EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000016418 (Gene tree)
Gene ID: 102189606
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 49871 bases
Position: chr15:19156700-19206570
Accession: 102189606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000016002	Suf	PF05843.14	1.6e-83	1	1
ENSCHIP00000015999	Suf	PF05843.14	5.8e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000023805	CSTF3-201	2079	XM_005690063	ENSCHIP00000015999	692 (aa)	XP_005690120	UPI000D195606
ENSCHIT00000023809	CSTF3-202	1929	-	ENSCHIP00000016002	625 (aa)	-	UPI000056F1A5

Gene Model

Click here to download ENSCHIG00000016418's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016418's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016418	CSTF3	100	100.000	ENSG00000176102	CSTF3	99	100.000	Homo_sapiens
ENSCHIG00000016418	CSTF3	100	91.360	ENSAPOG00000014054	cstf3	98	90.469	Acanthochromis_polyacanthus
ENSCHIG00000016418	CSTF3	100	99.840	ENSAMEG00000007187	CSTF3	98	98.293	Ailuropoda_melanoleuca
ENSCHIG00000016418	CSTF3	100	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSCHIG00000016418	CSTF3	100	91.040	ENSAOCG00000010930	cstf3	98	90.185	Amphiprion_ocellaris
ENSCHIG00000016418	CSTF3	100	91.040	ENSAPEG00000007903	cstf3	98	90.185	Amphiprion_percula
ENSCHIG00000016418	CSTF3	100	91.360	ENSATEG00000000190	cstf3	98	90.469	Anabas_testudineus
ENSCHIG00000016418	CSTF3	100	97.760	ENSAPLG00000007217	CSTF3	99	96.444	Anas_platyrhynchos
ENSCHIG00000016418	CSTF3	100	95.840	ENSACAG00000002823	CSTF3	98	94.737	Anolis_carolinensis
ENSCHIG00000016418	CSTF3	100	100.000	ENSANAG00000020699	CSTF3	100	100.000	Aotus_nancymaae
ENSCHIG00000016418	CSTF3	100	91.236	ENSACLG00000007820	cstf3	98	91.236	Astatotilapia_calliptera
ENSCHIG00000016418	CSTF3	100	92.320	ENSAMXG00000014198	cstf3	98	91.477	Astyanax_mexicanus
ENSCHIG00000016418	CSTF3	100	100.000	ENSBTAG00000008617	CSTF3	100	98.368	Bos_taurus
ENSCHIG00000016418	CSTF3	99	48.626	WBGene00006307	suf-1	99	48.626	Caenorhabditis_elegans
ENSCHIG00000016418	CSTF3	100	100.000	ENSCJAG00000005533	CSTF3	100	100.000	Callithrix_jacchus
ENSCHIG00000016418	CSTF3	100	100.000	ENSCAFG00000007264	CSTF3	98	98.435	Canis_familiaris
ENSCHIG00000016418	CSTF3	100	100.000	ENSCAFG00020002715	CSTF3	98	100.000	Canis_lupus_dingo
ENSCHIG00000016418	CSTF3	100	99.520	ENSTSYG00000000451	CSTF3	100	99.520	Carlito_syrichta
ENSCHIG00000016418	CSTF3	90	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSCHIG00000016418	CSTF3	100	99.680	ENSCPOG00000005545	CSTF3	99	98.151	Cavia_porcellus
ENSCHIG00000016418	CSTF3	100	100.000	ENSCCAG00000024790	CSTF3	100	100.000	Cebus_capucinus
ENSCHIG00000016418	CSTF3	100	100.000	ENSCATG00000007080	CSTF3	100	100.000	Cercocebus_atys
ENSCHIG00000016418	CSTF3	100	100.000	ENSCLAG00000016179	CSTF3	98	98.435	Chinchilla_lanigera
ENSCHIG00000016418	CSTF3	78	99.659	ENSCHOG00000002497	CSTF3	78	99.659	Choloepus_hoffmanni
ENSCHIG00000016418	CSTF3	100	97.600	ENSCPBG00000006753	CSTF3	98	96.302	Chrysemys_picta_bellii
ENSCHIG00000016418	CSTF3	100	62.243	ENSCING00000006401	-	98	61.181	Ciona_intestinalis
ENSCHIG00000016418	CSTF3	100	61.635	ENSCSAVG00000004851	-	99	60.784	Ciona_savignyi
ENSCHIG00000016418	CSTF3	100	100.000	ENSCANG00000035468	CSTF3	100	100.000	Colobus_angolensis_palliatus
ENSCHIG00000016418	CSTF3	100	99.520	ENSCGRG00001014773	Cstf3	98	98.009	Cricetulus_griseus_chok1gshd
ENSCHIG00000016418	CSTF3	100	99.520	ENSCGRG00000004142	Cstf3	98	98.009	Cricetulus_griseus_crigri
ENSCHIG00000016418	CSTF3	100	91.040	ENSCSEG00000014283	cstf3	98	90.185	Cynoglossus_semilaevis
ENSCHIG00000016418	CSTF3	100	90.240	ENSCVAG00000019739	cstf3	98	89.331	Cyprinodon_variegatus
ENSCHIG00000016418	CSTF3	100	90.720	ENSDARG00000018904	cstf3	98	90.185	Danio_rerio
ENSCHIG00000016418	CSTF3	100	99.520	ENSDNOG00000007366	CSTF3	98	98.009	Dasypus_novemcinctus
ENSCHIG00000016418	CSTF3	100	92.800	ENSDORG00000005898	Cstf3	98	91.903	Dipodomys_ordii
ENSCHIG00000016418	CSTF3	99	57.829	FBgn0003559	su(f)	97	56.648	Drosophila_melanogaster
ENSCHIG00000016418	CSTF3	96	99.331	ENSETEG00000017097	CSTF3	83	99.331	Echinops_telfairi
ENSCHIG00000016418	CSTF3	86	75.421	ENSEBUG00000015459	cstf3	96	75.421	Eptatretus_burgeri
ENSCHIG00000016418	CSTF3	100	99.840	ENSEASG00005019884	CSTF3	100	98.286	Equus_asinus_asinus
ENSCHIG00000016418	CSTF3	100	99.840	ENSECAG00000023338	CSTF3	100	98.286	Equus_caballus
ENSCHIG00000016418	CSTF3	100	93.440	ENSEEUG00000015167	CSTF3	98	92.603	Erinaceus_europaeus
ENSCHIG00000016418	CSTF3	100	89.440	ENSELUG00000023393	cstf3	98	88.905	Esox_lucius
ENSCHIG00000016418	CSTF3	100	99.840	ENSFCAG00000030711	CSTF3	98	98.293	Felis_catus
ENSCHIG00000016418	CSTF3	100	97.600	ENSFALG00000010764	CSTF3	100	95.238	Ficedula_albicollis
ENSCHIG00000016418	CSTF3	100	99.840	ENSFDAG00000012082	CSTF3	98	98.293	Fukomys_damarensis
ENSCHIG00000016418	CSTF3	100	90.400	ENSFHEG00000020623	cstf3	98	89.474	Fundulus_heteroclitus
ENSCHIG00000016418	CSTF3	100	89.457	ENSGMOG00000012275	cstf3	98	88.636	Gadus_morhua
ENSCHIG00000016418	CSTF3	100	98.240	ENSGALG00000011685	CSTF3	98	96.871	Gallus_gallus
ENSCHIG00000016418	CSTF3	100	90.720	ENSGAFG00000002181	cstf3	98	89.758	Gambusia_affinis
ENSCHIG00000016418	CSTF3	100	90.560	ENSGACG00000015997	cstf3	98	89.758	Gasterosteus_aculeatus
ENSCHIG00000016418	CSTF3	100	97.600	ENSGAGG00000006200	CSTF3	98	96.302	Gopherus_agassizii
ENSCHIG00000016418	CSTF3	100	95.520	ENSGGOG00000026591	CSTF3	98	95.520	Gorilla_gorilla
ENSCHIG00000016418	CSTF3	100	91.236	ENSHBUG00000016656	cstf3	98	91.236	Haplochromis_burtoni
ENSCHIG00000016418	CSTF3	100	99.680	ENSHGLG00000017834	CSTF3	98	98.151	Heterocephalus_glaber_female
ENSCHIG00000016418	CSTF3	100	99.680	ENSHGLG00100018042	CSTF3	99	98.151	Heterocephalus_glaber_male
ENSCHIG00000016418	CSTF3	100	90.080	ENSHCOG00000015218	cstf3	98	89.843	Hippocampus_comes
ENSCHIG00000016418	CSTF3	100	90.560	ENSIPUG00000013170	CSTF3	99	89.616	Ictalurus_punctatus
ENSCHIG00000016418	CSTF3	100	100.000	ENSSTOG00000013306	CSTF3	98	98.435	Ictidomys_tridecemlineatus
ENSCHIG00000016418	CSTF3	100	86.560	ENSJJAG00000018430	Cstf3	98	86.486	Jaculus_jaculus
ENSCHIG00000016418	CSTF3	100	90.240	ENSKMAG00000010916	cstf3	98	89.189	Kryptolebias_marmoratus
ENSCHIG00000016418	CSTF3	100	90.080	ENSLBEG00000002306	cstf3	98	89.331	Labrus_bergylta
ENSCHIG00000016418	CSTF3	100	93.920	ENSLACG00000017296	CSTF3	98	92.745	Latimeria_chalumnae
ENSCHIG00000016418	CSTF3	100	93.120	ENSLOCG00000004415	cstf3	98	92.176	Lepisosteus_oculatus
ENSCHIG00000016418	CSTF3	100	99.680	ENSLAFG00000008712	CSTF3	98	98.151	Loxodonta_africana
ENSCHIG00000016418	CSTF3	100	100.000	ENSMFAG00000029516	CSTF3	100	100.000	Macaca_fascicularis
ENSCHIG00000016418	CSTF3	100	100.000	ENSMMUG00000002542	CSTF3	98	98.435	Macaca_mulatta
ENSCHIG00000016418	CSTF3	100	100.000	ENSMNEG00000021807	CSTF3	100	100.000	Macaca_nemestrina
ENSCHIG00000016418	CSTF3	100	100.000	ENSMLEG00000039594	CSTF3	100	100.000	Mandrillus_leucophaeus
ENSCHIG00000016418	CSTF3	100	91.618	ENSMAMG00000020423	cstf3	98	91.618	Mastacembelus_armatus
ENSCHIG00000016418	CSTF3	100	91.236	ENSMZEG00005012082	cstf3	99	91.236	Maylandia_zebra
ENSCHIG00000016418	CSTF3	100	98.240	ENSMGAG00000001383	CSTF3	99	96.459	Meleagris_gallopavo
ENSCHIG00000016418	CSTF3	100	99.360	ENSMAUG00000002487	Cstf3	98	97.866	Mesocricetus_auratus
ENSCHIG00000016418	CSTF3	100	99.680	ENSMICG00000004784	CSTF3	100	99.680	Microcebus_murinus
ENSCHIG00000016418	CSTF3	100	99.520	ENSMOCG00000017583	Cstf3	98	98.009	Microtus_ochrogaster
ENSCHIG00000016418	CSTF3	100	90.720	ENSMMOG00000016026	cstf3	94	89.900	Mola_mola
ENSCHIG00000016418	CSTF3	100	84.640	ENSMODG00000025205	-	98	83.642	Monodelphis_domestica
ENSCHIG00000016418	CSTF3	100	98.720	ENSMODG00000009745	-	98	97.297	Monodelphis_domestica
ENSCHIG00000016418	CSTF3	100	90.720	ENSMALG00000012050	cstf3	98	90.157	Monopterus_albus
ENSCHIG00000016418	CSTF3	100	99.520	MGP_CAROLIEiJ_G0024026	Cstf3	98	98.009	Mus_caroli
ENSCHIG00000016418	CSTF3	100	99.520	ENSMUSG00000027176	Cstf3	98	98.009	Mus_musculus
ENSCHIG00000016418	CSTF3	100	99.520	MGP_PahariEiJ_G0025464	Cstf3	98	98.009	Mus_pahari
ENSCHIG00000016418	CSTF3	100	99.520	MGP_SPRETEiJ_G0024939	Cstf3	98	98.009	Mus_spretus
ENSCHIG00000016418	CSTF3	100	99.840	ENSMPUG00000011457	CSTF3	98	98.293	Mustela_putorius_furo
ENSCHIG00000016418	CSTF3	100	99.680	ENSMLUG00000003073	-	98	98.151	Myotis_lucifugus
ENSCHIG00000016418	CSTF3	100	96.480	ENSMLUG00000026022	-	98	95.021	Myotis_lucifugus
ENSCHIG00000016418	CSTF3	100	99.520	ENSNGAG00000010677	Cstf3	98	98.009	Nannospalax_galili
ENSCHIG00000016418	CSTF3	100	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSCHIG00000016418	CSTF3	100	100.000	ENSNLEG00000017901	CSTF3	100	100.000	Nomascus_leucogenys
ENSCHIG00000016418	CSTF3	81	94.862	ENSMEUG00000005640	-	98	94.737	Notamacropus_eugenii
ENSCHIG00000016418	CSTF3	67	100.000	ENSOPRG00000000199	-	65	100.000	Ochotona_princeps
ENSCHIG00000016418	CSTF3	100	99.855	ENSODEG00000016737	-	99	99.855	Octodon_degus
ENSCHIG00000016418	CSTF3	99	88.871	ENSODEG00000006311	-	95	88.871	Octodon_degus
ENSCHIG00000016418	CSTF3	100	91.040	ENSONIG00000005563	cstf3	98	90.327	Oreochromis_niloticus
ENSCHIG00000016418	CSTF3	100	97.767	ENSOANG00000015140	CSTF3	98	97.634	Ornithorhynchus_anatinus
ENSCHIG00000016418	CSTF3	100	99.680	ENSOCUG00000015417	CSTF3	98	98.151	Oryctolagus_cuniculus
ENSCHIG00000016418	CSTF3	100	90.720	ENSORLG00000009762	cstf3	98	89.900	Oryzias_latipes
ENSCHIG00000016418	CSTF3	100	90.720	ENSORLG00020005540	cstf3	98	90.157	Oryzias_latipes_hni
ENSCHIG00000016418	CSTF3	100	91.185	ENSORLG00015003551	cstf3	98	91.185	Oryzias_latipes_hsok
ENSCHIG00000016418	CSTF3	100	90.080	ENSOMEG00000003848	cstf3	98	89.331	Oryzias_melastigma
ENSCHIG00000016418	CSTF3	100	99.363	ENSOGAG00000010229	CSTF3	98	97.875	Otolemur_garnettii
ENSCHIG00000016418	CSTF3	100	100.000	ENSOARG00000017271	CSTF3	97	99.842	Ovis_aries
ENSCHIG00000016418	CSTF3	100	97.832	ENSPPAG00000027358	CSTF3	98	97.832	Pan_paniscus
ENSCHIG00000016418	CSTF3	100	99.840	ENSPPRG00000016852	CSTF3	98	98.293	Panthera_pardus
ENSCHIG00000016418	CSTF3	100	99.840	ENSPTIG00000008716	CSTF3	98	98.293	Panthera_tigris_altaica
ENSCHIG00000016418	CSTF3	100	100.000	ENSPTRG00000003485	CSTF3	98	98.435	Pan_troglodytes
ENSCHIG00000016418	CSTF3	100	100.000	ENSPANG00000013722	CSTF3	99	98.435	Papio_anubis
ENSCHIG00000016418	CSTF3	100	92.160	ENSPKIG00000023648	cstf3	98	91.465	Paramormyrops_kingsleyae
ENSCHIG00000016418	CSTF3	100	97.120	ENSPSIG00000009173	CSTF3	98	95.875	Pelodiscus_sinensis
ENSCHIG00000016418	CSTF3	75	93.809	ENSPMGG00000000164	cstf3	97	93.809	Periophthalmus_magnuspinnatus
ENSCHIG00000016418	CSTF3	100	99.360	ENSPEMG00000011481	Cstf3	98	97.866	Peromyscus_maniculatus_bairdii
ENSCHIG00000016418	CSTF3	100	81.081	ENSPMAG00000007282	cstf3	98	78.895	Petromyzon_marinus
ENSCHIG00000016418	CSTF3	100	98.240	ENSPCIG00000026406	-	100	98.240	Phascolarctos_cinereus
ENSCHIG00000016418	CSTF3	100	81.310	ENSPCIG00000030419	-	88	80.966	Phascolarctos_cinereus
ENSCHIG00000016418	CSTF3	100	90.880	ENSPFOG00000017239	cstf3	98	89.900	Poecilia_formosa
ENSCHIG00000016418	CSTF3	100	90.880	ENSPLAG00000009456	cstf3	98	89.900	Poecilia_latipinna
ENSCHIG00000016418	CSTF3	100	90.880	ENSPMEG00000010320	cstf3	98	89.900	Poecilia_mexicana
ENSCHIG00000016418	CSTF3	100	91.329	ENSPREG00000013549	cstf3	98	91.329	Poecilia_reticulata
ENSCHIG00000016418	CSTF3	100	100.000	ENSPPYG00000003375	CSTF3	98	98.435	Pongo_abelii
ENSCHIG00000016418	CSTF3	70	100.000	ENSPCAG00000008025	-	69	100.000	Procavia_capensis
ENSCHIG00000016418	CSTF3	100	95.954	ENSPCOG00000014417	CSTF3	98	95.954	Propithecus_coquereli
ENSCHIG00000016418	CSTF3	100	95.520	ENSPVAG00000002350	CSTF3	98	94.452	Pteropus_vampyrus
ENSCHIG00000016418	CSTF3	100	91.236	ENSPNYG00000018259	cstf3	99	91.236	Pundamilia_nyererei
ENSCHIG00000016418	CSTF3	100	91.840	ENSPNAG00000020182	cstf3	98	91.181	Pygocentrus_nattereri
ENSCHIG00000016418	CSTF3	100	99.200	ENSRNOG00000012089	Cstf3	100	99.200	Rattus_norvegicus
ENSCHIG00000016418	CSTF3	100	100.000	ENSRBIG00000044258	CSTF3	100	100.000	Rhinopithecus_bieti
ENSCHIG00000016418	CSTF3	100	100.000	ENSRROG00000043450	CSTF3	100	100.000	Rhinopithecus_roxellana
ENSCHIG00000016418	CSTF3	100	100.000	ENSSBOG00000024764	CSTF3	100	100.000	Saimiri_boliviensis_boliviensis
ENSCHIG00000016418	CSTF3	100	85.760	ENSSHAG00000003135	-	97	85.206	Sarcophilus_harrisii
ENSCHIG00000016418	CSTF3	100	98.560	ENSSHAG00000018128	-	98	97.155	Sarcophilus_harrisii
ENSCHIG00000016418	CSTF3	100	92.000	ENSSFOG00015022133	cstf3	98	91.323	Scleropages_formosus
ENSCHIG00000016418	CSTF3	100	90.400	ENSSMAG00000002197	cstf3	98	89.474	Scophthalmus_maximus
ENSCHIG00000016418	CSTF3	100	91.200	ENSSDUG00000020426	cstf3	98	90.327	Seriola_dumerili
ENSCHIG00000016418	CSTF3	100	91.200	ENSSLDG00000025649	cstf3	100	90.580	Seriola_lalandi_dorsalis
ENSCHIG00000016418	CSTF3	100	99.680	ENSSARG00000000391	CSTF3	98	98.009	Sorex_araneus
ENSCHIG00000016418	CSTF3	100	96.800	ENSSPUG00000010546	CSTF3	100	95.514	Sphenodon_punctatus
ENSCHIG00000016418	CSTF3	100	91.200	ENSSPAG00000004958	cstf3	98	90.327	Stegastes_partitus
ENSCHIG00000016418	CSTF3	100	99.840	ENSSSCG00000040954	CSTF3	98	98.293	Sus_scrofa
ENSCHIG00000016418	CSTF3	100	97.600	ENSTGUG00000005010	CSTF3	99	96.302	Taeniopygia_guttata
ENSCHIG00000016418	CSTF3	100	89.920	ENSTRUG00000004959	cstf3	98	89.189	Takifugu_rubripes
ENSCHIG00000016418	CSTF3	100	90.400	ENSTNIG00000013811	cstf3	98	89.616	Tetraodon_nigroviridis
ENSCHIG00000016418	CSTF3	100	96.320	ENSTBEG00000001544	CSTF3	89	96.203	Tupaia_belangeri
ENSCHIG00000016418	CSTF3	100	96.480	ENSTTRG00000016366	CSTF3	98	95.306	Tursiops_truncatus
ENSCHIG00000016418	CSTF3	100	99.680	ENSUMAG00000018971	CSTF3	100	99.680	Ursus_maritimus
ENSCHIG00000016418	CSTF3	100	99.840	ENSVPAG00000007800	CSTF3	98	98.293	Vicugna_pacos
ENSCHIG00000016418	CSTF3	100	100.000	ENSVVUG00000014938	CSTF3	100	100.000	Vulpes_vulpes
ENSCHIG00000016418	CSTF3	97	80.488	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSCHIG00000016418	CSTF3	66	42.558	ENSXETG00000017946	-	98	42.558	Xenopus_tropicalis
ENSCHIG00000016418	CSTF3	100	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSCHIG00000016418	CSTF3	100	90.880	ENSXMAG00000009545	cstf3	98	89.900	Xiphophorus_maculatus