EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000016994 (Gene tree)
Gene ID: 102178710
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 26335 bases
Position: chrLWLT01000138.1:34672-61006
Accession: 102178710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000016985	RRM_1	PF00076.22	1.9e-25	1	1
ENSCHIP00000016976	RRM_1	PF00076.22	1.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024794	CSTF2-202	1721	XM_018044367	ENSCHIP00000016985	572 (aa)	XP_017899856	UPI00029D72C6
ENSCHIT00000024786	CSTF2-201	1781	XM_005700155	ENSCHIP00000016976	592 (aa)	XP_005700212	UPI00029D53C9

Gene Model

Click here to download ENSCHIG00000016994's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000016994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000016994	CSTF2	99	67.296	ENSCHIG00000016590	CSTF2T	99	67.925

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000016994	CSTF2	100	95.494	ENSG00000101811	CSTF2	100	95.494	Homo_sapiens
ENSCHIG00000016994	CSTF2	99	58.403	ENSAPOG00000005630	cstf2	97	60.307	Acanthochromis_polyacanthus
ENSCHIG00000016994	CSTF2	100	95.199	ENSAMEG00000002082	CSTF2	100	95.199	Ailuropoda_melanoleuca
ENSCHIG00000016994	CSTF2	84	82.645	ENSACIG00000012852	cstf2	96	58.651	Amphilophus_citrinellus
ENSCHIG00000016994	CSTF2	99	57.358	ENSAOCG00000020905	cstf2	97	60.307	Amphiprion_ocellaris
ENSCHIG00000016994	CSTF2	99	57.358	ENSAPEG00000006526	cstf2	97	60.307	Amphiprion_percula
ENSCHIG00000016994	CSTF2	84	80.247	ENSATEG00000018186	cstf2	96	58.966	Anabas_testudineus
ENSCHIG00000016994	CSTF2	97	78.082	ENSAPLG00000007255	CSTF2	98	77.797	Anas_platyrhynchos
ENSCHIG00000016994	CSTF2	100	94.807	ENSANAG00000022342	CSTF2	100	94.807	Aotus_nancymaae
ENSCHIG00000016994	CSTF2	65	82.645	ENSACLG00000000779	cstf2	93	61.313	Astatotilapia_calliptera
ENSCHIG00000016994	CSTF2	72	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSCHIG00000016994	CSTF2	100	99.662	ENSBTAG00000003547	CSTF2	100	99.662	Bos_taurus
ENSCHIG00000016994	CSTF2	100	95.439	ENSCJAG00000004422	CSTF2	100	95.623	Callithrix_jacchus
ENSCHIG00000016994	CSTF2	100	96.014	ENSCAFG00000017551	CSTF2	100	96.014	Canis_familiaris
ENSCHIG00000016994	CSTF2	100	95.812	ENSCAFG00020007619	CSTF2	100	95.812	Canis_lupus_dingo
ENSCHIG00000016994	CSTF2	100	95.946	ENSTSYG00000006529	CSTF2	100	95.946	Carlito_syrichta
ENSCHIG00000016994	CSTF2	100	93.068	ENSCPOG00000015255	CSTF2	100	93.068	Cavia_porcellus
ENSCHIG00000016994	CSTF2	100	95.439	ENSCCAG00000032975	CSTF2	100	95.439	Cebus_capucinus
ENSCHIG00000016994	CSTF2	100	96.154	ENSCATG00000022835	CSTF2	100	96.154	Cercocebus_atys
ENSCHIG00000016994	CSTF2	100	93.588	ENSCLAG00000001904	CSTF2	100	93.588	Chinchilla_lanigera
ENSCHIG00000016994	CSTF2	100	95.310	ENSCSAG00000010360	CSTF2	100	95.310	Chlorocebus_sabaeus
ENSCHIG00000016994	CSTF2	68	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSCHIG00000016994	CSTF2	100	75.441	ENSCPBG00000014293	CSTF2	100	75.199	Chrysemys_picta_bellii
ENSCHIG00000016994	CSTF2	100	96.329	ENSCANG00000030612	CSTF2	100	96.329	Colobus_angolensis_palliatus
ENSCHIG00000016994	CSTF2	100	90.172	ENSCGRG00001023023	Cstf2	100	90.172	Cricetulus_griseus_chok1gshd
ENSCHIG00000016994	CSTF2	100	87.478	ENSCGRG00000003897	Cstf2	100	87.478	Cricetulus_griseus_crigri
ENSCHIG00000016994	CSTF2	87	82.988	ENSCVAG00000005731	cstf2	96	61.257	Cyprinodon_variegatus
ENSCHIG00000016994	CSTF2	75	98.182	ENSDARG00000090788	cstf2	97	92.188	Danio_rerio
ENSCHIG00000016994	CSTF2	100	90.244	ENSDORG00000007195	Cstf2	100	90.244	Dipodomys_ordii
ENSCHIG00000016994	CSTF2	74	94.595	ENSETEG00000004931	CSTF2	68	94.595	Echinops_telfairi
ENSCHIG00000016994	CSTF2	100	95.980	ENSEASG00005001216	CSTF2	100	95.980	Equus_asinus_asinus
ENSCHIG00000016994	CSTF2	100	96.187	ENSECAG00000009325	CSTF2	100	96.187	Equus_caballus
ENSCHIG00000016994	CSTF2	100	97.054	ENSFCAG00000007000	CSTF2	100	97.054	Felis_catus
ENSCHIG00000016994	CSTF2	92	76.814	ENSFALG00000003859	CSTF2	100	77.168	Ficedula_albicollis
ENSCHIG00000016994	CSTF2	100	93.934	ENSFDAG00000002416	CSTF2	100	93.934	Fukomys_damarensis
ENSCHIG00000016994	CSTF2	87	81.328	ENSFHEG00000017065	cstf2	93	61.005	Fundulus_heteroclitus
ENSCHIG00000016994	CSTF2	99	53.188	ENSGMOG00000005145	cstf2	99	57.812	Gadus_morhua
ENSCHIG00000016994	CSTF2	100	78.830	ENSGALG00000006760	CSTF2	100	79.174	Gallus_gallus
ENSCHIG00000016994	CSTF2	99	56.110	ENSGACG00000017326	cstf2	93	81.633	Gasterosteus_aculeatus
ENSCHIG00000016994	CSTF2	100	77.430	ENSGAGG00000006037	CSTF2	100	78.418	Gopherus_agassizii
ENSCHIG00000016994	CSTF2	100	96.329	ENSGGOG00000022267	CSTF2	100	96.329	Gorilla_gorilla
ENSCHIG00000016994	CSTF2	65	81.707	ENSHBUG00000016183	cstf2	93	61.168	Haplochromis_burtoni
ENSCHIG00000016994	CSTF2	100	79.895	ENSHGLG00000013455	-	100	79.895	Heterocephalus_glaber_female
ENSCHIG00000016994	CSTF2	100	93.761	ENSHGLG00000000659	-	100	93.761	Heterocephalus_glaber_female
ENSCHIG00000016994	CSTF2	100	93.761	ENSHGLG00100001130	-	100	93.761	Heterocephalus_glaber_male
ENSCHIG00000016994	CSTF2	100	80.070	ENSHGLG00100015391	-	100	80.070	Heterocephalus_glaber_male
ENSCHIG00000016994	CSTF2	84	81.557	ENSHCOG00000005157	cstf2	97	60.449	Hippocampus_comes
ENSCHIG00000016994	CSTF2	73	69.575	ENSIPUG00000017839	cstf2	99	60.496	Ictalurus_punctatus
ENSCHIG00000016994	CSTF2	100	93.588	ENSSTOG00000023445	CSTF2	100	93.588	Ictidomys_tridecemlineatus
ENSCHIG00000016994	CSTF2	100	92.028	ENSJJAG00000020507	Cstf2	100	92.028	Jaculus_jaculus
ENSCHIG00000016994	CSTF2	84	80.000	ENSKMAG00000001068	cstf2	96	59.965	Kryptolebias_marmoratus
ENSCHIG00000016994	CSTF2	53	94.915	ENSLBEG00000028720	cstf2	82	94.915	Labrus_bergylta
ENSCHIG00000016994	CSTF2	99	68.369	ENSLACG00000015927	CSTF2	99	68.369	Latimeria_chalumnae
ENSCHIG00000016994	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	65.517	Lepisosteus_oculatus
ENSCHIG00000016994	CSTF2	100	92.374	ENSLAFG00000000474	CSTF2	100	92.374	Loxodonta_africana
ENSCHIG00000016994	CSTF2	100	96.329	ENSMFAG00000043888	CSTF2	100	96.329	Macaca_fascicularis
ENSCHIG00000016994	CSTF2	100	96.115	ENSMMUG00000013008	CSTF2	100	96.115	Macaca_mulatta
ENSCHIG00000016994	CSTF2	100	96.115	ENSMNEG00000041824	CSTF2	100	96.115	Macaca_nemestrina
ENSCHIG00000016994	CSTF2	100	96.329	ENSMLEG00000036870	CSTF2	100	96.329	Mandrillus_leucophaeus
ENSCHIG00000016994	CSTF2	82	79.828	ENSMAMG00000020364	cstf2	96	59.155	Mastacembelus_armatus
ENSCHIG00000016994	CSTF2	65	82.645	ENSMZEG00005007200	cstf2	96	61.313	Maylandia_zebra
ENSCHIG00000016994	CSTF2	93	68.456	ENSMGAG00000004139	CSTF2	100	82.072	Meleagris_gallopavo
ENSCHIG00000016994	CSTF2	100	90.345	ENSMAUG00000000965	Cstf2	100	90.345	Mesocricetus_auratus
ENSCHIG00000016994	CSTF2	100	94.056	ENSMICG00000014121	CSTF2	100	94.056	Microcebus_murinus
ENSCHIG00000016994	CSTF2	100	90.957	ENSMOCG00000008081	Cstf2	100	90.957	Microtus_ochrogaster
ENSCHIG00000016994	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	96	54.688	Mola_mola
ENSCHIG00000016994	CSTF2	100	80.399	ENSMODG00000011785	CSTF2	100	82.529	Monodelphis_domestica
ENSCHIG00000016994	CSTF2	100	90.345	MGP_CAROLIEiJ_G0033383	Cstf2	100	90.345	Mus_caroli
ENSCHIG00000016994	CSTF2	100	90.345	ENSMUSG00000031256	Cstf2	100	90.345	Mus_musculus
ENSCHIG00000016994	CSTF2	100	90.328	MGP_PahariEiJ_G0031923	Cstf2	100	90.501	Mus_pahari
ENSCHIG00000016994	CSTF2	100	90.345	MGP_SPRETEiJ_G0034548	Cstf2	100	90.345	Mus_spretus
ENSCHIG00000016994	CSTF2	100	90.794	ENSMPUG00000002339	CSTF2	100	90.794	Mustela_putorius_furo
ENSCHIG00000016994	CSTF2	100	88.871	ENSMLUG00000004598	CSTF2	98	88.871	Myotis_lucifugus
ENSCHIG00000016994	CSTF2	100	91.883	ENSNGAG00000021985	Cstf2	100	92.055	Nannospalax_galili
ENSCHIG00000016994	CSTF2	96	52.941	ENSNBRG00000021694	cstf2	100	57.016	Neolamprologus_brichardi
ENSCHIG00000016994	CSTF2	100	96.329	ENSNLEG00000007510	CSTF2	100	96.329	Nomascus_leucogenys
ENSCHIG00000016994	CSTF2	100	78.497	ENSMEUG00000007875	-	100	79.545	Notamacropus_eugenii
ENSCHIG00000016994	CSTF2	91	79.846	ENSMEUG00000014025	-	100	81.574	Notamacropus_eugenii
ENSCHIG00000016994	CSTF2	100	82.168	ENSMEUG00000011186	-	100	84.091	Notamacropus_eugenii
ENSCHIG00000016994	CSTF2	87	80.543	ENSOPRG00000003106	CSTF2	89	80.769	Ochotona_princeps
ENSCHIG00000016994	CSTF2	100	92.894	ENSODEG00000002059	CSTF2	100	92.894	Octodon_degus
ENSCHIG00000016994	CSTF2	99	55.730	ENSONIG00000002631	cstf2	99	58.059	Oreochromis_niloticus
ENSCHIG00000016994	CSTF2	84	76.971	ENSOANG00000004208	CSTF2	76	82.158	Ornithorhynchus_anatinus
ENSCHIG00000016994	CSTF2	100	92.721	ENSOCUG00000010468	CSTF2	100	92.721	Oryctolagus_cuniculus
ENSCHIG00000016994	CSTF2	83	80.498	ENSORLG00000001380	cstf2	97	59.208	Oryzias_latipes
ENSCHIG00000016994	CSTF2	83	80.498	ENSORLG00020021917	cstf2	97	59.208	Oryzias_latipes_hni
ENSCHIG00000016994	CSTF2	83	80.498	ENSORLG00015011996	cstf2	97	59.208	Oryzias_latipes_hsok
ENSCHIG00000016994	CSTF2	83	80.498	ENSOMEG00000015507	cstf2	97	60.069	Oryzias_melastigma
ENSCHIG00000016994	CSTF2	100	89.189	ENSOGAG00000011192	CSTF2	100	89.189	Otolemur_garnettii
ENSCHIG00000016994	CSTF2	100	100.000	ENSOARG00000001022	CSTF2	100	100.000	Ovis_aries
ENSCHIG00000016994	CSTF2	100	96.329	ENSPPAG00000031804	CSTF2	100	96.329	Pan_paniscus
ENSCHIG00000016994	CSTF2	100	97.054	ENSPPRG00000022492	CSTF2	100	97.054	Panthera_pardus
ENSCHIG00000016994	CSTF2	100	96.707	ENSPTIG00000009922	CSTF2	100	96.707	Panthera_tigris_altaica
ENSCHIG00000016994	CSTF2	100	96.329	ENSPTRG00000022090	CSTF2	100	96.329	Pan_troglodytes
ENSCHIG00000016994	CSTF2	100	96.329	ENSPANG00000002303	CSTF2	100	96.329	Papio_anubis
ENSCHIG00000016994	CSTF2	99	62.653	ENSPKIG00000005033	cstf2	97	61.471	Paramormyrops_kingsleyae
ENSCHIG00000016994	CSTF2	84	81.328	ENSPMGG00000006534	cstf2	97	59.794	Periophthalmus_magnuspinnatus
ENSCHIG00000016994	CSTF2	100	89.483	ENSPEMG00000019415	Cstf2	100	89.483	Peromyscus_maniculatus_bairdii
ENSCHIG00000016994	CSTF2	100	81.457	ENSPCIG00000002989	CSTF2	100	82.285	Phascolarctos_cinereus
ENSCHIG00000016994	CSTF2	84	82.158	ENSPMEG00000017743	cstf2	96	57.601	Poecilia_mexicana
ENSCHIG00000016994	CSTF2	59	70.149	ENSPREG00000011481	cstf2	97	60.554	Poecilia_reticulata
ENSCHIG00000016994	CSTF2	100	95.477	ENSPPYG00000020541	CSTF2	100	95.477	Pongo_abelii
ENSCHIG00000016994	CSTF2	100	94.580	ENSPCOG00000027744	CSTF2	100	94.580	Propithecus_coquereli
ENSCHIG00000016994	CSTF2	97	81.149	ENSPVAG00000008342	CSTF2	100	81.149	Pteropus_vampyrus
ENSCHIG00000016994	CSTF2	99	61.565	ENSPNAG00000018887	cstf2	97	61.913	Pygocentrus_nattereri
ENSCHIG00000016994	CSTF2	100	91.130	ENSRNOG00000048025	Cstf2	100	91.130	Rattus_norvegicus
ENSCHIG00000016994	CSTF2	100	94.755	ENSRBIG00000030745	CSTF2	100	94.755	Rhinopithecus_bieti
ENSCHIG00000016994	CSTF2	100	96.329	ENSRROG00000045042	CSTF2	100	96.329	Rhinopithecus_roxellana
ENSCHIG00000016994	CSTF2	100	95.439	ENSSBOG00000021649	CSTF2	100	95.439	Saimiri_boliviensis_boliviensis
ENSCHIG00000016994	CSTF2	95	100.000	ENSSHAG00000003681	CSTF2	92	83.333	Sarcophilus_harrisii
ENSCHIG00000016994	CSTF2	99	63.511	ENSSFOG00015006348	cstf2	98	63.394	Scleropages_formosus
ENSCHIG00000016994	CSTF2	86	82.988	ENSSMAG00000013463	cstf2	96	60.312	Scophthalmus_maximus
ENSCHIG00000016994	CSTF2	100	63.393	ENSSPUG00000005288	-	97	79.237	Sphenodon_punctatus
ENSCHIG00000016994	CSTF2	100	97.203	ENSSSCG00000012486	CSTF2	100	98.653	Sus_scrofa
ENSCHIG00000016994	CSTF2	100	79.082	ENSTGUG00000002253	CSTF2	100	79.422	Taeniopygia_guttata
ENSCHIG00000016994	CSTF2	99	60.241	ENSTNIG00000016860	cstf2	99	60.788	Tetraodon_nigroviridis
ENSCHIG00000016994	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSCHIG00000016994	CSTF2	100	98.094	ENSTTRG00000013556	CSTF2	100	98.094	Tursiops_truncatus
ENSCHIG00000016994	CSTF2	100	95.876	ENSUAMG00000026605	CSTF2	100	95.876	Ursus_americanus
ENSCHIG00000016994	CSTF2	100	90.210	ENSUMAG00000012417	CSTF2	100	98.582	Ursus_maritimus
ENSCHIG00000016994	CSTF2	73	97.959	ENSVPAG00000006466	CSTF2	72	97.959	Vicugna_pacos
ENSCHIG00000016994	CSTF2	100	96.187	ENSVVUG00000004717	CSTF2	100	96.187	Vulpes_vulpes
ENSCHIG00000016994	CSTF2	83	87.143	ENSXETG00000009642	cstf2	87	87.143	Xenopus_tropicalis
ENSCHIG00000016994	CSTF2	79	85.238	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus