EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000016912 (Gene tree)
Gene ID: 102169829
Gene Symbol: GARS
Alias: CMT2D|DSMAV|GlyRS|SMAD1
Full Name: glycyl-tRNA synthetase
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 73487 bases
Position: chr4:54487648-54561134
Accession: 102169829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000016843	HGTP_anticodon	PF03129.20	1e-23	1	1
ENSCHIP00000016864	HGTP_anticodon	PF03129.20	1.7e-23	1	1
ENSCHIP00000016825	HGTP_anticodon	PF03129.20	2e-23	1	1
ENSCHIP00000016843	tRNA-synt_2b	PF00587.25	1.1e-10	1	1
ENSCHIP00000016864	tRNA-synt_2b	PF00587.25	1.8e-10	1	1
ENSCHIP00000016825	tRNA-synt_2b	PF00587.25	2.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024673	GARS-203	2106	-	ENSCHIP00000016864	701 (aa)	-	UPI000D18F071
ENSCHIT00000024634	GARS-201	3930	XM_018047109	ENSCHIP00000016825	836 (aa)	XP_017902598	UPI000D190629
ENSCHIT00000024651	GARS-202	2717	-	ENSCHIP00000016843	616 (aa)	-	UPI000D1926D7

Gene Model

Click here to download ENSCHIG00000016912's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016912	GARS	100	95.130	ENSG00000106105	GARS	97	93.056	Homo_sapiens
ENSCHIG00000016912	GARS	100	86.039	ENSAPOG00000019999	gars	95	81.958	Acanthochromis_polyacanthus
ENSCHIG00000016912	GARS	99	79.805	ENSAPOG00000020089	gars	99	78.434	Acanthochromis_polyacanthus
ENSCHIG00000016912	GARS	100	96.104	ENSAMEG00000006652	GARS	100	94.181	Ailuropoda_melanoleuca
ENSCHIG00000016912	GARS	100	86.526	ENSACIG00000020744	gars	94	83.665	Amphilophus_citrinellus
ENSCHIG00000016912	GARS	99	83.824	ENSACIG00000020797	gars	99	82.370	Amphilophus_citrinellus
ENSCHIG00000016912	GARS	100	86.526	ENSAOCG00000009108	gars	95	82.378	Amphiprion_ocellaris
ENSCHIG00000016912	GARS	83	82.745	ENSAOCG00000002479	gars	100	82.745	Amphiprion_ocellaris
ENSCHIG00000016912	GARS	100	86.039	ENSAPEG00000018850	gars	95	81.958	Amphiprion_percula
ENSCHIG00000016912	GARS	99	80.619	ENSAPEG00000018903	gars	99	78.571	Amphiprion_percula
ENSCHIG00000016912	GARS	100	87.338	ENSATEG00000008784	gars	99	87.561	Anabas_testudineus
ENSCHIG00000016912	GARS	67	91.325	ENSAPLG00000015638	-	100	91.164	Anas_platyrhynchos
ENSCHIG00000016912	GARS	100	89.935	ENSACAG00000005601	GARS	100	89.067	Anolis_carolinensis
ENSCHIG00000016912	GARS	100	95.779	ENSANAG00000022536	GARS	100	95.620	Aotus_nancymaae
ENSCHIG00000016912	GARS	100	87.013	ENSACLG00000027174	gars	94	84.091	Astatotilapia_calliptera
ENSCHIG00000016912	GARS	99	81.892	ENSACLG00000027158	gars	99	80.473	Astatotilapia_calliptera
ENSCHIG00000016912	GARS	97	86.432	ENSAMXG00000014895	gars	96	86.432	Astyanax_mexicanus
ENSCHIG00000016912	GARS	100	99.351	ENSBTAG00000018972	GARS	100	98.647	Bos_taurus
ENSCHIG00000016912	GARS	99	57.895	WBGene00001744	gars-1	99	58.271	Caenorhabditis_elegans
ENSCHIG00000016912	GARS	100	95.130	ENSCJAG00000008595	GARS	98	92.717	Callithrix_jacchus
ENSCHIG00000016912	GARS	99	95.908	ENSCAFG00000003086	GARS	98	90.191	Canis_familiaris
ENSCHIG00000016912	GARS	99	95.908	ENSCAFG00020004272	GARS	98	95.588	Canis_lupus_dingo
ENSCHIG00000016912	GARS	100	95.779	ENSTSYG00000008538	GARS	100	93.911	Carlito_syrichta
ENSCHIG00000016912	GARS	94	81.557	ENSCAPG00000007526	GARS	100	74.051	Cavia_aperea
ENSCHIG00000016912	GARS	100	95.130	ENSCPOG00000007547	GARS	96	91.822	Cavia_porcellus
ENSCHIG00000016912	GARS	100	95.292	ENSCCAG00000011512	GARS	100	92.558	Cebus_capucinus
ENSCHIG00000016912	GARS	100	95.942	ENSCATG00000036699	GARS	97	94.167	Cercocebus_atys
ENSCHIG00000016912	GARS	100	95.942	ENSCLAG00000007985	GARS	97	95.369	Chinchilla_lanigera
ENSCHIG00000016912	GARS	100	95.942	ENSCSAG00000014588	GARS	97	94.028	Chlorocebus_sabaeus
ENSCHIG00000016912	GARS	100	85.065	ENSCHOG00000003253	GARS	97	80.417	Choloepus_hoffmanni
ENSCHIG00000016912	GARS	100	91.396	ENSCPBG00000019482	GARS	96	86.752	Chrysemys_picta_bellii
ENSCHIG00000016912	GARS	98	64.415	ENSCING00000008937	-	100	63.609	Ciona_intestinalis
ENSCHIG00000016912	GARS	100	95.455	ENSCANG00000027727	GARS	97	93.472	Colobus_angolensis_palliatus
ENSCHIG00000016912	GARS	100	95.130	ENSCGRG00001020450	Gars	99	90.398	Cricetulus_griseus_chok1gshd
ENSCHIG00000016912	GARS	100	95.292	ENSCGRG00000008342	Gars	97	91.983	Cricetulus_griseus_crigri
ENSCHIG00000016912	GARS	100	87.500	ENSCSEG00000017671	gars	95	83.404	Cynoglossus_semilaevis
ENSCHIG00000016912	GARS	99	76.183	ENSCSEG00000017654	gars	98	75.296	Cynoglossus_semilaevis
ENSCHIG00000016912	GARS	100	87.500	ENSCVAG00000007149	gars	95	82.682	Cyprinodon_variegatus
ENSCHIG00000016912	GARS	100	88.149	ENSDARG00000059070	gars	99	86.589	Danio_rerio
ENSCHIG00000016912	GARS	100	95.779	ENSDNOG00000046478	GARS	100	95.448	Dasypus_novemcinctus
ENSCHIG00000016912	GARS	100	93.831	ENSDORG00000002672	Gars	96	92.888	Dipodomys_ordii
ENSCHIG00000016912	GARS	99	61.211	FBgn0027088	GlyRS	100	60.735	Drosophila_melanogaster
ENSCHIG00000016912	GARS	99	90.850	ENSETEG00000012196	GARS	97	90.750	Echinops_telfairi
ENSCHIG00000016912	GARS	67	80.000	ENSEBUG00000002254	gars	94	75.740	Eptatretus_burgeri
ENSCHIG00000016912	GARS	66	74.818	ENSEBUG00000002654	gars	90	71.800	Eptatretus_burgeri
ENSCHIG00000016912	GARS	100	96.104	ENSEASG00005000388	GARS	100	94.046	Equus_asinus_asinus
ENSCHIG00000016912	GARS	100	96.266	ENSECAG00000019373	GARS	100	94.181	Equus_caballus
ENSCHIG00000016912	GARS	100	87.013	ENSELUG00000003692	gars	95	82.591	Esox_lucius
ENSCHIG00000016912	GARS	100	96.104	ENSFCAG00000011415	GARS	93	93.139	Felis_catus
ENSCHIG00000016912	GARS	100	90.909	ENSFALG00000006550	GARS	100	90.909	Ficedula_albicollis
ENSCHIG00000016912	GARS	100	96.104	ENSFDAG00000014466	GARS	100	95.489	Fukomys_damarensis
ENSCHIG00000016912	GARS	100	87.500	ENSFHEG00000013189	gars	95	82.657	Fundulus_heteroclitus
ENSCHIG00000016912	GARS	93	77.565	ENSGMOG00000008856	-	100	76.603	Gadus_morhua
ENSCHIG00000016912	GARS	100	84.578	ENSGMOG00000010728	gars	95	81.153	Gadus_morhua
ENSCHIG00000016912	GARS	100	90.747	ENSGALG00000005694	GARS	100	89.781	Gallus_gallus
ENSCHIG00000016912	GARS	100	87.338	ENSGAFG00000005228	gars	92	84.604	Gambusia_affinis
ENSCHIG00000016912	GARS	100	85.714	ENSGACG00000003410	gars	95	81.818	Gasterosteus_aculeatus
ENSCHIG00000016912	GARS	100	92.045	ENSGAGG00000017755	GARS	99	92.058	Gopherus_agassizii
ENSCHIG00000016912	GARS	100	95.455	ENSGGOG00000004916	GARS	97	93.333	Gorilla_gorilla
ENSCHIG00000016912	GARS	99	81.729	ENSHBUG00000000815	gars	99	80.325	Haplochromis_burtoni
ENSCHIG00000016912	GARS	100	87.175	ENSHBUG00000016481	gars	94	84.233	Haplochromis_burtoni
ENSCHIG00000016912	GARS	100	96.266	ENSHGLG00000016342	GARS	97	94.313	Heterocephalus_glaber_female
ENSCHIG00000016912	GARS	100	95.455	ENSHGLG00100006787	GARS	99	94.350	Heterocephalus_glaber_male
ENSCHIG00000016912	GARS	100	83.442	ENSHCOG00000005261	gars	100	82.362	Hippocampus_comes
ENSCHIG00000016912	GARS	61	67.109	ENSHCOG00000005286	gars	96	67.109	Hippocampus_comes
ENSCHIG00000016912	GARS	100	79.545	ENSIPUG00000011443	gars	96	75.934	Ictalurus_punctatus
ENSCHIG00000016912	GARS	100	94.864	ENSSTOG00000015493	GARS	94	92.531	Ictidomys_tridecemlineatus
ENSCHIG00000016912	GARS	100	95.130	ENSJJAG00000022474	Gars	99	93.795	Jaculus_jaculus
ENSCHIG00000016912	GARS	100	88.312	ENSKMAG00000010428	gars	93	84.724	Kryptolebias_marmoratus
ENSCHIG00000016912	GARS	100	87.175	ENSLBEG00000019228	gars	94	83.807	Labrus_bergylta
ENSCHIG00000016912	GARS	99	82.353	ENSLBEG00000019179	gars	99	81.630	Labrus_bergylta
ENSCHIG00000016912	GARS	63	77.577	ENSLBEG00000013122	-	100	77.577	Labrus_bergylta
ENSCHIG00000016912	GARS	84	86.346	ENSLACG00000002810	GARS	100	86.346	Latimeria_chalumnae
ENSCHIG00000016912	GARS	100	87.662	ENSLOCG00000009688	gars	93	85.328	Lepisosteus_oculatus
ENSCHIG00000016912	GARS	100	95.942	ENSLAFG00000002496	GARS	100	94.372	Loxodonta_africana
ENSCHIG00000016912	GARS	100	95.942	ENSMFAG00000038863	GARS	97	94.167	Macaca_fascicularis
ENSCHIG00000016912	GARS	100	95.942	ENSMMUG00000004719	GARS	97	94.167	Macaca_mulatta
ENSCHIG00000016912	GARS	100	87.987	ENSMNEG00000043203	GARS	97	87.361	Macaca_nemestrina
ENSCHIG00000016912	GARS	100	95.779	ENSMLEG00000044430	GARS	97	94.028	Mandrillus_leucophaeus
ENSCHIG00000016912	GARS	100	86.688	ENSMAMG00000001894	gars	99	85.157	Mastacembelus_armatus
ENSCHIG00000016912	GARS	99	82.026	ENSMZEG00005019754	gars	99	80.593	Maylandia_zebra
ENSCHIG00000016912	GARS	100	87.175	ENSMZEG00005019740	gars	94	84.375	Maylandia_zebra
ENSCHIG00000016912	GARS	100	90.747	ENSMGAG00000003162	GARS	97	87.065	Meleagris_gallopavo
ENSCHIG00000016912	GARS	100	95.130	ENSMAUG00000016852	Gars	98	92.577	Mesocricetus_auratus
ENSCHIG00000016912	GARS	100	95.942	ENSMICG00000046006	GARS	100	95.766	Microcebus_murinus
ENSCHIG00000016912	GARS	100	96.104	ENSMOCG00000017680	Gars	95	95.369	Microtus_ochrogaster
ENSCHIG00000016912	GARS	100	83.199	ENSMMOG00000009695	gars	96	79.310	Mola_mola
ENSCHIG00000016912	GARS	56	82.749	ENSMODG00000021163	-	100	82.749	Monodelphis_domestica
ENSCHIG00000016912	GARS	100	86.364	ENSMALG00000006592	gars	87	83.239	Monopterus_albus
ENSCHIG00000016912	GARS	100	94.805	MGP_CAROLIEiJ_G0028410	Gars	99	90.897	Mus_caroli
ENSCHIG00000016912	GARS	100	94.805	ENSMUSG00000029777	Gars	96	92.493	Mus_musculus
ENSCHIG00000016912	GARS	100	94.481	MGP_PahariEiJ_G0022160	Gars	96	92.068	Mus_pahari
ENSCHIG00000016912	GARS	100	94.805	MGP_SPRETEiJ_G0029412	Gars	99	93.893	Mus_spretus
ENSCHIG00000016912	GARS	100	96.591	ENSMPUG00000005116	GARS	98	95.423	Mustela_putorius_furo
ENSCHIG00000016912	GARS	100	95.779	ENSMLUG00000002043	GARS	98	92.521	Myotis_lucifugus
ENSCHIG00000016912	GARS	100	95.130	ENSNGAG00000021844	Gars	98	92.211	Nannospalax_galili
ENSCHIG00000016912	GARS	63	78.663	ENSNBRG00000018643	gars	100	78.663	Neolamprologus_brichardi
ENSCHIG00000016912	GARS	100	87.500	ENSNBRG00000018585	gars	94	84.517	Neolamprologus_brichardi
ENSCHIG00000016912	GARS	100	95.779	ENSNLEG00000015152	GARS	97	93.889	Nomascus_leucogenys
ENSCHIG00000016912	GARS	99	82.764	ENSMEUG00000001741	GARS	100	83.434	Notamacropus_eugenii
ENSCHIG00000016912	GARS	85	95.758	ENSOPRG00000005342	GARS	84	94.388	Ochotona_princeps
ENSCHIG00000016912	GARS	100	95.169	ENSODEG00000008246	GARS	89	94.476	Octodon_degus
ENSCHIG00000016912	GARS	98	86.985	ENSOANG00000006262	GARS	97	82.048	Ornithorhynchus_anatinus
ENSCHIG00000016912	GARS	100	95.455	ENSOCUG00000005295	GARS	100	95.036	Oryctolagus_cuniculus
ENSCHIG00000016912	GARS	100	86.084	ENSORLG00000009470	gars	96	81.354	Oryzias_latipes
ENSCHIG00000016912	GARS	94	88.368	ENSORLG00020013036	gars	100	82.663	Oryzias_latipes_hni
ENSCHIG00000016912	GARS	100	87.013	ENSORLG00015012886	gars	96	82.133	Oryzias_latipes_hsok
ENSCHIG00000016912	GARS	64	75.381	ENSOMEG00000000133	gars	100	75.381	Oryzias_melastigma
ENSCHIG00000016912	GARS	100	95.292	ENSOGAG00000013321	GARS	100	93.234	Otolemur_garnettii
ENSCHIG00000016912	GARS	100	99.838	ENSOARG00000008017	GARS	100	99.594	Ovis_aries
ENSCHIG00000016912	GARS	100	95.455	ENSPPAG00000037266	GARS	98	93.472	Pan_paniscus
ENSCHIG00000016912	GARS	100	96.266	ENSPPRG00000001917	GARS	100	94.587	Panthera_pardus
ENSCHIG00000016912	GARS	100	96.266	ENSPTIG00000016096	GARS	100	95.766	Panthera_tigris_altaica
ENSCHIG00000016912	GARS	100	95.455	ENSPTRG00000019042	GARS	97	93.472	Pan_troglodytes
ENSCHIG00000016912	GARS	100	95.779	ENSPANG00000026231	GARS	97	94.028	Papio_anubis
ENSCHIG00000016912	GARS	99	86.992	ENSPKIG00000014863	gars	91	83.926	Paramormyrops_kingsleyae
ENSCHIG00000016912	GARS	100	92.208	ENSPSIG00000010935	GARS	99	92.208	Pelodiscus_sinensis
ENSCHIG00000016912	GARS	63	77.919	ENSPMGG00000023648	gars	99	78.173	Periophthalmus_magnuspinnatus
ENSCHIG00000016912	GARS	99	81.965	ENSPMGG00000023644	gars	94	79.469	Periophthalmus_magnuspinnatus
ENSCHIG00000016912	GARS	100	95.779	ENSPEMG00000019930	Gars	100	95.338	Peromyscus_maniculatus_bairdii
ENSCHIG00000016912	GARS	99	77.742	ENSPMAG00000006586	gars	100	76.657	Petromyzon_marinus
ENSCHIG00000016912	GARS	100	88.961	ENSPCIG00000017010	GARS	96	84.836	Phascolarctos_cinereus
ENSCHIG00000016912	GARS	100	87.338	ENSPFOG00000004593	gars	95	82.657	Poecilia_formosa
ENSCHIG00000016912	GARS	100	87.338	ENSPLAG00000008038	gars	92	84.604	Poecilia_latipinna
ENSCHIG00000016912	GARS	100	87.500	ENSPMEG00000005901	gars	95	82.797	Poecilia_mexicana
ENSCHIG00000016912	GARS	100	87.175	ENSPREG00000020960	gars	91	83.784	Poecilia_reticulata
ENSCHIG00000016912	GARS	100	94.643	ENSPPYG00000017673	GARS	97	93.056	Pongo_abelii
ENSCHIG00000016912	GARS	100	93.182	ENSPCAG00000007199	GARS	98	90.371	Procavia_capensis
ENSCHIG00000016912	GARS	100	91.558	ENSPCOG00000008887	GARS	100	90.392	Propithecus_coquereli
ENSCHIG00000016912	GARS	100	95.292	ENSPVAG00000013565	GARS	97	93.575	Pteropus_vampyrus
ENSCHIG00000016912	GARS	100	86.364	ENSPNYG00000005017	gars	94	83.523	Pundamilia_nyererei
ENSCHIG00000016912	GARS	99	82.219	ENSPNYG00000004960	gars	99	80.769	Pundamilia_nyererei
ENSCHIG00000016912	GARS	100	84.416	ENSPNAG00000020164	gars	96	80.111	Pygocentrus_nattereri
ENSCHIG00000016912	GARS	100	95.130	ENSRNOG00000011052	Gars	96	92.635	Rattus_norvegicus
ENSCHIG00000016912	GARS	99	93.333	ENSRBIG00000040287	GARS	97	90.556	Rhinopithecus_bieti
ENSCHIG00000016912	GARS	100	95.130	ENSRROG00000044600	GARS	97	92.639	Rhinopithecus_roxellana
ENSCHIG00000016912	GARS	96	48.649	YBR121C	GRS1	95	49.131	Saccharomyces_cerevisiae
ENSCHIG00000016912	GARS	95	49.573	YPR081C	-	95	49.576	Saccharomyces_cerevisiae
ENSCHIG00000016912	GARS	100	95.130	ENSSBOG00000022287	GARS	97	93.333	Saimiri_boliviensis_boliviensis
ENSCHIG00000016912	GARS	100	81.862	ENSSHAG00000003419	GARS	100	82.158	Sarcophilus_harrisii
ENSCHIG00000016912	GARS	100	86.039	ENSSFOG00015000573	gars	90	85.401	Scleropages_formosus
ENSCHIG00000016912	GARS	99	83.797	ENSSMAG00000013709	gars	99	82.641	Scophthalmus_maximus
ENSCHIG00000016912	GARS	100	87.500	ENSSMAG00000013672	gars	92	84.748	Scophthalmus_maximus
ENSCHIG00000016912	GARS	100	87.175	ENSSDUG00000016795	gars	95	82.937	Seriola_dumerili
ENSCHIG00000016912	GARS	99	71.824	ENSSDUG00000016758	gars	99	71.492	Seriola_dumerili
ENSCHIG00000016912	GARS	100	87.013	ENSSLDG00000014279	gars	95	82.657	Seriola_lalandi_dorsalis
ENSCHIG00000016912	GARS	99	83.007	ENSSLDG00000014238	gars	99	81.926	Seriola_lalandi_dorsalis
ENSCHIG00000016912	GARS	72	97.000	ENSSARG00000008410	GARS	71	97.000	Sorex_araneus
ENSCHIG00000016912	GARS	100	92.695	ENSSPUG00000001815	-	99	88.315	Sphenodon_punctatus
ENSCHIG00000016912	GARS	55	82.596	ENSSPAG00000011882	gars	94	82.891	Stegastes_partitus
ENSCHIG00000016912	GARS	100	81.169	ENSSPAG00000012003	gars	94	77.762	Stegastes_partitus
ENSCHIG00000016912	GARS	100	97.078	ENSSSCG00000016677	GARS	100	95.283	Sus_scrofa
ENSCHIG00000016912	GARS	100	88.406	ENSTGUG00000000364	GARS	100	88.507	Taeniopygia_guttata
ENSCHIG00000016912	GARS	100	86.851	ENSTRUG00000017557	gars	96	82.197	Takifugu_rubripes
ENSCHIG00000016912	GARS	100	86.201	ENSTNIG00000012738	gars	99	82.812	Tetraodon_nigroviridis
ENSCHIG00000016912	GARS	93	87.130	ENSTBEG00000008972	GARS	90	83.333	Tupaia_belangeri
ENSCHIG00000016912	GARS	99	96.236	ENSTTRG00000000334	GARS	99	96.084	Tursiops_truncatus
ENSCHIG00000016912	GARS	100	96.266	ENSUAMG00000016756	GARS	100	94.317	Ursus_americanus
ENSCHIG00000016912	GARS	100	96.429	ENSUMAG00000002158	GARS	100	96.429	Ursus_maritimus
ENSCHIG00000016912	GARS	100	87.825	ENSVPAG00000009438	GARS	99	88.211	Vicugna_pacos
ENSCHIG00000016912	GARS	99	95.908	ENSVVUG00000020981	GARS	89	94.978	Vulpes_vulpes
ENSCHIG00000016912	GARS	100	86.538	ENSXETG00000018474	gars	96	83.795	Xenopus_tropicalis
ENSCHIG00000016912	GARS	100	85.806	ENSXCOG00000010005	gars	95	81.363	Xiphophorus_couchianus
ENSCHIG00000016912	GARS	100	87.338	ENSXMAG00000009402	gars	93	82.657	Xiphophorus_maculatus