EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000016535 (Gene tree)
Gene ID: 102168548
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 226173 bases
Position: chr11:27411923-27638095
Accession: 102168548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000016217	S1	PF00575.23	3.8e-09	1	1
ENSCHIP00000016206	S1	PF00575.23	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024024	SRBD1-202	2916	-	ENSCHIP00000016217	971 (aa)	-	UPI000D18CD1C
ENSCHIT00000024013	SRBD1-201	3943	XM_005686559	ENSCHIP00000016206	1009 (aa)	XP_005686616	UPI000846DD18

Gene Model

Click here to download ENSCHIG00000016535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016535	SRBD1	98	89.257	ENSG00000068784	SRBD1	100	88.554	Homo_sapiens
ENSCHIG00000016535	SRBD1	100	50.097	ENSAPOG00000005103	si:ch211-117n7.8	83	58.608	Acanthochromis_polyacanthus
ENSCHIG00000016535	SRBD1	98	91.466	ENSAMEG00000005993	SRBD1	100	90.663	Ailuropoda_melanoleuca
ENSCHIG00000016535	SRBD1	82	57.770	ENSACIG00000009875	si:ch211-117n7.8	85	57.882	Amphilophus_citrinellus
ENSCHIG00000016535	SRBD1	98	51.957	ENSAOCG00000024718	si:ch211-117n7.8	99	51.957	Amphiprion_ocellaris
ENSCHIG00000016535	SRBD1	82	58.844	ENSAPEG00000002645	si:ch211-117n7.8	87	58.844	Amphiprion_percula
ENSCHIG00000016535	SRBD1	82	58.068	ENSATEG00000010844	si:ch211-117n7.8	84	58.068	Anabas_testudineus
ENSCHIG00000016535	SRBD1	98	71.215	ENSAPLG00000006313	SRBD1	100	70.887	Anas_platyrhynchos
ENSCHIG00000016535	SRBD1	98	88.353	ENSANAG00000025573	SRBD1	100	87.651	Aotus_nancymaae
ENSCHIG00000016535	SRBD1	98	50.674	ENSACLG00000024219	si:ch211-117n7.8	83	57.093	Astatotilapia_calliptera
ENSCHIG00000016535	SRBD1	89	58.278	ENSAMXG00000004294	SRBD1	93	55.785	Astyanax_mexicanus
ENSCHIG00000016535	SRBD1	100	96.881	ENSBTAG00000007508	SRBD1	100	96.881	Bos_taurus
ENSCHIG00000016535	SRBD1	73	30.133	WBGene00022830	ZK973.1	91	30.526	Caenorhabditis_elegans
ENSCHIG00000016535	SRBD1	98	87.651	ENSCJAG00000000727	SRBD1	100	86.847	Callithrix_jacchus
ENSCHIG00000016535	SRBD1	98	91.073	ENSCAFG00000002554	SRBD1	100	90.271	Canis_familiaris
ENSCHIG00000016535	SRBD1	98	87.964	ENSCAFG00020026284	SRBD1	99	90.603	Canis_lupus_dingo
ENSCHIG00000016535	SRBD1	98	90.271	ENSTSYG00000012797	SRBD1	100	89.669	Carlito_syrichta
ENSCHIG00000016535	SRBD1	98	87.337	ENSCPOG00000004773	SRBD1	100	86.633	Cavia_porcellus
ENSCHIG00000016535	SRBD1	98	88.855	ENSCCAG00000025589	SRBD1	100	88.153	Cebus_capucinus
ENSCHIG00000016535	SRBD1	98	89.859	ENSCATG00000039530	SRBD1	100	89.157	Cercocebus_atys
ENSCHIG00000016535	SRBD1	98	88.465	ENSCLAG00000008623	SRBD1	100	88.164	Chinchilla_lanigera
ENSCHIG00000016535	SRBD1	98	89.960	ENSCSAG00000013350	SRBD1	100	89.257	Chlorocebus_sabaeus
ENSCHIG00000016535	SRBD1	86	93.960	ENSCHOG00000003805	SRBD1	84	93.960	Choloepus_hoffmanni
ENSCHIG00000016535	SRBD1	98	74.447	ENSCPBG00000005677	SRBD1	100	73.817	Chrysemys_picta_bellii
ENSCHIG00000016535	SRBD1	78	42.239	ENSCING00000005950	-	99	42.239	Ciona_intestinalis
ENSCHIG00000016535	SRBD1	78	42.588	ENSCSAVG00000000861	-	99	42.588	Ciona_savignyi
ENSCHIG00000016535	SRBD1	98	89.336	ENSCANG00000016307	SRBD1	99	88.632	Colobus_angolensis_palliatus
ENSCHIG00000016535	SRBD1	98	84.569	ENSCGRG00001000513	Srbd1	100	84.469	Cricetulus_griseus_chok1gshd
ENSCHIG00000016535	SRBD1	98	84.569	ENSCGRG00000002283	Srbd1	100	84.469	Cricetulus_griseus_crigri
ENSCHIG00000016535	SRBD1	83	57.077	ENSCSEG00000000856	si:ch211-117n7.8	85	57.193	Cynoglossus_semilaevis
ENSCHIG00000016535	SRBD1	82	57.833	ENSCVAG00000020212	si:ch211-117n7.8	98	52.609	Cyprinodon_variegatus
ENSCHIG00000016535	SRBD1	98	89.990	ENSDNOG00000018686	SRBD1	100	89.289	Dasypus_novemcinctus
ENSCHIG00000016535	SRBD1	98	86.734	ENSDORG00000010468	Srbd1	100	86.734	Dipodomys_ordii
ENSCHIG00000016535	SRBD1	94	33.032	FBgn0051156	CG31156	98	33.701	Drosophila_melanogaster
ENSCHIG00000016535	SRBD1	88	82.531	ENSETEG00000000739	SRBD1	91	82.531	Echinops_telfairi
ENSCHIG00000016535	SRBD1	72	48.641	ENSEBUG00000008902	si:ch211-117n7.8	96	48.641	Eptatretus_burgeri
ENSCHIG00000016535	SRBD1	98	88.755	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSCHIG00000016535	SRBD1	100	91.807	ENSECAG00000013865	SRBD1	100	91.115	Equus_caballus
ENSCHIG00000016535	SRBD1	95	54.703	ENSELUG00000012592	si:ch211-117n7.8	91	54.703	Esox_lucius
ENSCHIG00000016535	SRBD1	100	91.189	ENSFCAG00000005101	SRBD1	100	92.169	Felis_catus
ENSCHIG00000016535	SRBD1	100	67.002	ENSFALG00000012966	SRBD1	100	68.442	Ficedula_albicollis
ENSCHIG00000016535	SRBD1	96	86.845	ENSFDAG00000016670	SRBD1	98	87.110	Fukomys_damarensis
ENSCHIG00000016535	SRBD1	82	57.951	ENSFHEG00000019480	si:ch211-117n7.8	82	57.951	Fundulus_heteroclitus
ENSCHIG00000016535	SRBD1	52	52.477	ENSGMOG00000018010	-	100	52.477	Gadus_morhua
ENSCHIG00000016535	SRBD1	98	70.370	ENSGALG00000009990	SRBD1	100	70.140	Gallus_gallus
ENSCHIG00000016535	SRBD1	97	50.896	ENSGAFG00000019664	si:ch211-117n7.8	93	52.784	Gambusia_affinis
ENSCHIG00000016535	SRBD1	62	61.760	ENSGACG00000010794	si:ch211-117n7.8	100	61.920	Gasterosteus_aculeatus
ENSCHIG00000016535	SRBD1	83	81.415	ENSGAGG00000006166	SRBD1	99	81.415	Gopherus_agassizii
ENSCHIG00000016535	SRBD1	96	89.897	ENSGGOG00000005910	SRBD1	99	89.927	Gorilla_gorilla
ENSCHIG00000016535	SRBD1	86	49.423	ENSHBUG00000013207	si:ch211-117n7.8	88	49.769	Haplochromis_burtoni
ENSCHIG00000016535	SRBD1	98	87.412	ENSHGLG00000018153	-	99	86.707	Heterocephalus_glaber_female
ENSCHIG00000016535	SRBD1	98	87.210	ENSHGLG00100015183	-	99	86.506	Heterocephalus_glaber_male
ENSCHIG00000016535	SRBD1	84	60.210	ENSIPUG00000009661	srbd1	85	60.210	Ictalurus_punctatus
ENSCHIG00000016535	SRBD1	98	89.659	ENSSTOG00000005898	SRBD1	100	88.956	Ictidomys_tridecemlineatus
ENSCHIG00000016535	SRBD1	98	80.060	ENSJJAG00000022244	Srbd1	100	79.760	Jaculus_jaculus
ENSCHIG00000016535	SRBD1	98	51.597	ENSKMAG00000003473	si:ch211-117n7.8	99	51.359	Kryptolebias_marmoratus
ENSCHIG00000016535	SRBD1	98	50.945	ENSLBEG00000027518	si:ch211-117n7.8	97	52.156	Labrus_bergylta
ENSCHIG00000016535	SRBD1	84	71.040	ENSLACG00000009790	SRBD1	99	71.040	Latimeria_chalumnae
ENSCHIG00000016535	SRBD1	94	59.457	ENSLOCG00000016360	si:ch211-117n7.8	97	58.974	Lepisosteus_oculatus
ENSCHIG00000016535	SRBD1	98	89.960	ENSMFAG00000042026	SRBD1	100	89.257	Macaca_fascicularis
ENSCHIG00000016535	SRBD1	98	89.960	ENSMMUG00000003490	SRBD1	100	89.257	Macaca_mulatta
ENSCHIG00000016535	SRBD1	98	87.249	ENSMNEG00000034701	SRBD1	100	86.546	Macaca_nemestrina
ENSCHIG00000016535	SRBD1	98	89.759	ENSMLEG00000000745	SRBD1	100	89.056	Mandrillus_leucophaeus
ENSCHIG00000016535	SRBD1	81	57.023	ENSMAMG00000021921	si:ch211-117n7.8	84	56.840	Mastacembelus_armatus
ENSCHIG00000016535	SRBD1	98	50.674	ENSMZEG00005027369	si:ch211-117n7.8	83	57.093	Maylandia_zebra
ENSCHIG00000016535	SRBD1	78	76.035	ENSMGAG00000010273	SRBD1	99	76.035	Meleagris_gallopavo
ENSCHIG00000016535	SRBD1	78	86.118	ENSMAUG00000013916	Srbd1	95	86.118	Mesocricetus_auratus
ENSCHIG00000016535	SRBD1	98	90.964	ENSMICG00000007835	SRBD1	100	90.261	Microcebus_murinus
ENSCHIG00000016535	SRBD1	98	83.032	ENSMOCG00000018716	Srbd1	100	82.932	Microtus_ochrogaster
ENSCHIG00000016535	SRBD1	82	56.537	ENSMMOG00000007507	si:ch211-117n7.8	87	56.537	Mola_mola
ENSCHIG00000016535	SRBD1	98	51.556	ENSMALG00000001562	si:ch211-117n7.8	93	52.977	Monopterus_albus
ENSCHIG00000016535	SRBD1	98	80.422	MGP_CAROLIEiJ_G0021934	Srbd1	99	83.706	Mus_caroli
ENSCHIG00000016535	SRBD1	98	81.124	ENSMUSG00000024135	Srbd1	99	82.653	Mus_musculus
ENSCHIG00000016535	SRBD1	98	79.719	MGP_PahariEiJ_G0020924	Srbd1	100	79.116	Mus_pahari
ENSCHIG00000016535	SRBD1	98	81.325	MGP_SPRETEiJ_G0022850	Srbd1	100	80.622	Mus_spretus
ENSCHIG00000016535	SRBD1	98	87.952	ENSMLUG00000007039	SRBD1	100	87.249	Myotis_lucifugus
ENSCHIG00000016535	SRBD1	98	82.583	ENSNGAG00000011893	Srbd1	100	82.583	Nannospalax_galili
ENSCHIG00000016535	SRBD1	82	55.833	ENSNBRG00000012873	si:ch211-117n7.8	85	56.190	Neolamprologus_brichardi
ENSCHIG00000016535	SRBD1	98	89.357	ENSNLEG00000016877	SRBD1	100	88.655	Nomascus_leucogenys
ENSCHIG00000016535	SRBD1	98	85.412	ENSODEG00000012095	SRBD1	100	84.708	Octodon_degus
ENSCHIG00000016535	SRBD1	98	50.530	ENSONIG00000000945	si:ch211-117n7.8	99	58.463	Oreochromis_niloticus
ENSCHIG00000016535	SRBD1	98	90.261	ENSOCUG00000015385	SRBD1	100	89.659	Oryctolagus_cuniculus
ENSCHIG00000016535	SRBD1	97	49.213	ENSORLG00000004427	si:ch211-117n7.8	96	49.401	Oryzias_latipes
ENSCHIG00000016535	SRBD1	98	50.676	ENSORLG00020012792	si:ch211-117n7.8	82	57.647	Oryzias_latipes_hni
ENSCHIG00000016535	SRBD1	98	50.918	ENSORLG00015018598	si:ch211-117n7.8	82	57.244	Oryzias_latipes_hsok
ENSCHIG00000016535	SRBD1	82	56.161	ENSOMEG00000012229	si:ch211-117n7.8	82	56.754	Oryzias_melastigma
ENSCHIG00000016535	SRBD1	98	84.995	ENSOGAG00000001076	SRBD1	100	84.995	Otolemur_garnettii
ENSCHIG00000016535	SRBD1	98	94.060	ENSOARG00000005958	SRBD1	100	94.060	Ovis_aries
ENSCHIG00000016535	SRBD1	98	89.458	ENSPPAG00000038442	SRBD1	100	88.755	Pan_paniscus
ENSCHIG00000016535	SRBD1	98	92.570	ENSPPRG00000003449	SRBD1	100	91.867	Panthera_pardus
ENSCHIG00000016535	SRBD1	98	92.570	ENSPTIG00000012495	SRBD1	100	91.867	Panthera_tigris_altaica
ENSCHIG00000016535	SRBD1	98	89.458	ENSPTRG00000011889	SRBD1	100	88.755	Pan_troglodytes
ENSCHIG00000016535	SRBD1	98	89.558	ENSPANG00000008063	SRBD1	100	88.855	Papio_anubis
ENSCHIG00000016535	SRBD1	96	52.503	ENSPKIG00000021973	si:ch211-117n7.8	97	53.862	Paramormyrops_kingsleyae
ENSCHIG00000016535	SRBD1	98	73.817	ENSPSIG00000008992	SRBD1	100	73.817	Pelodiscus_sinensis
ENSCHIG00000016535	SRBD1	88	53.940	ENSPMGG00000013348	si:ch211-117n7.8	98	52.214	Periophthalmus_magnuspinnatus
ENSCHIG00000016535	SRBD1	98	81.943	ENSPEMG00000020684	Srbd1	100	81.845	Peromyscus_maniculatus_bairdii
ENSCHIG00000016535	SRBD1	97	51.179	ENSPFOG00000010650	si:ch211-117n7.8	83	57.362	Poecilia_formosa
ENSCHIG00000016535	SRBD1	82	57.362	ENSPLAG00000002141	si:ch211-117n7.8	83	57.362	Poecilia_latipinna
ENSCHIG00000016535	SRBD1	97	51.375	ENSPMEG00000018537	si:ch211-117n7.8	93	52.887	Poecilia_mexicana
ENSCHIG00000016535	SRBD1	82	57.479	ENSPREG00000003258	si:ch211-117n7.8	85	57.479	Poecilia_reticulata
ENSCHIG00000016535	SRBD1	99	81.742	ENSPPYG00000012444	SRBD1	100	81.086	Pongo_abelii
ENSCHIG00000016535	SRBD1	81	81.589	ENSPCAG00000005629	SRBD1	85	81.589	Procavia_capensis
ENSCHIG00000016535	SRBD1	98	78.100	ENSPCOG00000017669	SRBD1	100	77.400	Propithecus_coquereli
ENSCHIG00000016535	SRBD1	98	81.124	ENSPVAG00000001782	SRBD1	100	80.422	Pteropus_vampyrus
ENSCHIG00000016535	SRBD1	86	53.494	ENSPNYG00000000508	si:ch211-117n7.8	89	53.837	Pundamilia_nyererei
ENSCHIG00000016535	SRBD1	87	59.152	ENSPNAG00000013492	SRBD1	90	59.375	Pygocentrus_nattereri
ENSCHIG00000016535	SRBD1	98	79.196	ENSRNOG00000014720	Srbd1	99	79.899	Rattus_norvegicus
ENSCHIG00000016535	SRBD1	98	89.537	ENSRBIG00000033486	SRBD1	99	88.934	Rhinopithecus_bieti
ENSCHIG00000016535	SRBD1	98	89.537	ENSRROG00000041599	SRBD1	99	88.934	Rhinopithecus_roxellana
ENSCHIG00000016535	SRBD1	98	88.253	ENSSBOG00000024982	SRBD1	100	87.550	Saimiri_boliviensis_boliviensis
ENSCHIG00000016535	SRBD1	82	59.716	ENSSFOG00015001128	si:ch211-117n7.8	90	59.716	Scleropages_formosus
ENSCHIG00000016535	SRBD1	82	57.362	ENSSMAG00000018256	si:ch211-117n7.8	82	57.715	Scophthalmus_maximus
ENSCHIG00000016535	SRBD1	82	57.126	ENSSLDG00000023189	si:ch211-117n7.8	83	57.126	Seriola_lalandi_dorsalis
ENSCHIG00000016535	SRBD1	98	78.894	ENSSARG00000009740	SRBD1	100	78.894	Sorex_araneus
ENSCHIG00000016535	SRBD1	88	75.112	ENSSPUG00000010475	SRBD1	100	71.741	Sphenodon_punctatus
ENSCHIG00000016535	SRBD1	82	55.595	ENSSPAG00000008092	-	84	56.066	Stegastes_partitus
ENSCHIG00000016535	SRBD1	100	92.885	ENSSSCG00000008445	SRBD1	100	92.885	Sus_scrofa
ENSCHIG00000016535	SRBD1	82	77.349	ENSTGUG00000003878	SRBD1	100	77.349	Taeniopygia_guttata
ENSCHIG00000016535	SRBD1	98	51.205	ENSTRUG00000007080	si:ch211-117n7.8	92	57.765	Takifugu_rubripes
ENSCHIG00000016535	SRBD1	98	50.735	ENSTNIG00000007464	si:ch211-117n7.8	99	50.245	Tetraodon_nigroviridis
ENSCHIG00000016535	SRBD1	81	97.872	ENSTBEG00000004556	SRBD1	82	97.872	Tupaia_belangeri
ENSCHIG00000016535	SRBD1	94	95.853	ENSTTRG00000011871	SRBD1	94	95.853	Tursiops_truncatus
ENSCHIG00000016535	SRBD1	99	90.900	ENSUAMG00000008126	SRBD1	97	94.928	Ursus_americanus
ENSCHIG00000016535	SRBD1	100	90.918	ENSUMAG00000012902	SRBD1	100	90.128	Ursus_maritimus
ENSCHIG00000016535	SRBD1	89	94.131	ENSVPAG00000006825	SRBD1	99	94.131	Vicugna_pacos
ENSCHIG00000016535	SRBD1	100	91.008	ENSVVUG00000005389	SRBD1	100	91.357	Vulpes_vulpes
ENSCHIG00000016535	SRBD1	98	51.823	ENSXETG00000002760	srbd1	100	51.156	Xenopus_tropicalis
ENSCHIG00000016535	SRBD1	97	51.076	ENSXMAG00000016861	si:ch211-117n7.8	93	52.567	Xiphophorus_maculatus