EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000016849 (Gene tree)
Gene ID: 102177017
Gene Symbol: RPP40
Alias: RNASEP1|bA428J1.3
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 9000 bases
Position: chr23:16075269-16084268
Accession: 102177017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000016687	Ribonuc_P_40	PF08584.11	7.7e-90	1	1
ENSCHIP00000016680	Ribonuc_P_40	PF08584.11	1.3e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024495	RPP40-202	1498	-	ENSCHIP00000016687	302 (aa)	-	UPI000D1946DF
ENSCHIT00000024488	RPP40-201	1089	XM_018039263	ENSCHIP00000016680	362 (aa)	XP_017894752	UPI0006B14161

Gene Model

Click here to download ENSCHIG00000016849's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG
chx03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016849	RPP40	100	82.369	ENSG00000124787	RPP40	100	82.369	Homo_sapiens
ENSCHIG00000016849	RPP40	100	86.501	ENSAMEG00000012938	RPP40	100	86.501	Ailuropoda_melanoleuca
ENSCHIG00000016849	RPP40	99	37.049	ENSACIG00000003617	rpp40	98	37.119	Amphilophus_citrinellus
ENSCHIG00000016849	RPP40	99	39.000	ENSAOCG00000011846	rpp40	99	37.921	Amphiprion_ocellaris
ENSCHIG00000016849	RPP40	99	39.000	ENSAPEG00000001322	rpp40	99	37.921	Amphiprion_percula
ENSCHIG00000016849	RPP40	99	38.816	ENSATEG00000006584	rpp40	99	38.611	Anabas_testudineus
ENSCHIG00000016849	RPP40	99	67.550	ENSAPLG00000005691	RPP40	99	67.550	Anas_platyrhynchos
ENSCHIG00000016849	RPP40	99	66.777	ENSACAG00000006550	RPP40	88	64.903	Anolis_carolinensis
ENSCHIG00000016849	RPP40	100	81.543	ENSANAG00000029246	RPP40	100	81.543	Aotus_nancymaae
ENSCHIG00000016849	RPP40	98	38.418	ENSACLG00000015883	rpp40	96	38.418	Astatotilapia_calliptera
ENSCHIG00000016849	RPP40	99	49.667	ENSAMXG00000001755	rpp40	99	49.438	Astyanax_mexicanus
ENSCHIG00000016849	RPP40	100	95.041	ENSBTAG00000003332	RPP40	100	95.041	Bos_taurus
ENSCHIG00000016849	RPP40	100	81.543	ENSCJAG00000021373	RPP40	100	81.543	Callithrix_jacchus
ENSCHIG00000016849	RPP40	100	86.501	ENSCAFG00000009435	RPP40	100	86.501	Canis_familiaris
ENSCHIG00000016849	RPP40	100	86.501	ENSCAFG00020013380	RPP40	100	86.501	Canis_lupus_dingo
ENSCHIG00000016849	RPP40	100	85.124	ENSTSYG00000032857	RPP40	100	85.124	Carlito_syrichta
ENSCHIG00000016849	RPP40	100	75.248	ENSCAPG00000004957	RPP40	98	75.229	Cavia_aperea
ENSCHIG00000016849	RPP40	100	82.645	ENSCPOG00000005855	RPP40	100	82.645	Cavia_porcellus
ENSCHIG00000016849	RPP40	100	81.543	ENSCCAG00000019809	RPP40	100	81.543	Cebus_capucinus
ENSCHIG00000016849	RPP40	100	82.369	ENSCATG00000038787	RPP40	100	82.369	Cercocebus_atys
ENSCHIG00000016849	RPP40	100	83.196	ENSCLAG00000003235	RPP40	100	83.196	Chinchilla_lanigera
ENSCHIG00000016849	RPP40	100	82.645	ENSCSAG00000007307	RPP40	100	82.645	Chlorocebus_sabaeus
ENSCHIG00000016849	RPP40	82	66.800	ENSCHOG00000005856	-	100	66.800	Choloepus_hoffmanni
ENSCHIG00000016849	RPP40	99	70.861	ENSCPBG00000009003	RPP40	99	70.000	Chrysemys_picta_bellii
ENSCHIG00000016849	RPP40	100	82.645	ENSCANG00000033965	RPP40	100	82.645	Colobus_angolensis_palliatus
ENSCHIG00000016849	RPP40	100	79.868	ENSCGRG00001018328	Rpp40	100	79.614	Cricetulus_griseus_chok1gshd
ENSCHIG00000016849	RPP40	100	79.868	ENSCGRG00000011344	Rpp40	100	79.614	Cricetulus_griseus_crigri
ENSCHIG00000016849	RPP40	99	35.099	ENSCSEG00000015006	-	98	35.493	Cynoglossus_semilaevis
ENSCHIG00000016849	RPP40	89	35.294	ENSCVAG00000012169	rpp40	100	35.294	Cyprinodon_variegatus
ENSCHIG00000016849	RPP40	99	50.139	ENSDARG00000017605	rpp40	99	50.139	Danio_rerio
ENSCHIG00000016849	RPP40	82	79.798	ENSDNOG00000048136	RPP40	99	79.798	Dasypus_novemcinctus
ENSCHIG00000016849	RPP40	100	79.890	ENSDORG00000029944	-	100	79.890	Dipodomys_ordii
ENSCHIG00000016849	RPP40	100	60.160	ENSDORG00000011196	-	100	60.160	Dipodomys_ordii
ENSCHIG00000016849	RPP40	100	65.565	ENSETEG00000007458	RPP40	100	65.565	Echinops_telfairi
ENSCHIG00000016849	RPP40	98	45.352	ENSEBUG00000000386	rpp40	99	45.352	Eptatretus_burgeri
ENSCHIG00000016849	RPP40	100	85.399	ENSEASG00005012116	RPP40	80	85.399	Equus_asinus_asinus
ENSCHIG00000016849	RPP40	100	85.675	ENSECAG00000017247	RPP40	80	85.675	Equus_caballus
ENSCHIG00000016849	RPP40	82	64.310	ENSEEUG00000012087	RPP40	100	64.310	Erinaceus_europaeus
ENSCHIG00000016849	RPP40	99	49.007	ENSELUG00000017004	rpp40	99	48.603	Esox_lucius
ENSCHIG00000016849	RPP40	100	87.328	ENSFCAG00000009249	RPP40	100	87.328	Felis_catus
ENSCHIG00000016849	RPP40	99	65.823	ENSFALG00000013166	RPP40	100	64.526	Ficedula_albicollis
ENSCHIG00000016849	RPP40	96	67.808	ENSFDAG00000000265	-	99	67.808	Fukomys_damarensis
ENSCHIG00000016849	RPP40	100	85.124	ENSFDAG00000013001	-	100	85.124	Fukomys_damarensis
ENSCHIG00000016849	RPP40	99	40.333	ENSFHEG00000021429	rpp40	88	40.730	Fundulus_heteroclitus
ENSCHIG00000016849	RPP40	98	37.710	ENSGMOG00000018653	rpp40	100	37.383	Gadus_morhua
ENSCHIG00000016849	RPP40	99	65.563	ENSGALG00000036074	RPP40	99	64.722	Gallus_gallus
ENSCHIG00000016849	RPP40	99	35.333	ENSGAFG00000004189	-	99	35.333	Gambusia_affinis
ENSCHIG00000016849	RPP40	98	38.764	ENSGACG00000002472	rpp40	99	38.764	Gasterosteus_aculeatus
ENSCHIG00000016849	RPP40	99	71.854	ENSGAGG00000012918	RPP40	99	70.833	Gopherus_agassizii
ENSCHIG00000016849	RPP40	100	82.645	ENSGGOG00000013764	RPP40	100	82.645	Gorilla_gorilla
ENSCHIG00000016849	RPP40	99	38.614	ENSHBUG00000009378	rpp40	93	37.994	Haplochromis_burtoni
ENSCHIG00000016849	RPP40	100	85.399	ENSHGLG00000004871	RPP40	100	85.399	Heterocephalus_glaber_female
ENSCHIG00000016849	RPP40	100	85.675	ENSHGLG00100002080	RPP40	100	85.675	Heterocephalus_glaber_male
ENSCHIG00000016849	RPP40	98	32.660	ENSHCOG00000013264	-	93	32.471	Hippocampus_comes
ENSCHIG00000016849	RPP40	99	47.075	ENSIPUG00000008951	RPP40	99	47.075	Ictalurus_punctatus
ENSCHIG00000016849	RPP40	100	81.818	ENSSTOG00000011199	RPP40	100	81.818	Ictidomys_tridecemlineatus
ENSCHIG00000016849	RPP40	100	77.348	ENSJJAG00000020629	Rpp40	100	77.348	Jaculus_jaculus
ENSCHIG00000016849	RPP40	99	37.333	ENSKMAG00000019358	rpp40	99	37.640	Kryptolebias_marmoratus
ENSCHIG00000016849	RPP40	99	39.000	ENSLBEG00000022724	rpp40	99	39.326	Labrus_bergylta
ENSCHIG00000016849	RPP40	99	58.056	ENSLACG00000014848	RPP40	99	58.056	Latimeria_chalumnae
ENSCHIG00000016849	RPP40	100	52.342	ENSLOCG00000011650	rpp40	100	52.342	Lepisosteus_oculatus
ENSCHIG00000016849	RPP40	100	82.178	ENSLAFG00000007530	RPP40	100	82.178	Loxodonta_africana
ENSCHIG00000016849	RPP40	100	82.094	ENSMFAG00000043100	RPP40	100	82.094	Macaca_fascicularis
ENSCHIG00000016849	RPP40	100	82.369	ENSMMUG00000004966	RPP40	100	82.369	Macaca_mulatta
ENSCHIG00000016849	RPP40	100	82.369	ENSMNEG00000041986	RPP40	100	82.369	Macaca_nemestrina
ENSCHIG00000016849	RPP40	98	73.109	ENSMLEG00000040851	RPP40	100	78.161	Mandrillus_leucophaeus
ENSCHIG00000016849	RPP40	99	37.667	ENSMAMG00000019551	rpp40	98	38.202	Mastacembelus_armatus
ENSCHIG00000016849	RPP40	99	39.667	ENSMZEG00005019475	rpp40	99	38.889	Maylandia_zebra
ENSCHIG00000016849	RPP40	99	66.887	ENSMGAG00000004009	RPP40	99	61.944	Meleagris_gallopavo
ENSCHIG00000016849	RPP40	100	82.094	ENSMAUG00000010268	Rpp40	100	82.094	Mesocricetus_auratus
ENSCHIG00000016849	RPP40	100	84.022	ENSMICG00000003297	RPP40	100	78.237	Microcebus_murinus
ENSCHIG00000016849	RPP40	100	81.267	ENSMOCG00000000305	Rpp40	100	81.267	Microtus_ochrogaster
ENSCHIG00000016849	RPP40	98	33.989	ENSMMOG00000020591	-	99	33.989	Mola_mola
ENSCHIG00000016849	RPP40	100	77.473	ENSMODG00000009826	RPP40	100	77.473	Monodelphis_domestica
ENSCHIG00000016849	RPP40	99	38.000	ENSMALG00000020133	rpp40	99	38.202	Monopterus_albus
ENSCHIG00000016849	RPP40	100	83.471	MGP_CAROLIEiJ_G0018429	Rpp40	100	83.471	Mus_caroli
ENSCHIG00000016849	RPP40	100	84.298	ENSMUSG00000021418	Rpp40	100	84.298	Mus_musculus
ENSCHIG00000016849	RPP40	100	82.920	MGP_PahariEiJ_G0019497	Rpp40	100	82.920	Mus_pahari
ENSCHIG00000016849	RPP40	100	83.747	MGP_SPRETEiJ_G0019309	Rpp40	100	83.747	Mus_spretus
ENSCHIG00000016849	RPP40	100	86.501	ENSMPUG00000000530	RPP40	93	86.501	Mustela_putorius_furo
ENSCHIG00000016849	RPP40	100	83.471	ENSMLUG00000000501	RPP40	100	83.471	Myotis_lucifugus
ENSCHIG00000016849	RPP40	100	82.369	ENSNGAG00000023955	-	100	82.369	Nannospalax_galili
ENSCHIG00000016849	RPP40	95	73.333	ENSNGAG00000022529	-	100	73.333	Nannospalax_galili
ENSCHIG00000016849	RPP40	99	35.526	ENSNBRG00000017465	rpp40	86	34.969	Neolamprologus_brichardi
ENSCHIG00000016849	RPP40	100	81.818	ENSNLEG00000034397	RPP40	100	81.818	Nomascus_leucogenys
ENSCHIG00000016849	RPP40	100	72.452	ENSMEUG00000005300	RPP40	100	72.452	Notamacropus_eugenii
ENSCHIG00000016849	RPP40	100	74.587	ENSODEG00000006170	-	100	75.466	Octodon_degus
ENSCHIG00000016849	RPP40	100	78.237	ENSODEG00000018153	-	100	78.237	Octodon_degus
ENSCHIG00000016849	RPP40	100	82.645	ENSODEG00000007255	-	100	82.645	Octodon_degus
ENSCHIG00000016849	RPP40	99	38.667	ENSONIG00000014016	rpp40	99	38.056	Oreochromis_niloticus
ENSCHIG00000016849	RPP40	99	73.090	ENSOANG00000001200	RPP40	99	73.422	Ornithorhynchus_anatinus
ENSCHIG00000016849	RPP40	99	73.333	ENSOCUG00000000354	RPP40	99	72.576	Oryctolagus_cuniculus
ENSCHIG00000016849	RPP40	99	37.047	ENSORLG00000008242	-	100	37.047	Oryzias_latipes
ENSCHIG00000016849	RPP40	99	37.333	ENSORLG00020013745	-	91	37.047	Oryzias_latipes_hni
ENSCHIG00000016849	RPP40	99	37.333	ENSORLG00015000887	-	100	37.326	Oryzias_latipes_hsok
ENSCHIG00000016849	RPP40	99	38.000	ENSOMEG00000002747	rpp40	100	37.883	Oryzias_melastigma
ENSCHIG00000016849	RPP40	100	83.747	ENSOGAG00000006055	RPP40	100	83.747	Otolemur_garnettii
ENSCHIG00000016849	RPP40	100	98.013	ENSOARG00000018783	RPP40	100	98.013	Ovis_aries
ENSCHIG00000016849	RPP40	100	82.094	ENSPPAG00000023703	RPP40	100	82.094	Pan_paniscus
ENSCHIG00000016849	RPP40	100	87.052	ENSPPRG00000005612	RPP40	100	87.052	Panthera_pardus
ENSCHIG00000016849	RPP40	100	80.992	ENSPTIG00000018847	RPP40	100	80.992	Panthera_tigris_altaica
ENSCHIG00000016849	RPP40	100	82.369	ENSPTRG00000017690	RPP40	100	82.369	Pan_troglodytes
ENSCHIG00000016849	RPP40	100	82.094	ENSPANG00000017865	RPP40	100	82.094	Papio_anubis
ENSCHIG00000016849	RPP40	99	51.532	ENSPKIG00000006311	rpp40	99	51.532	Paramormyrops_kingsleyae
ENSCHIG00000016849	RPP40	73	69.369	ENSPSIG00000007854	RPP40	100	69.369	Pelodiscus_sinensis
ENSCHIG00000016849	RPP40	97	75.768	ENSPEMG00000020809	Rpp40	91	71.513	Peromyscus_maniculatus_bairdii
ENSCHIG00000016849	RPP40	90	45.985	ENSPMAG00000008412	rpp40	99	45.985	Petromyzon_marinus
ENSCHIG00000016849	RPP40	100	79.339	ENSPCIG00000010682	RPP40	100	79.339	Phascolarctos_cinereus
ENSCHIG00000016849	RPP40	99	38.411	ENSPFOG00000011460	rpp40	98	37.989	Poecilia_formosa
ENSCHIG00000016849	RPP40	99	38.333	ENSPLAG00000001334	rpp40	99	38.202	Poecilia_latipinna
ENSCHIG00000016849	RPP40	99	39.000	ENSPMEG00000007721	rpp40	99	38.483	Poecilia_mexicana
ENSCHIG00000016849	RPP40	99	38.667	ENSPREG00000009215	rpp40	99	38.764	Poecilia_reticulata
ENSCHIG00000016849	RPP40	100	82.369	ENSPPYG00000016194	RPP40	100	82.369	Pongo_abelii
ENSCHIG00000016849	RPP40	51	85.326	ENSPCAG00000002700	-	99	85.326	Procavia_capensis
ENSCHIG00000016849	RPP40	100	84.298	ENSPCOG00000003907	RPP40	100	84.298	Propithecus_coquereli
ENSCHIG00000016849	RPP40	100	84.848	ENSPVAG00000011325	RPP40	100	84.848	Pteropus_vampyrus
ENSCHIG00000016849	RPP40	99	38.333	ENSPNYG00000004432	rpp40	99	38.333	Pundamilia_nyererei
ENSCHIG00000016849	RPP40	99	47.682	ENSPNAG00000019125	rpp40	99	46.648	Pygocentrus_nattereri
ENSCHIG00000016849	RPP40	100	82.920	ENSRNOG00000016226	Rpp40	100	82.920	Rattus_norvegicus
ENSCHIG00000016849	RPP40	100	82.920	ENSRBIG00000035800	RPP40	100	82.920	Rhinopithecus_bieti
ENSCHIG00000016849	RPP40	100	82.920	ENSRROG00000039116	RPP40	100	82.920	Rhinopithecus_roxellana
ENSCHIG00000016849	RPP40	100	81.543	ENSSBOG00000020297	RPP40	100	81.543	Saimiri_boliviensis_boliviensis
ENSCHIG00000016849	RPP40	92	76.978	ENSSHAG00000002102	RPP40	100	76.978	Sarcophilus_harrisii
ENSCHIG00000016849	RPP40	99	51.815	ENSSFOG00015001142	rpp40	81	50.689	Scleropages_formosus
ENSCHIG00000016849	RPP40	99	38.000	ENSSDUG00000007202	rpp40	99	38.202	Seriola_dumerili
ENSCHIG00000016849	RPP40	99	38.333	ENSSLDG00000017563	rpp40	99	38.483	Seriola_lalandi_dorsalis
ENSCHIG00000016849	RPP40	97	66.441	ENSSPUG00000018950	-	100	66.441	Sphenodon_punctatus
ENSCHIG00000016849	RPP40	99	68.874	ENSSPUG00000017487	-	99	67.778	Sphenodon_punctatus
ENSCHIG00000016849	RPP40	98	38.851	ENSSPAG00000022716	rpp40	99	38.202	Stegastes_partitus
ENSCHIG00000016849	RPP40	100	83.747	ENSSSCG00000000998	RPP40	100	83.747	Sus_scrofa
ENSCHIG00000016849	RPP40	58	68.362	ENSTGUG00000015246	-	100	68.362	Taeniopygia_guttata
ENSCHIG00000016849	RPP40	99	68.212	ENSTGUG00000002258	-	100	65.642	Taeniopygia_guttata
ENSCHIG00000016849	RPP40	99	39.000	ENSTRUG00000003755	rpp40	98	39.205	Takifugu_rubripes
ENSCHIG00000016849	RPP40	99	37.333	ENSTNIG00000003077	rpp40	98	38.068	Tetraodon_nigroviridis
ENSCHIG00000016849	RPP40	82	56.400	ENSTBEG00000014467	-	73	56.400	Tupaia_belangeri
ENSCHIG00000016849	RPP40	99	81.768	ENSTTRG00000007319	RPP40	100	81.768	Tursiops_truncatus
ENSCHIG00000016849	RPP40	100	87.052	ENSUAMG00000002159	RPP40	100	87.052	Ursus_americanus
ENSCHIG00000016849	RPP40	100	87.052	ENSUMAG00000018639	RPP40	94	87.052	Ursus_maritimus
ENSCHIG00000016849	RPP40	81	63.605	ENSVPAG00000004652	-	99	63.605	Vicugna_pacos
ENSCHIG00000016849	RPP40	100	86.501	ENSVVUG00000005451	RPP40	100	86.501	Vulpes_vulpes
ENSCHIG00000016849	RPP40	100	55.921	ENSXETG00000017617	rpp40	100	54.795	Xenopus_tropicalis
ENSCHIG00000016849	RPP40	57	52.381	ENSXCOG00000019991	-	87	32.277	Xiphophorus_couchianus
ENSCHIG00000016849	RPP40	98	31.944	ENSXMAG00000024940	rpp40	98	31.944	Xiphophorus_maculatus