EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000016580 (Gene tree)
Gene ID: 102185031
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 400299 bases
Position: chr19:7699916-8100214
Accession: 102185031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000016257	RRM_1	PF00076.22	4.1e-34	1	2
ENSCHIP00000016257	RRM_1	PF00076.22	4.1e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024064	MSI2-201	1018	XM_018064096	ENSCHIP00000016257	328 (aa)	XP_017919585	UPI0005FBE4AC

Gene Model

Click here to download ENSCHIG00000016580's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000016580	MSI2	58	36.126	ENSCHIG00000015099	-	84	36.126
ENSCHIG00000016580	MSI2	56	49.727	ENSCHIG00000010260	-	58	42.800
ENSCHIG00000016580	MSI2	52	37.705	ENSCHIG00000020214	TIA1	71	37.705
ENSCHIG00000016580	MSI2	53	41.279	ENSCHIG00000022444	HNRNPA2B1	58	41.279
ENSCHIG00000016580	MSI2	57	49.198	ENSCHIG00000021687	HNRNPAB	67	48.718
ENSCHIG00000016580	MSI2	62	43.243	ENSCHIG00000009007	RBM3	93	43.243
ENSCHIG00000016580	MSI2	53	43.023	ENSCHIG00000025214	-	61	41.758
ENSCHIG00000016580	MSI2	55	39.560	ENSCHIG00000020945	-	58	39.560
ENSCHIG00000016580	MSI2	57	38.220	ENSCHIG00000015823	-	57	38.220
ENSCHIG00000016580	MSI2	61	45.894	ENSCHIG00000022317	HNRNPD	70	41.152
ENSCHIG00000016580	MSI2	51	43.529	ENSCHIG00000002602	HNRNPA0	60	42.308
ENSCHIG00000016580	MSI2	53	37.209	ENSCHIG00000026095	-	52	37.209
ENSCHIG00000016580	MSI2	51	33.562	ENSCHIG00000026090	TARDBP	53	32.530
ENSCHIG00000016580	MSI2	66	35.455	ENSCHIG00000015804	-	62	35.455
ENSCHIG00000016580	MSI2	53	42.442	ENSCHIG00000008322	-	61	41.209
ENSCHIG00000016580	MSI2	55	31.383	ENSCHIG00000011148	-	57	31.373
ENSCHIG00000016580	MSI2	96	69.602	ENSCHIG00000024304	MSI1	96	68.466
ENSCHIG00000016580	MSI2	53	42.442	ENSCHIG00000011858	-	59	41.209
ENSCHIG00000016580	MSI2	53	43.407	ENSCHIG00000015430	-	61	43.299
ENSCHIG00000016580	MSI2	54	36.111	ENSCHIG00000017826	-	69	32.645
ENSCHIG00000016580	MSI2	53	43.407	ENSCHIG00000025404	-	50	44.022
ENSCHIG00000016580	MSI2	54	41.758	ENSCHIG00000008431	-	72	41.758
ENSCHIG00000016580	MSI2	55	34.737	ENSCHIG00000011332	-	74	36.986
ENSCHIG00000016580	MSI2	51	44.595	ENSCHIG00000021288	CIRBP	56	44.595

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016580	MSI2	100	98.476	ENSG00000153944	MSI2	100	98.476	Homo_sapiens
ENSCHIG00000016580	MSI2	97	91.633	ENSAPOG00000001658	msi2a	100	87.195	Acanthochromis_polyacanthus
ENSCHIG00000016580	MSI2	94	94.154	ENSAMEG00000002697	MSI2	99	94.154	Ailuropoda_melanoleuca
ENSCHIG00000016580	MSI2	100	66.837	ENSACIG00000009475	msi2a	100	66.582	Amphilophus_citrinellus
ENSCHIG00000016580	MSI2	58	74.000	ENSAOCG00000014822	msi2a	69	74.000	Amphiprion_ocellaris
ENSCHIG00000016580	MSI2	100	87.195	ENSAPEG00000007706	msi2a	100	87.195	Amphiprion_percula
ENSCHIG00000016580	MSI2	94	92.806	ENSATEG00000003301	-	100	92.806	Anabas_testudineus
ENSCHIG00000016580	MSI2	97	91.633	ENSATEG00000010498	msi2a	100	87.195	Anabas_testudineus
ENSCHIG00000016580	MSI2	90	97.826	ENSACAG00000005452	MSI2	74	93.939	Anolis_carolinensis
ENSCHIG00000016580	MSI2	100	98.476	ENSANAG00000037827	MSI2	100	98.476	Aotus_nancymaae
ENSCHIG00000016580	MSI2	97	91.235	ENSACLG00000007752	msi2a	100	86.890	Astatotilapia_calliptera
ENSCHIG00000016580	MSI2	94	95.765	ENSAMXG00000010474	msi2b	95	95.765	Astyanax_mexicanus
ENSCHIG00000016580	MSI2	100	92.705	ENSAMXG00000032796	msi2a	100	90.881	Astyanax_mexicanus
ENSCHIG00000016580	MSI2	94	99.349	ENSBTAG00000004406	MSI2	97	99.349	Bos_taurus
ENSCHIG00000016580	MSI2	71	61.290	WBGene00003423	msi-1	75	62.083	Caenorhabditis_elegans
ENSCHIG00000016580	MSI2	100	98.476	ENSCJAG00000013998	MSI2	100	98.476	Callithrix_jacchus
ENSCHIG00000016580	MSI2	94	92.790	ENSCAFG00020025620	MSI2	81	92.790	Canis_lupus_dingo
ENSCHIG00000016580	MSI2	94	95.035	ENSCPOG00000034042	MSI2	99	95.035	Cavia_porcellus
ENSCHIG00000016580	MSI2	100	98.476	ENSCCAG00000033927	MSI2	100	98.476	Cebus_capucinus
ENSCHIG00000016580	MSI2	100	97.866	ENSCATG00000040879	MSI2	100	97.866	Cercocebus_atys
ENSCHIG00000016580	MSI2	100	93.353	ENSCLAG00000014325	MSI2	100	93.353	Chinchilla_lanigera
ENSCHIG00000016580	MSI2	100	98.476	ENSCSAG00000005633	MSI2	100	98.476	Chlorocebus_sabaeus
ENSCHIG00000016580	MSI2	90	69.643	ENSCHOG00000008660	MSI2	100	69.643	Choloepus_hoffmanni
ENSCHIG00000016580	MSI2	94	99.015	ENSCPBG00000009942	MSI2	95	91.386	Chrysemys_picta_bellii
ENSCHIG00000016580	MSI2	87	54.634	ENSCING00000018579	-	97	53.125	Ciona_intestinalis
ENSCHIG00000016580	MSI2	65	66.667	ENSCSAVG00000010397	-	72	65.517	Ciona_savignyi
ENSCHIG00000016580	MSI2	94	99.111	ENSCANG00000036414	MSI2	100	94.136	Colobus_angolensis_palliatus
ENSCHIG00000016580	MSI2	100	98.480	ENSCGRG00001013330	Msi2	100	98.480	Cricetulus_griseus_chok1gshd
ENSCHIG00000016580	MSI2	94	93.865	ENSCGRG00000003141	Msi2	100	93.865	Cricetulus_griseus_crigri
ENSCHIG00000016580	MSI2	100	79.268	ENSCSEG00000003266	-	96	80.892	Cynoglossus_semilaevis
ENSCHIG00000016580	MSI2	61	71.739	ENSCSEG00000013549	msi2a	100	71.739	Cynoglossus_semilaevis
ENSCHIG00000016580	MSI2	78	75.258	ENSCSEG00000013557	msi2a	83	73.711	Cynoglossus_semilaevis
ENSCHIG00000016580	MSI2	100	85.366	ENSCVAG00000017075	msi2a	100	86.455	Cyprinodon_variegatus
ENSCHIG00000016580	MSI2	100	76.289	ENSDARG00000033901	msi2a	100	76.546	Danio_rerio
ENSCHIG00000016580	MSI2	92	92.434	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSCHIG00000016580	MSI2	94	99.653	ENSDNOG00000014501	MSI2	100	99.653	Dasypus_novemcinctus
ENSCHIG00000016580	MSI2	51	100.000	ENSDORG00000028440	-	100	100.000	Dipodomys_ordii
ENSCHIG00000016580	MSI2	78	88.325	ENSDORG00000005394	Msi2	84	87.310	Dipodomys_ordii
ENSCHIG00000016580	MSI2	95	57.265	FBgn0260943	Rbp6	88	68.750	Drosophila_melanogaster
ENSCHIG00000016580	MSI2	67	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSCHIG00000016580	MSI2	88	65.916	ENSEBUG00000006732	msi2a	87	64.309	Eptatretus_burgeri
ENSCHIG00000016580	MSI2	94	95.469	ENSEASG00005002965	MSI2	97	87.143	Equus_asinus_asinus
ENSCHIG00000016580	MSI2	94	98.261	ENSECAG00000011435	MSI2	100	90.960	Equus_caballus
ENSCHIG00000016580	MSI2	82	84.980	ENSEEUG00000007810	MSI2	100	84.980	Erinaceus_europaeus
ENSCHIG00000016580	MSI2	100	82.571	ENSELUG00000001361	msi2b	96	84.226	Esox_lucius
ENSCHIG00000016580	MSI2	100	88.110	ENSELUG00000011747	msi2a	100	88.110	Esox_lucius
ENSCHIG00000016580	MSI2	100	98.476	ENSFCAG00000041686	MSI2	100	98.476	Felis_catus
ENSCHIG00000016580	MSI2	57	77.564	ENSFCAG00000033787	-	82	77.564	Felis_catus
ENSCHIG00000016580	MSI2	94	94.154	ENSFDAG00000016118	MSI2	100	94.154	Fukomys_damarensis
ENSCHIG00000016580	MSI2	97	91.633	ENSFHEG00000000084	msi2a	100	86.890	Fundulus_heteroclitus
ENSCHIG00000016580	MSI2	55	90.385	ENSGMOG00000007596	-	100	90.385	Gadus_morhua
ENSCHIG00000016580	MSI2	100	90.462	ENSGALG00000005567	MSI2	100	90.462	Gallus_gallus
ENSCHIG00000016580	MSI2	96	79.062	ENSGAFG00000006974	msi2a	90	91.391	Gambusia_affinis
ENSCHIG00000016580	MSI2	100	91.549	ENSGAGG00000016542	MSI2	100	89.803	Gopherus_agassizii
ENSCHIG00000016580	MSI2	94	99.111	ENSGGOG00000013182	MSI2	100	94.136	Gorilla_gorilla
ENSCHIG00000016580	MSI2	97	91.235	ENSHBUG00000020800	msi2a	100	86.890	Haplochromis_burtoni
ENSCHIG00000016580	MSI2	100	84.393	ENSHGLG00000012444	MSI2	100	84.393	Heterocephalus_glaber_female
ENSCHIG00000016580	MSI2	51	100.000	ENSHGLG00100004028	-	87	100.000	Heterocephalus_glaber_male
ENSCHIG00000016580	MSI2	75	90.821	ENSHGLG00100003744	MSI2	100	90.821	Heterocephalus_glaber_male
ENSCHIG00000016580	MSI2	97	91.235	ENSHCOG00000000266	msi2a	97	84.024	Hippocampus_comes
ENSCHIG00000016580	MSI2	95	80.303	ENSHCOG00000017241	-	71	80.738	Hippocampus_comes
ENSCHIG00000016580	MSI2	96	93.016	ENSIPUG00000003732	msi2b	100	85.061	Ictalurus_punctatus
ENSCHIG00000016580	MSI2	95	92.213	ENSIPUG00000021097	msi2a	100	86.280	Ictalurus_punctatus
ENSCHIG00000016580	MSI2	94	95.035	ENSSTOG00000007884	MSI2	99	95.035	Ictidomys_tridecemlineatus
ENSCHIG00000016580	MSI2	75	85.427	ENSJJAG00000006292	-	100	84.925	Jaculus_jaculus
ENSCHIG00000016580	MSI2	51	100.000	ENSJJAG00000009467	-	100	100.000	Jaculus_jaculus
ENSCHIG00000016580	MSI2	96	90.476	ENSKMAG00000009494	msi2a	96	90.764	Kryptolebias_marmoratus
ENSCHIG00000016580	MSI2	94	65.396	ENSLBEG00000026223	-	83	85.514	Labrus_bergylta
ENSCHIG00000016580	MSI2	97	91.633	ENSLBEG00000007061	msi2a	100	87.195	Labrus_bergylta
ENSCHIG00000016580	MSI2	51	95.294	ENSLACG00000016798	MSI2	98	89.011	Latimeria_chalumnae
ENSCHIG00000016580	MSI2	100	78.295	ENSLOCG00000004675	msi2b	100	81.301	Lepisosteus_oculatus
ENSCHIG00000016580	MSI2	94	99.111	ENSMFAG00000003775	MSI2	100	94.136	Macaca_fascicularis
ENSCHIG00000016580	MSI2	94	99.111	ENSMMUG00000002069	MSI2	100	94.136	Macaca_mulatta
ENSCHIG00000016580	MSI2	100	98.476	ENSMNEG00000045275	MSI2	100	98.476	Macaca_nemestrina
ENSCHIG00000016580	MSI2	94	99.111	ENSMLEG00000033888	MSI2	100	94.136	Mandrillus_leucophaeus
ENSCHIG00000016580	MSI2	97	91.633	ENSMAMG00000010503	msi2a	100	85.671	Mastacembelus_armatus
ENSCHIG00000016580	MSI2	97	91.235	ENSMAMG00000002488	-	99	90.066	Mastacembelus_armatus
ENSCHIG00000016580	MSI2	100	91.463	ENSMZEG00005007676	msi2a	100	91.463	Maylandia_zebra
ENSCHIG00000016580	MSI2	100	93.372	ENSMAUG00000003862	Msi2	100	93.372	Mesocricetus_auratus
ENSCHIG00000016580	MSI2	100	77.177	ENSMICG00000032913	-	100	78.078	Microcebus_murinus
ENSCHIG00000016580	MSI2	100	98.476	ENSMICG00000013598	-	100	98.476	Microcebus_murinus
ENSCHIG00000016580	MSI2	100	93.642	ENSMOCG00000005820	Msi2	100	93.642	Microtus_ochrogaster
ENSCHIG00000016580	MSI2	90	85.034	ENSMMOG00000008348	msi2a	91	85.174	Mola_mola
ENSCHIG00000016580	MSI2	75	89.372	ENSMODG00000014790	MSI2	100	89.372	Monodelphis_domestica
ENSCHIG00000016580	MSI2	100	85.671	ENSMALG00000000071	msi2a	100	90.850	Monopterus_albus
ENSCHIG00000016580	MSI2	100	98.780	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSCHIG00000016580	MSI2	100	98.780	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSCHIG00000016580	MSI2	100	98.780	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSCHIG00000016580	MSI2	100	98.780	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSCHIG00000016580	MSI2	94	99.674	ENSMPUG00000015377	MSI2	97	99.674	Mustela_putorius_furo
ENSCHIG00000016580	MSI2	94	99.349	ENSMLUG00000007865	MSI2	97	99.349	Myotis_lucifugus
ENSCHIG00000016580	MSI2	100	93.642	ENSNGAG00000017807	Msi2	100	93.642	Nannospalax_galili
ENSCHIG00000016580	MSI2	100	86.890	ENSNBRG00000014596	msi2a	100	86.890	Neolamprologus_brichardi
ENSCHIG00000016580	MSI2	94	99.111	ENSNLEG00000008059	MSI2	95	99.043	Nomascus_leucogenys
ENSCHIG00000016580	MSI2	67	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSCHIG00000016580	MSI2	100	93.353	ENSODEG00000011974	MSI2	100	93.353	Octodon_degus
ENSCHIG00000016580	MSI2	58	91.391	ENSONIG00000001972	msi2a	84	91.391	Oreochromis_niloticus
ENSCHIG00000016580	MSI2	92	95.745	ENSOANG00000005667	MSI2	87	90.000	Ornithorhynchus_anatinus
ENSCHIG00000016580	MSI2	94	99.674	ENSOCUG00000010440	MSI2	97	99.674	Oryctolagus_cuniculus
ENSCHIG00000016580	MSI2	94	93.493	ENSORLG00000009671	msi2a	94	93.493	Oryzias_latipes
ENSCHIG00000016580	MSI2	97	91.633	ENSORLG00020021556	msi2a	94	93.493	Oryzias_latipes_hni
ENSCHIG00000016580	MSI2	94	93.493	ENSORLG00015004592	msi2a	94	93.493	Oryzias_latipes_hsok
ENSCHIG00000016580	MSI2	94	92.027	ENSOMEG00000000146	msi2a	98	92.027	Oryzias_melastigma
ENSCHIG00000016580	MSI2	94	95.114	ENSOGAG00000005621	MSI2	99	95.114	Otolemur_garnettii
ENSCHIG00000016580	MSI2	94	94.136	ENSPPAG00000037697	MSI2	100	94.136	Pan_paniscus
ENSCHIG00000016580	MSI2	94	99.674	ENSPPRG00000001848	MSI2	94	99.674	Panthera_pardus
ENSCHIG00000016580	MSI2	94	93.891	ENSPTIG00000021678	MSI2	96	93.891	Panthera_tigris_altaica
ENSCHIG00000016580	MSI2	74	78.099	ENSPTIG00000021873	-	88	80.172	Panthera_tigris_altaica
ENSCHIG00000016580	MSI2	94	99.111	ENSPTRG00000009437	MSI2	100	94.136	Pan_troglodytes
ENSCHIG00000016580	MSI2	100	98.476	ENSPANG00000022319	MSI2	100	98.476	Papio_anubis
ENSCHIG00000016580	MSI2	96	88.571	ENSPKIG00000007038	-	96	84.545	Paramormyrops_kingsleyae
ENSCHIG00000016580	MSI2	100	96.591	ENSPSIG00000008618	MSI2	83	96.591	Pelodiscus_sinensis
ENSCHIG00000016580	MSI2	100	86.585	ENSPMGG00000005888	msi2a	100	86.585	Periophthalmus_magnuspinnatus
ENSCHIG00000016580	MSI2	51	100.000	ENSPEMG00000021793	-	100	100.000	Peromyscus_maniculatus_bairdii
ENSCHIG00000016580	MSI2	100	88.983	ENSPCIG00000006063	MSI2	100	88.983	Phascolarctos_cinereus
ENSCHIG00000016580	MSI2	57	87.619	ENSPFOG00000019337	MSI2	92	87.619	Poecilia_formosa
ENSCHIG00000016580	MSI2	58	87.413	ENSPLAG00000000436	msi2a	76	88.028	Poecilia_latipinna
ENSCHIG00000016580	MSI2	58	76.923	ENSPMEG00000013247	msi2a	80	76.923	Poecilia_mexicana
ENSCHIG00000016580	MSI2	97	91.633	ENSPREG00000000881	msi2a	99	84.756	Poecilia_reticulata
ENSCHIG00000016580	MSI2	94	96.218	ENSPPYG00000008244	-	100	96.218	Pongo_abelii
ENSCHIG00000016580	MSI2	73	70.168	ENSPCAG00000010552	MSI2	100	70.168	Procavia_capensis
ENSCHIG00000016580	MSI2	52	99.237	ENSPCOG00000019195	-	93	99.237	Propithecus_coquereli
ENSCHIG00000016580	MSI2	94	90.444	ENSPVAG00000017053	MSI2	100	90.444	Pteropus_vampyrus
ENSCHIG00000016580	MSI2	100	91.463	ENSPNYG00000018393	msi2a	100	91.463	Pundamilia_nyererei
ENSCHIG00000016580	MSI2	100	88.754	ENSPNAG00000000844	msi2b	100	87.234	Pygocentrus_nattereri
ENSCHIG00000016580	MSI2	100	92.705	ENSPNAG00000014957	msi2a	100	91.185	Pygocentrus_nattereri
ENSCHIG00000016580	MSI2	94	99.640	ENSRNOG00000025338	Msi2	100	99.640	Rattus_norvegicus
ENSCHIG00000016580	MSI2	52	99.130	ENSRROG00000034421	-	92	99.130	Rhinopithecus_roxellana
ENSCHIG00000016580	MSI2	94	99.554	ENSSBOG00000026425	MSI2	100	94.136	Saimiri_boliviensis_boliviensis
ENSCHIG00000016580	MSI2	94	92.901	ENSSHAG00000008672	MSI2	100	92.901	Sarcophilus_harrisii
ENSCHIG00000016580	MSI2	96	80.816	ENSSFOG00015012168	msi2b	76	80.816	Scleropages_formosus
ENSCHIG00000016580	MSI2	94	89.251	ENSSFOG00015021687	-	97	87.622	Scleropages_formosus
ENSCHIG00000016580	MSI2	97	91.633	ENSSMAG00000018484	msi2a	100	87.195	Scophthalmus_maximus
ENSCHIG00000016580	MSI2	97	91.633	ENSSDUG00000014507	msi2a	100	87.195	Seriola_dumerili
ENSCHIG00000016580	MSI2	100	82.249	ENSSDUG00000021968	-	99	89.404	Seriola_dumerili
ENSCHIG00000016580	MSI2	97	91.633	ENSSLDG00000017172	msi2a	100	87.195	Seriola_lalandi_dorsalis
ENSCHIG00000016580	MSI2	58	91.772	ENSSPUG00000000913	-	94	91.772	Sphenodon_punctatus
ENSCHIG00000016580	MSI2	97	91.633	ENSSPAG00000017793	msi2a	100	81.081	Stegastes_partitus
ENSCHIG00000016580	MSI2	100	98.476	ENSSSCG00000038505	MSI2	100	98.476	Sus_scrofa
ENSCHIG00000016580	MSI2	75	89.855	ENSTGUG00000008452	MSI2	100	89.855	Taeniopygia_guttata
ENSCHIG00000016580	MSI2	100	85.970	ENSTRUG00000021248	msi2a	100	85.970	Takifugu_rubripes
ENSCHIG00000016580	MSI2	74	80.992	ENSTBEG00000001241	MSI2	73	80.992	Tupaia_belangeri
ENSCHIG00000016580	MSI2	94	90.336	ENSTTRG00000002189	MSI2	100	90.336	Tursiops_truncatus
ENSCHIG00000016580	MSI2	94	99.674	ENSUAMG00000000700	MSI2	97	99.674	Ursus_americanus
ENSCHIG00000016580	MSI2	90	91.698	ENSUMAG00000000505	MSI2	95	91.698	Ursus_maritimus
ENSCHIG00000016580	MSI2	55	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSCHIG00000016580	MSI2	100	98.339	ENSVVUG00000011783	MSI2	100	98.339	Vulpes_vulpes
ENSCHIG00000016580	MSI2	96	89.062	ENSXCOG00000006113	msi2a	85	89.062	Xiphophorus_couchianus
ENSCHIG00000016580	MSI2	97	91.633	ENSXMAG00000000608	msi2a	100	86.455	Xiphophorus_maculatus