100	90.521	ENSCCAG00000036072	GFI1	100	90.521	Cebus_capucinus
ENSCHIG00000016135	GFI1	100	91.706	ENSCATG00000037873	GFI1	100	91.706	Cercocebus_atys
ENSCHIG00000016135	GFI1	100	85.273	ENSCLAG00000005915	GFI1	100	83.372	Chinchilla_lanigera
ENSCHIG00000016135	GFI1	86	90.110	ENSCSAG00000001469	GFI1	100	90.110	Chlorocebus_sabaeus
ENSCHIG00000016135	GFI1	100	91.469	ENSCANG00000034077	GFI1	100	91.469	Colobus_angolensis_palliatus
ENSCHIG00000016135	GFI1	100	85.308	ENSCGRG00001015432	Gfi1	100	85.308	Cricetulus_griseus_chok1gshd
ENSCHIG00000016135	GFI1	100	58.782	ENSCSEG00000017729	GFI1	100	58.782	Cynoglossus_semilaevis
ENSCHIG00000016135	GFI1	100	59.906	ENSCVAG00000004930	GFI1	100	60.606	Cyprinodon_variegatus
ENSCHIG00000016135	GFI1	100	62.207	ENSCVAG00000011828	gfi1ab	100	61.033	Cyprinodon_variegatus
ENSCHIG00000016135	GFI1	100	65.023	ENSDARG00000044457	gfi1ab	100	63.218	Danio_rerio
ENSCHIG00000016135	GFI1	100	90.544	ENSDNOG00000000782	GFI1	97	91.726	Dasypus_novemcinctus
ENSCHIG00000016135	GFI1	100	92.671	ENSEASG00005015509	GFI1	86	92.435	Equus_asinus_asinus
ENSCHIG00000016135	GFI1	86	91.758	ENSECAG00000006647	GFI1	92	85.861	Equus_caballus
ENSCHIG00000016135	GFI1	100	85.952	ENSEEUG00000000198	GFI1	100	85.952	Erinaceus_europaeus
ENSCHIG00000016135	GFI1	100	63.510	ENSELUG00000003015	gfi1ab	99	63.048	Esox_lucius
ENSCHIG00000016135	GFI1	100	59.112	ENSELUG00000019033	GFI1	100	58.879	Esox_lucius
ENSCHIG00000016135	GFI1	100	95.024	ENSFCAG00000005914	GFI1	100	95.024	Felis_catus
ENSCHIG00000016135	GFI1	100	62.150	ENSFHEG00000010997	gfi1ab	100	60.981	Fundulus_heteroclitus
ENSCHIG00000016135	GFI1	100	58.986	ENSFHEG00000000341	GFI1	100	60.138	Fundulus_heteroclitus
ENSCHIG00000016135	GFI1	100	61.702	ENSGMOG00000007737	gfi1ab	100	61.939	Gadus_morhua
ENSCHIG00000016135	GFI1	100	73.721	ENSGALG00000043650	GFI1	100	73.721	Gallus_gallus
ENSCHIG00000016135	GFI1	100	58.661	ENSGAFG00000018063	GFI1	100	56.570	Gambusia_affinis
ENSCHIG00000016135	GFI1	100	62.150	ENSGAFG00000016637	gfi1ab	100	59.861	Gambusia_affinis
ENSCHIG00000016135	GFI1	100	62.648	ENSGACG00000004257	gfi1ab	97	62.233	Gasterosteus_aculeatus
ENSCHIG00000016135	GFI1	100	91.943	ENSGGOG00000005320	GFI1	100	91.943	Gorilla_gorilla
ENSCHIG00000016135	GFI1	100	63.420	ENSHBUG00000011969	gfi1ab	100	62.648	Haplochromis_burtoni
ENSCHIG00000016135	GFI1	100	90.261	ENSHGLG00000008020	GFI1	100	89.549	Heterocephalus_glaber_female
ENSCHIG00000016135	GFI1	100	90.261	ENSHGLG00100000610	GFI1	100	89.549	Heterocephalus_glaber_male
ENSCHIG00000016135	GFI1	100	57.346	ENSHCOG00000019555	GFI1	84	89.247	Hippocampus_comes
ENSCHIG00000016135	GFI1	100	53.363	ENSHCOG00000008590	gfi1ab	100	50.776	Hippocampus_comes
ENSCHIG00000016135	GFI1	100	58.216	ENSIPUG00000013414	GFI1	100	57.576	Ictalurus_punctatus
ENSCHIG00000016135	GFI1	100	61.702	ENSIPUG00000010071	gfi1ab	87	61.305	Ictalurus_punctatus
ENSCHIG00000016135	GFI1	100	90.047	ENSSTOG00000014583	GFI1	100	90.047	Ictidomys_tridecemlineatus
ENSCHIG00000016135	GFI1	100	62.824	ENSKMAG00000003810	gfi1ab	100	62.118	Kryptolebias_marmoratus
ENSCHIG00000016135	GFI1	100	62.005	ENSLBEG00000027776	gfi1ab	100	61.772	Labrus_bergylta
ENSCHIG00000016135	GFI1	99	77.222	ENSLACG00000017590	-	99	77.222	Latimeria_chalumnae
ENSCHIG00000016135	GFI1	100	69.626	ENSLACG00000013362	GFI1	98	69.626	Latimeria_chalumnae
ENSCHIG00000016135	GFI1	100	67.832	ENSLOCG00000004711	gfi1ab	100	66.207	Lepisosteus_oculatus
ENSCHIG00000016135	GFI1	100	85.545	ENSLAFG00000018346	GFI1	100	85.545	Loxodonta_africana
ENSCHIG00000016135	GFI1	100	91.706	ENSMFAG00000045801	GFI1	100	91.706	Macaca_fascicularis
ENSCHIG00000016135	GFI1	100	91.706	ENSMNEG00000036338	GFI1	100	91.706	Macaca_nemestrina
ENSCHIG00000016135	GFI1	100	91.706	ENSMLEG00000036181	GFI1	100	91.706	Mandrillus_leucophaeus
ENSCHIG00000016135	GFI1	100	64.000	ENSMAMG00000008125	gfi1ab	100	62.353	Mastacembelus_armatus
ENSCHIG00000016135	GFI1	100	63.700	ENSMZEG00005009895	gfi1ab	100	63.232	Maylandia_zebra
ENSCHIG00000016135	GFI1	88	76.075	ENSMGAG00000008187	GFI1	100	76.075	Meleagris_gallopavo
ENSCHIG00000016135	GFI1	100	92.417	ENSMICG00000047208	GFI1	100	92.417	Microcebus_murinus
ENSCHIG00000016135	GFI1	100	59.102	ENSMMOG00000005556	gfi1ab	100	59.242	Mola_mola
ENSCHIG00000016135	GFI1	100	80.275	ENSMODG00000011802	GFI1	100	79.587	Monodelphis_domestica
ENSCHIG00000016135	GFI1	100	63.294	ENSMALG00000014672	gfi1ab	100	60.706	Monopterus_albus
ENSCHIG00000016135	GFI1	100	86.761	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSCHIG00000016135	GFI1	100	86.288	ENSMUSG00000029275	Gfi1	100	86.288	Mus_musculus
ENSCHIG00000016135	GFI1	100	86.288	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSCHIG00000016135	GFI1	100	86.052	MGP_SPRETEiJ_G0028507	Gfi1	100	86.052	Mus_spretus
ENSCHIG00000016135	GFI1	100	83.412	ENSMPUG00000004178	GFI1	97	83.412	Mustela_putorius_furo
ENSCHIG00000016135	GFI1	100	89.858	ENSMLUG00000015191	GFI1	97	88.208	Myotis_lucifugus
ENSCHIG00000016135	GFI1	100	62.181	ENSNBRG00000015774	gfi1ab	100	60.557	Neolamprologus_brichardi
ENSCHIG00000016135	GFI1	93	90.026	ENSNLEG00000010470	GFI1	97	90.026	Nomascus_leucogenys
ENSCHIG00000016135	GFI1	100	90.758	ENSOPRG00000001473	GFI1	100	90.758	Ochotona_princeps
ENSCHIG00000016135	GFI1	100	63.146	ENSONIG00000019246	gfi1ab	100	62.676	Oreochromis_niloticus
ENSCHIG00000016135	GFI1	86	87.705	ENSOCUG00000023553	GFI1	93	89.617	Oryctolagus_cuniculus
ENSCHIG00000016135	GFI1	100	60.706	ENSORLG00000013806	gfi1ab	100	60.235	Oryzias_latipes
ENSCHIG00000016135	GFI1	100	59.579	ENSORLG00000005060	GFI1	100	59.579	Oryzias_latipes
ENSCHIG00000016135	GFI1	100	54.695	ENSORLG00020002817	GFI1	90	62.691	Oryzias_latipes_hni
ENSCHIG00000016135	GFI1	100	60.280	ENSORLG00020001602	gfi1ab	100	60.471	Oryzias_latipes_hni
ENSCHIG00000016135	GFI1	100	60.047	ENSORLG00015006070	GFI1	100	59.813	Oryzias_latipes_hsok
ENSCHIG00000016135	GFI1	100	59.765	ENSOMEG00000016722	GFI1	100	58.974	Oryzias_melastigma
ENSCHIG00000016135	GFI1	100	77.197	ENSOGAG00000027913	GFI1	100	79.048	Otolemur_garnettii
ENSCHIG00000016135	GFI1	69	98.095	ENSOARG00000016329	GFI1	94	98.095	Ovis_aries
ENSCHIG00000016135	GFI1	100	77.700	ENSPPAG00000042186	GFI1	100	67.857	Pan_paniscus
ENSCHIG00000016135	GFI1	100	95.024	ENSPPRG00000007521	GFI1	100	95.024	Panthera_pardus
ENSCHIG00000016135	GFI1	100	91.943	ENSPTRG00000043053	GFI1	100	91.943	Pan_troglodytes
ENSCHIG00000016135	GFI1	100	91.706	ENSPANG00000016433	GFI1	100	91.706	Papio_anubis
ENSCHIG00000016135	GFI1	100	65.046	ENSPKIG00000004263	GFI1	100	63.699	Paramormyrops_kingsleyae
ENSCHIG00000016135	GFI1	88	75.806	ENSPSIG00000008734	GFI1	97	75.806	Pelodiscus_sinensis
ENSCHIG00000016135	GFI1	100	58.920	ENSPMGG00000012546	gfi1ab	100	59.620	Periophthalmus_magnuspinnatus
ENSCHIG00000016135	GFI1	100	82.051	ENSPCIG00000013728	GFI1	100	82.284	Phascolarctos_cinereus
ENSCHIG00000016135	GFI1	50	51.389	ENSPFOG00000024581	-	67	51.389	Poecilia_formosa
ENSCHIG00000016135	GFI1	100	62.704	ENSPFOG00000023214	gfi1ab	100	59.584	Poecilia_formosa
ENSCHIG00000016135	GFI1	100	62.704	ENSPLAG00000010879	gfi1ab	98	76.471	Poecilia_latipinna
ENSCHIG00000016135	GFI1	100	59.491	ENSPLAG00000005376	GFI1	91	59.193	Poecilia_latipinna
ENSCHIG00000016135	GFI1	100	62.676	ENSPMEG00000013694	gfi1ab	100	60.849	Poecilia_mexicana
ENSCHIG00000016135	GFI1	100	59.722	ENSPMEG00000019299	GFI1	100	62.383	Poecilia_mexicana
ENSCHIG00000016135	GFI1	100	62.704	ENSPREG00000014097	gfi1ab	100	59.674	Poecilia_reticulata
ENSCHIG00000016135	GFI1	100	55.046	ENSPREG00000007997	GFI1	100	55.046	Poecilia_reticulata
ENSCHIG00000016135	GFI1	100	79.059	ENSPCAG00000011020	GFI1	100	79.059	Procavia_capensis
ENSCHIG00000016135	GFI1	100	91.469	ENSPCOG00000020540	GFI1	100	91.469	Propithecus_coquereli
ENSCHIG00000016135	GFI1	100	88.152	ENSPVAG00000006928	GFI1	100	89.573	Pteropus_vampyrus
ENSCHIG00000016135	GFI1	100	63.466	ENSPNYG00000021183	gfi1ab	100	62.998	Pundamilia_nyererei
ENSCHIG00000016135	GFI1	100	56.368	ENSPNAG00000028014	GFI1	100	55.012	Pygocentrus_nattereri
ENSCHIG00000016135	GFI1	99	50.628	ENSPNAG00000014299	-	58	62.147	Pygocentrus_nattereri
ENSCHIG00000016135	GFI1	100	60.993	ENSPNAG00000027258	gfi1ab	100	60.284	Pygocentrus_nattereri
ENSCHIG00000016135	GFI1	100	85.816	ENSRNOG00000002042	Gfi1	100	85.816	Rattus_norvegicus
ENSCHIG00000016135	GFI1	100	91.706	ENSRBIG00000036467	GFI1	100	91.706	Rhinopithecus_bieti
ENSCHIG00000016135	GFI1	100	91.706	ENSRROG00000031687	GFI1	100	91.706	Rhinopithecus_roxellana
ENSCHIG00000016135	GFI1	100	90.047	ENSSBOG00000031300	GFI1	100	90.047	Saimiri_boliviensis_boliviensis
ENSCHIG00000016135	GFI1	100	67.136	ENSSFOG00015020295	gfi1	100	66.667	Scleropages_formosus
ENSCHIG00000016135	GFI1	100	62.850	ENSSMAG00000002782	gfi1ab	100	62.207	Scophthalmus_maximus
ENSCHIG00000016135	GFI1	100	62.411	ENSSDUG00000022410	gfi1ab	100	62.411	Seriola_dumerili
ENSCHIG00000016135	GFI1	100	62.500	ENSSLDG00000020163	gfi1ab	100	62.648	Seriola_lalandi_dorsalis
ENSCHIG00000016135	GFI1	82	76.471	ENSSPAG00000009140	gfi1ab	99	78.788	Stegastes_partitus
ENSCHIG00000016135	GFI1	100	95.952	ENSSSCG00000006902	GFI1	100	95.952	Sus_scrofa
ENSCHIG00000016135	GFI1	88	75.472	ENSTGUG00000006060	GFI1	100	75.472	Taeniopygia_guttata
ENSCHIG00000016135	GFI1	100	60.563	ENSTRUG00000000415	gfi1ab	100	60.094	Takifugu_rubripes
ENSCHIG00000016135	GFI1	100	61.085	ENSTNIG00000000651	gfi1ab	97	60.849	Tetraodon_nigroviridis
ENSCHIG00000016135	GFI1	100	95.476	ENSTTRG00000000082	GFI1	100	95.476	Tursiops_truncatus
ENSCHIG00000016135	GFI1	100	89.362	ENSUAMG00000021124	GFI1	91	89.598	Ursus_americanus
ENSCHIG00000016135	GFI1	100	67.773	ENSXETG00000023006	gfi1	98	66.981	Xenopus_tropicalis
ENSCHIG00000016135	GFI1	100	61.628	ENSXMAG00000010523	gfi1ab	100	59.535	Xiphophorus_maculatus
ENSCHIG00000016135	GFI1	50	52.358	ENSXMAG00000006527	-	65	52.358	Xiphophorus_maculatus
ENSCHIG00000016135	GFI1	100	54.450	ENSXMAG00000009274	GFI1	70	51.145	Xiphophorus_maculatus