EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000016737 (Gene tree)
Gene ID: 102169132
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 19715 bases
Position: chr19:27309869-27329583
Accession: 102169132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000016536	ResIII	PF04851.15	2.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024343	CHD3-201	5940	XM_018064597	ENSCHIP00000016536	1979 (aa)	XP_017920086	UPI000D190FC2

Gene Model

Click here to download ENSCHIG00000016737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000016737	CHD3	90	71.508	ENSCHIG00000020766	-	96	69.524
ENSCHIG00000016737	CHD3	94	67.012	ENSCHIG00000015027	CHD5	96	67.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016737	CHD3	100	98.686	ENSG00000170004	CHD3	99	98.686	Homo_sapiens
ENSCHIG00000016737	CHD3	80	80.729	ENSAPOG00000005614	chd3	94	80.729	Acanthochromis_polyacanthus
ENSCHIG00000016737	CHD3	69	97.434	ENSAMEG00000003025	-	100	97.434	Ailuropoda_melanoleuca
ENSCHIG00000016737	CHD3	82	80.303	ENSACIG00000019671	chd3	99	80.303	Amphilophus_citrinellus
ENSCHIG00000016737	CHD3	80	81.250	ENSAOCG00000023784	chd3	97	81.747	Amphiprion_ocellaris
ENSCHIG00000016737	CHD3	75	77.234	ENSAPEG00000006341	chd3	96	73.560	Amphiprion_percula
ENSCHIG00000016737	CHD3	98	72.886	ENSATEG00000000848	chd3	95	82.632	Anabas_testudineus
ENSCHIG00000016737	CHD3	98	85.008	ENSACAG00000004276	CHD3	95	84.588	Anolis_carolinensis
ENSCHIG00000016737	CHD3	100	95.604	ENSANAG00000034323	CHD3	99	98.403	Aotus_nancymaae
ENSCHIG00000016737	CHD3	91	80.707	ENSACLG00000009222	chd3	99	73.508	Astatotilapia_calliptera
ENSCHIG00000016737	CHD3	99	99.238	ENSBTAG00000014377	CHD3	97	99.167	Bos_taurus
ENSCHIG00000016737	CHD3	100	98.383	ENSCJAG00000014766	CHD3	99	98.383	Callithrix_jacchus
ENSCHIG00000016737	CHD3	100	98.383	ENSCAFG00000016859	CHD3	99	98.383	Canis_familiaris
ENSCHIG00000016737	CHD3	95	98.295	ENSCAFG00020007422	CHD3	100	98.418	Canis_lupus_dingo
ENSCHIG00000016737	CHD3	100	98.282	ENSTSYG00000035658	CHD3	99	98.282	Carlito_syrichta
ENSCHIG00000016737	CHD3	100	94.896	ENSCAPG00000014864	CHD3	99	94.896	Cavia_aperea
ENSCHIG00000016737	CHD3	100	97.423	ENSCPOG00000022653	CHD3	99	97.423	Cavia_porcellus
ENSCHIG00000016737	CHD3	100	98.282	ENSCCAG00000034792	CHD3	99	98.282	Cebus_capucinus
ENSCHIG00000016737	CHD3	100	98.535	ENSCATG00000041717	CHD3	99	98.535	Cercocebus_atys
ENSCHIG00000016737	CHD3	99	98.170	ENSCLAG00000010523	CHD3	100	98.170	Chinchilla_lanigera
ENSCHIG00000016737	CHD3	99	98.476	ENSCSAG00000011122	CHD3	99	98.476	Chlorocebus_sabaeus
ENSCHIG00000016737	CHD3	86	86.529	ENSCPBG00000011966	CHD3	99	86.655	Chrysemys_picta_bellii
ENSCHIG00000016737	CHD3	100	98.484	ENSCANG00000037641	CHD3	99	98.484	Colobus_angolensis_palliatus
ENSCHIG00000016737	CHD3	99	97.256	ENSCGRG00001011306	Chd3	100	97.256	Cricetulus_griseus_chok1gshd
ENSCHIG00000016737	CHD3	94	97.059	ENSCGRG00000007878	Chd3	99	97.059	Cricetulus_griseus_crigri
ENSCHIG00000016737	CHD3	90	79.605	ENSCSEG00000004489	chd3	99	77.116	Cynoglossus_semilaevis
ENSCHIG00000016737	CHD3	87	82.869	ENSCVAG00000007293	chd3	95	82.869	Cyprinodon_variegatus
ENSCHIG00000016737	CHD3	88	82.609	ENSDARG00000021405	chd3	99	75.602	Danio_rerio
ENSCHIG00000016737	CHD3	99	83.814	ENSDNOG00000047846	CHD3	98	83.814	Dasypus_novemcinctus
ENSCHIG00000016737	CHD3	99	97.763	ENSDORG00000010713	Chd3	100	97.763	Dipodomys_ordii
ENSCHIG00000016737	CHD3	97	92.060	ENSETEG00000017733	CHD3	100	92.060	Echinops_telfairi
ENSCHIG00000016737	CHD3	54	77.849	ENSEBUG00000008310	chd3	99	70.288	Eptatretus_burgeri
ENSCHIG00000016737	CHD3	93	98.582	ENSEASG00005019360	CHD3	100	98.582	Equus_asinus_asinus
ENSCHIG00000016737	CHD3	93	98.636	ENSECAG00000010051	CHD3	100	98.636	Equus_caballus
ENSCHIG00000016737	CHD3	92	94.915	ENSEEUG00000015205	CHD3	92	96.154	Erinaceus_europaeus
ENSCHIG00000016737	CHD3	79	77.435	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSCHIG00000016737	CHD3	99	97.967	ENSFCAG00000009629	CHD3	96	97.967	Felis_catus
ENSCHIG00000016737	CHD3	99	95.732	ENSFDAG00000008220	CHD3	99	95.397	Fukomys_damarensis
ENSCHIG00000016737	CHD3	88	80.406	ENSGMOG00000013599	chd3	91	81.015	Gadus_morhua
ENSCHIG00000016737	CHD3	59	75.171	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSCHIG00000016737	CHD3	98	70.755	ENSGACG00000019275	chd3	100	71.012	Gasterosteus_aculeatus
ENSCHIG00000016737	CHD3	76	85.533	ENSGAGG00000013164	CHD3	98	86.181	Gopherus_agassizii
ENSCHIG00000016737	CHD3	100	98.535	ENSGGOG00000013496	CHD3	99	98.535	Gorilla_gorilla
ENSCHIG00000016737	CHD3	99	98.018	ENSHGLG00000012017	CHD3	99	98.018	Heterocephalus_glaber_female
ENSCHIG00000016737	CHD3	89	91.014	ENSHGLG00100013902	CHD3	99	91.014	Heterocephalus_glaber_male
ENSCHIG00000016737	CHD3	94	72.179	ENSHCOG00000010170	chd3	96	72.912	Hippocampus_comes
ENSCHIG00000016737	CHD3	84	80.495	ENSIPUG00000003271	chd3	96	80.111	Ictalurus_punctatus
ENSCHIG00000016737	CHD3	100	98.029	ENSSTOG00000025907	CHD3	99	98.323	Ictidomys_tridecemlineatus
ENSCHIG00000016737	CHD3	100	96.867	ENSJJAG00000017633	Chd3	100	97.204	Jaculus_jaculus
ENSCHIG00000016737	CHD3	86	90.047	ENSKMAG00000019292	chd3	97	74.590	Kryptolebias_marmoratus
ENSCHIG00000016737	CHD3	90	73.545	ENSLBEG00000028485	chd3	92	80.469	Labrus_bergylta
ENSCHIG00000016737	CHD3	96	74.455	ENSLACG00000008031	CHD3	99	73.353	Latimeria_chalumnae
ENSCHIG00000016737	CHD3	98	76.692	ENSLOCG00000013965	chd3	97	77.300	Lepisosteus_oculatus
ENSCHIG00000016737	CHD3	95	94.330	ENSLAFG00000000572	CHD3	100	94.330	Loxodonta_africana
ENSCHIG00000016737	CHD3	100	98.484	ENSMFAG00000020113	CHD3	99	98.484	Macaca_fascicularis
ENSCHIG00000016737	CHD3	100	96.109	ENSMMUG00000022221	CHD3	99	96.109	Macaca_mulatta
ENSCHIG00000016737	CHD3	100	98.484	ENSMNEG00000001728	CHD3	99	98.484	Macaca_nemestrina
ENSCHIG00000016737	CHD3	100	98.535	ENSMLEG00000032249	CHD3	99	98.535	Mandrillus_leucophaeus
ENSCHIG00000016737	CHD3	86	75.731	ENSMAMG00000000564	chd3	99	75.146	Mastacembelus_armatus
ENSCHIG00000016737	CHD3	100	96.768	ENSMAUG00000013873	Chd3	99	94.423	Mesocricetus_auratus
ENSCHIG00000016737	CHD3	99	98.222	ENSMICG00000008741	CHD3	99	95.392	Microcebus_murinus
ENSCHIG00000016737	CHD3	99	97.301	ENSMOCG00000004848	Chd3	100	97.301	Microtus_ochrogaster
ENSCHIG00000016737	CHD3	95	74.035	ENSMMOG00000012699	chd3	99	73.579	Mola_mola
ENSCHIG00000016737	CHD3	93	92.748	ENSMODG00000007509	CHD3	100	92.748	Monodelphis_domestica
ENSCHIG00000016737	CHD3	99	96.854	MGP_CAROLIEiJ_G0016564	Chd3	100	95.521	Mus_caroli
ENSCHIG00000016737	CHD3	99	96.956	ENSMUSG00000018474	Chd3	99	95.625	Mus_musculus
ENSCHIG00000016737	CHD3	99	97.107	MGP_PahariEiJ_G0017695	Chd3	100	95.779	Mus_pahari
ENSCHIG00000016737	CHD3	99	96.956	MGP_SPRETEiJ_G0017400	Chd3	100	95.625	Mus_spretus
ENSCHIG00000016737	CHD3	87	98.250	ENSMPUG00000008861	CHD3	100	98.250	Mustela_putorius_furo
ENSCHIG00000016737	CHD3	100	97.426	ENSMLUG00000014643	-	99	97.426	Myotis_lucifugus
ENSCHIG00000016737	CHD3	99	97.614	ENSNGAG00000000773	Chd3	98	97.614	Nannospalax_galili
ENSCHIG00000016737	CHD3	86	75.411	ENSNBRG00000000636	chd3	97	75.894	Neolamprologus_brichardi
ENSCHIG00000016737	CHD3	99	94.764	ENSNLEG00000009770	CHD3	100	95.537	Nomascus_leucogenys
ENSCHIG00000016737	CHD3	85	90.934	ENSMEUG00000005852	CHD3	87	90.934	Notamacropus_eugenii
ENSCHIG00000016737	CHD3	95	96.530	ENSOPRG00000011069	CHD3	100	96.530	Ochotona_princeps
ENSCHIG00000016737	CHD3	99	97.224	ENSODEG00000017785	CHD3	99	97.224	Octodon_degus
ENSCHIG00000016737	CHD3	75	77.683	ENSONIG00000009292	chd3	100	75.128	Oreochromis_niloticus
ENSCHIG00000016737	CHD3	99	93.388	ENSOCUG00000029299	CHD3	100	93.238	Oryctolagus_cuniculus
ENSCHIG00000016737	CHD3	82	70.386	ENSORLG00000007107	chd3	87	75.668	Oryzias_latipes
ENSCHIG00000016737	CHD3	57	72.639	ENSORLG00020008387	chd3	95	73.522	Oryzias_latipes_hni
ENSCHIG00000016737	CHD3	70	80.429	ENSOMEG00000013691	chd3	99	77.161	Oryzias_melastigma
ENSCHIG00000016737	CHD3	99	97.815	ENSOGAG00000003216	CHD3	99	97.815	Otolemur_garnettii
ENSCHIG00000016737	CHD3	100	97.477	ENSOARG00000017855	CHD3	99	97.477	Ovis_aries
ENSCHIG00000016737	CHD3	100	96.315	ENSPPAG00000032886	CHD3	99	96.315	Pan_paniscus
ENSCHIG00000016737	CHD3	100	97.979	ENSPPRG00000000626	CHD3	99	97.979	Panthera_pardus
ENSCHIG00000016737	CHD3	100	98.737	ENSPTRG00000008714	CHD3	99	98.737	Pan_troglodytes
ENSCHIG00000016737	CHD3	100	98.535	ENSPANG00000023938	CHD3	99	98.535	Papio_anubis
ENSCHIG00000016737	CHD3	98	75.125	ENSPKIG00000006305	chd3	99	79.102	Paramormyrops_kingsleyae
ENSCHIG00000016737	CHD3	55	90.328	ENSPSIG00000010177	CHD3	98	90.602	Pelodiscus_sinensis
ENSCHIG00000016737	CHD3	99	96.716	ENSPEMG00000014262	Chd3	99	96.716	Peromyscus_maniculatus_bairdii
ENSCHIG00000016737	CHD3	99	92.890	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSCHIG00000016737	CHD3	75	76.667	ENSPFOG00000012464	chd3	92	73.882	Poecilia_formosa
ENSCHIG00000016737	CHD3	87	83.806	ENSPLAG00000002887	chd3	96	83.806	Poecilia_latipinna
ENSCHIG00000016737	CHD3	53	81.723	ENSPMEG00000016725	chd3	94	73.160	Poecilia_mexicana
ENSCHIG00000016737	CHD3	91	80.769	ENSPREG00000011044	chd3	99	78.585	Poecilia_reticulata
ENSCHIG00000016737	CHD3	100	93.936	ENSPPYG00000007940	CHD3	99	93.936	Pongo_abelii
ENSCHIG00000016737	CHD3	96	98.016	ENSPCAG00000004350	CHD3	96	98.016	Procavia_capensis
ENSCHIG00000016737	CHD3	99	98.171	ENSPCOG00000020952	CHD3	99	98.072	Propithecus_coquereli
ENSCHIG00000016737	CHD3	86	97.565	ENSPVAG00000016344	CHD3	87	97.565	Pteropus_vampyrus
ENSCHIG00000016737	CHD3	89	80.014	ENSPNAG00000020393	chd3	98	80.292	Pygocentrus_nattereri
ENSCHIG00000016737	CHD3	93	96.732	ENSRNOG00000009722	Chd3	100	96.732	Rattus_norvegicus
ENSCHIG00000016737	CHD3	100	95.359	ENSRBIG00000033562	CHD3	99	95.359	Rhinopithecus_bieti
ENSCHIG00000016737	CHD3	100	96.903	ENSRROG00000029554	CHD3	100	96.586	Rhinopithecus_roxellana
ENSCHIG00000016737	CHD3	100	98.434	ENSSBOG00000020719	CHD3	99	98.434	Saimiri_boliviensis_boliviensis
ENSCHIG00000016737	CHD3	99	92.959	ENSSHAG00000014412	CHD3	100	92.959	Sarcophilus_harrisii
ENSCHIG00000016737	CHD3	87	79.957	ENSSFOG00015023123	chd3	98	74.870	Scleropages_formosus
ENSCHIG00000016737	CHD3	78	91.358	ENSSMAG00000006451	chd3	100	74.789	Scophthalmus_maximus
ENSCHIG00000016737	CHD3	55	73.260	ENSSDUG00000005792	chd3	95	73.535	Seriola_dumerili
ENSCHIG00000016737	CHD3	79	81.053	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSCHIG00000016737	CHD3	99	98.327	ENSSSCG00000021363	CHD3	100	98.419	Sus_scrofa
ENSCHIG00000016737	CHD3	75	76.560	ENSTRUG00000014990	chd3	89	76.238	Takifugu_rubripes
ENSCHIG00000016737	CHD3	97	72.598	ENSTNIG00000012998	chd3	99	72.228	Tetraodon_nigroviridis
ENSCHIG00000016737	CHD3	63	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCHIG00000016737	CHD3	98	99.049	ENSTTRG00000010295	CHD3	97	99.049	Tursiops_truncatus
ENSCHIG00000016737	CHD3	93	97.333	ENSUAMG00000005475	CHD3	99	97.333	Ursus_americanus
ENSCHIG00000016737	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCHIG00000016737	CHD3	96	98.256	ENSVVUG00000028011	CHD3	99	98.295	Vulpes_vulpes
ENSCHIG00000016737	CHD3	98	72.487	ENSXETG00000012991	chd3	92	73.648	Xenopus_tropicalis
ENSCHIG00000016737	CHD3	51	83.202	ENSXCOG00000000809	chd3	96	83.089	Xiphophorus_couchianus
ENSCHIG00000016737	CHD3	79	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus