EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000017066 (Gene tree)
Gene ID: 102179684
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 28441 bases
Position: chr14:16111092-16139532
Accession: 102179684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000017094	POP1	PF06978.11	1.9e-39	1	2
ENSCHIP00000017094	POP1	PF06978.11	1.9e-39	2	2
ENSCHIP00000017094	POPLD	PF08170.12	3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024903	POP1-201	3051	XM_018058275	ENSCHIP00000017094	1016 (aa)	XP_017913764	UPI000D1906C4

Gene Model

Click here to download ENSCHIG00000017066's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG
chx03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017066	POP1	100	80.878	ENSG00000104356	POP1	100	88.525	Homo_sapiens
ENSCHIG00000017066	POP1	100	47.855	ENSAPOG00000008198	pop1	100	47.259	Acanthochromis_polyacanthus
ENSCHIG00000017066	POP1	100	79.883	ENSAMEG00000000556	POP1	100	79.883	Ailuropoda_melanoleuca
ENSCHIG00000017066	POP1	100	47.449	ENSACIG00000004169	POP1	100	46.731	Amphilophus_citrinellus
ENSCHIG00000017066	POP1	100	47.669	ENSAOCG00000010991	pop1	100	48.095	Amphiprion_ocellaris
ENSCHIG00000017066	POP1	91	47.242	ENSAPEG00000007607	pop1	96	48.333	Amphiprion_percula
ENSCHIG00000017066	POP1	100	46.553	ENSATEG00000024814	POP1	100	46.459	Anabas_testudineus
ENSCHIG00000017066	POP1	92	61.012	ENSAPLG00000014418	POP1	100	61.012	Anas_platyrhynchos
ENSCHIG00000017066	POP1	100	55.877	ENSACAG00000016083	POP1	100	55.129	Anolis_carolinensis
ENSCHIG00000017066	POP1	88	86.607	ENSANAG00000026360	POP1	99	86.607	Aotus_nancymaae
ENSCHIG00000017066	POP1	100	47.259	ENSACLG00000010951	pop1	100	46.964	Astatotilapia_calliptera
ENSCHIG00000017066	POP1	100	46.518	ENSAMXG00000014483	POP1	100	46.611	Astyanax_mexicanus
ENSCHIG00000017066	POP1	100	96.063	ENSBTAG00000012596	POP1	100	96.063	Bos_taurus
ENSCHIG00000017066	POP1	100	79.004	ENSCJAG00000015567	POP1	100	79.199	Callithrix_jacchus
ENSCHIG00000017066	POP1	100	79.568	ENSCAFG00000000469	POP1	100	79.470	Canis_familiaris
ENSCHIG00000017066	POP1	100	80.354	ENSCAFG00020026765	POP1	100	80.354	Canis_lupus_dingo
ENSCHIG00000017066	POP1	100	79.610	ENSTSYG00000003097	POP1	100	79.610	Carlito_syrichta
ENSCHIG00000017066	POP1	100	74.247	ENSCAPG00000007251	POP1	100	74.052	Cavia_aperea
ENSCHIG00000017066	POP1	100	76.585	ENSCPOG00000002901	POP1	100	76.390	Cavia_porcellus
ENSCHIG00000017066	POP1	100	79.297	ENSCCAG00000018939	POP1	94	87.247	Cebus_capucinus
ENSCHIG00000017066	POP1	100	81.073	ENSCATG00000040916	POP1	100	81.073	Cercocebus_atys
ENSCHIG00000017066	POP1	100	77.756	ENSCLAG00000007208	POP1	97	77.561	Chinchilla_lanigera
ENSCHIG00000017066	POP1	90	80.823	ENSCSAG00000012340	POP1	99	80.932	Chlorocebus_sabaeus
ENSCHIG00000017066	POP1	95	74.641	ENSCHOG00000011432	POP1	99	74.641	Choloepus_hoffmanni
ENSCHIG00000017066	POP1	100	64.481	ENSCPBG00000006373	POP1	100	64.390	Chrysemys_picta_bellii
ENSCHIG00000017066	POP1	82	39.689	ENSCING00000008323	-	75	39.689	Ciona_intestinalis
ENSCHIG00000017066	POP1	100	80.976	ENSCANG00000001647	POP1	100	80.976	Colobus_angolensis_palliatus
ENSCHIG00000017066	POP1	100	73.171	ENSCGRG00001017308	Pop1	100	73.021	Cricetulus_griseus_chok1gshd
ENSCHIG00000017066	POP1	100	68.000	ENSCGRG00000010824	Pop1	100	67.840	Cricetulus_griseus_crigri
ENSCHIG00000017066	POP1	100	45.290	ENSCSEG00000008737	POP1	100	45.774	Cynoglossus_semilaevis
ENSCHIG00000017066	POP1	100	48.141	ENSCVAG00000022248	pop1	94	52.517	Cyprinodon_variegatus
ENSCHIG00000017066	POP1	100	74.004	ENSDNOG00000019974	POP1	100	74.004	Dasypus_novemcinctus
ENSCHIG00000017066	POP1	100	69.268	ENSDORG00000015384	Pop1	100	68.939	Dipodomys_ordii
ENSCHIG00000017066	POP1	61	34.810	FBgn0026702	l(1)G0045	70	34.477	Drosophila_melanogaster
ENSCHIG00000017066	POP1	89	70.403	ENSETEG00000007839	POP1	88	70.403	Echinops_telfairi
ENSCHIG00000017066	POP1	100	82.711	ENSEASG00005003189	POP1	98	82.711	Equus_asinus_asinus
ENSCHIG00000017066	POP1	100	82.122	ENSECAG00000024236	POP1	100	82.122	Equus_caballus
ENSCHIG00000017066	POP1	67	83.333	ENSEEUG00000003050	-	70	83.333	Erinaceus_europaeus
ENSCHIG00000017066	POP1	100	48.552	ENSELUG00000003526	pop1	94	52.362	Esox_lucius
ENSCHIG00000017066	POP1	100	82.318	ENSFCAG00000002168	POP1	100	82.318	Felis_catus
ENSCHIG00000017066	POP1	100	57.517	ENSFALG00000005711	POP1	100	56.759	Ficedula_albicollis
ENSCHIG00000017066	POP1	100	77.290	ENSFDAG00000017068	POP1	100	77.290	Fukomys_damarensis
ENSCHIG00000017066	POP1	94	51.370	ENSFHEG00000019518	pop1	94	51.370	Fundulus_heteroclitus
ENSCHIG00000017066	POP1	92	46.791	ENSGMOG00000000659	POP1	97	46.998	Gadus_morhua
ENSCHIG00000017066	POP1	100	48.309	ENSGAFG00000019770	POP1	94	52.126	Gambusia_affinis
ENSCHIG00000017066	POP1	100	46.558	ENSGACG00000003499	pop1	100	46.367	Gasterosteus_aculeatus
ENSCHIG00000017066	POP1	100	63.681	ENSGAGG00000011737	POP1	98	63.681	Gopherus_agassizii
ENSCHIG00000017066	POP1	100	80.878	ENSGGOG00000003176	POP1	100	80.878	Gorilla_gorilla
ENSCHIG00000017066	POP1	100	47.448	ENSHBUG00000021583	pop1	95	52.846	Haplochromis_burtoni
ENSCHIG00000017066	POP1	100	77.268	ENSHGLG00000006029	POP1	100	77.171	Heterocephalus_glaber_female
ENSCHIG00000017066	POP1	100	77.268	ENSHGLG00100016879	POP1	100	77.171	Heterocephalus_glaber_male
ENSCHIG00000017066	POP1	90	49.893	ENSHCOG00000013888	pop1	96	49.205	Hippocampus_comes
ENSCHIG00000017066	POP1	100	45.872	ENSIPUG00000018336	pop1	91	63.415	Ictalurus_punctatus
ENSCHIG00000017066	POP1	100	77.973	ENSSTOG00000011455	POP1	97	77.691	Ictidomys_tridecemlineatus
ENSCHIG00000017066	POP1	100	72.790	ENSJJAG00000013325	Pop1	100	72.211	Jaculus_jaculus
ENSCHIG00000017066	POP1	100	47.353	ENSKMAG00000001346	POP1	100	47.546	Kryptolebias_marmoratus
ENSCHIG00000017066	POP1	81	55.246	ENSLBEG00000024457	POP1	89	54.777	Labrus_bergylta
ENSCHIG00000017066	POP1	93	55.207	ENSLACG00000012498	POP1	100	54.317	Latimeria_chalumnae
ENSCHIG00000017066	POP1	100	51.203	ENSLOCG00000009817	POP1	100	51.252	Lepisosteus_oculatus
ENSCHIG00000017066	POP1	100	79.475	ENSLAFG00000010770	POP1	100	79.669	Loxodonta_africana
ENSCHIG00000017066	POP1	100	80.976	ENSMFAG00000000347	POP1	100	80.976	Macaca_fascicularis
ENSCHIG00000017066	POP1	100	80.976	ENSMNEG00000036870	POP1	100	80.976	Macaca_nemestrina
ENSCHIG00000017066	POP1	100	80.780	ENSMLEG00000034986	POP1	100	80.780	Mandrillus_leucophaeus
ENSCHIG00000017066	POP1	100	47.588	ENSMAMG00000004040	pop1	100	47.338	Mastacembelus_armatus
ENSCHIG00000017066	POP1	100	47.448	ENSMZEG00005025448	pop1	100	46.964	Maylandia_zebra
ENSCHIG00000017066	POP1	100	56.522	ENSMGAG00000012167	POP1	100	56.714	Meleagris_gallopavo
ENSCHIG00000017066	POP1	100	73.190	ENSMAUG00000017537	Pop1	100	72.896	Mesocricetus_auratus
ENSCHIG00000017066	POP1	100	79.590	ENSMICG00000004361	POP1	100	79.688	Microcebus_murinus
ENSCHIG00000017066	POP1	100	72.141	ENSMOCG00000006356	Pop1	100	72.727	Microtus_ochrogaster
ENSCHIG00000017066	POP1	100	44.058	ENSMMOG00000018242	pop1	95	47.172	Mola_mola
ENSCHIG00000017066	POP1	100	67.892	ENSMODG00000006561	POP1	100	67.636	Monodelphis_domestica
ENSCHIG00000017066	POP1	100	47.847	ENSMALG00000012621	POP1	100	48.038	Monopterus_albus
ENSCHIG00000017066	POP1	100	72.603	MGP_CAROLIEiJ_G0019726	Pop1	100	72.407	Mus_caroli
ENSCHIG00000017066	POP1	100	72.407	ENSMUSG00000022325	Pop1	100	72.282	Mus_musculus
ENSCHIG00000017066	POP1	100	72.825	MGP_PahariEiJ_G0019735	Pop1	100	72.488	Mus_pahari
ENSCHIG00000017066	POP1	100	72.211	MGP_SPRETEiJ_G0020622	Pop1	100	72.086	Mus_spretus
ENSCHIG00000017066	POP1	100	80.607	ENSMPUG00000015250	POP1	100	80.607	Mustela_putorius_furo
ENSCHIG00000017066	POP1	100	77.843	ENSMLUG00000010204	POP1	100	77.353	Myotis_lucifugus
ENSCHIG00000017066	POP1	100	76.465	ENSNGAG00000001582	Pop1	100	76.465	Nannospalax_galili
ENSCHIG00000017066	POP1	89	48.332	ENSNBRG00000002356	pop1	89	54.911	Neolamprologus_brichardi
ENSCHIG00000017066	POP1	100	80.390	ENSNLEG00000002541	POP1	100	80.390	Nomascus_leucogenys
ENSCHIG00000017066	POP1	87	71.714	ENSMEUG00000003118	POP1	92	71.714	Notamacropus_eugenii
ENSCHIG00000017066	POP1	100	74.537	ENSOPRG00000007667	POP1	100	74.634	Ochotona_princeps
ENSCHIG00000017066	POP1	100	76.316	ENSODEG00000003984	POP1	100	76.218	Octodon_degus
ENSCHIG00000017066	POP1	100	48.560	ENSONIG00000016445	pop1	100	47.751	Oreochromis_niloticus
ENSCHIG00000017066	POP1	59	72.561	ENSOANG00000001278	-	94	73.780	Ornithorhynchus_anatinus
ENSCHIG00000017066	POP1	100	77.573	ENSOCUG00000017400	POP1	100	76.990	Oryctolagus_cuniculus
ENSCHIG00000017066	POP1	99	47.712	ENSORLG00000002839	pop1	100	47.363	Oryzias_latipes
ENSCHIG00000017066	POP1	90	48.783	ENSORLG00020022450	POP1	96	48.456	Oryzias_latipes_hni
ENSCHIG00000017066	POP1	100	47.780	ENSORLG00015012746	POP1	100	47.688	Oryzias_latipes_hsok
ENSCHIG00000017066	POP1	100	47.852	ENSOMEG00000006915	pop1	99	47.656	Oryzias_melastigma
ENSCHIG00000017066	POP1	100	77.366	ENSOGAG00000001466	POP1	100	77.268	Otolemur_garnettii
ENSCHIG00000017066	POP1	100	80.878	ENSPPAG00000018410	POP1	100	81.073	Pan_paniscus
ENSCHIG00000017066	POP1	100	82.122	ENSPPRG00000005002	POP1	100	82.122	Panthera_pardus
ENSCHIG00000017066	POP1	100	82.515	ENSPTIG00000016527	POP1	100	82.515	Panthera_tigris_altaica
ENSCHIG00000017066	POP1	100	80.878	ENSPTRG00000020458	POP1	100	81.073	Pan_troglodytes
ENSCHIG00000017066	POP1	100	80.585	ENSPANG00000009704	POP1	100	80.585	Papio_anubis
ENSCHIG00000017066	POP1	100	62.768	ENSPSIG00000012343	POP1	100	62.585	Pelodiscus_sinensis
ENSCHIG00000017066	POP1	90	49.511	ENSPMGG00000022253	POP1	95	49.520	Periophthalmus_magnuspinnatus
ENSCHIG00000017066	POP1	99	72.233	ENSPEMG00000023633	Pop1	100	71.947	Peromyscus_maniculatus_bairdii
ENSCHIG00000017066	POP1	90	44.397	ENSPMAG00000003209	POP1	100	44.468	Petromyzon_marinus
ENSCHIG00000017066	POP1	100	67.311	ENSPCIG00000012216	POP1	100	67.150	Phascolarctos_cinereus
ENSCHIG00000017066	POP1	100	48.750	ENSPFOG00000012490	POP1	94	52.582	Poecilia_formosa
ENSCHIG00000017066	POP1	100	48.558	ENSPLAG00000004646	POP1	94	52.446	Poecilia_latipinna
ENSCHIG00000017066	POP1	100	48.701	ENSPMEG00000019592	POP1	94	52.725	Poecilia_mexicana
ENSCHIG00000017066	POP1	100	48.797	ENSPREG00000020951	POP1	100	48.259	Poecilia_reticulata
ENSCHIG00000017066	POP1	100	80.976	ENSPPYG00000018777	POP1	100	80.976	Pongo_abelii
ENSCHIG00000017066	POP1	100	73.294	ENSPCAG00000016662	POP1	100	72.612	Procavia_capensis
ENSCHIG00000017066	POP1	100	80.469	ENSPCOG00000019420	POP1	100	80.371	Propithecus_coquereli
ENSCHIG00000017066	POP1	100	81.256	ENSPVAG00000014468	POP1	100	81.256	Pteropus_vampyrus
ENSCHIG00000017066	POP1	89	48.599	ENSPNYG00000004476	pop1	90	55.556	Pundamilia_nyererei
ENSCHIG00000017066	POP1	100	44.055	ENSPNAG00000000265	pop1	100	43.566	Pygocentrus_nattereri
ENSCHIG00000017066	POP1	100	73.314	ENSRNOG00000005243	Pop1	100	73.314	Rattus_norvegicus
ENSCHIG00000017066	POP1	100	80.976	ENSRBIG00000007996	POP1	100	80.976	Rhinopithecus_bieti
ENSCHIG00000017066	POP1	100	81.073	ENSRROG00000012334	POP1	100	81.073	Rhinopithecus_roxellana
ENSCHIG00000017066	POP1	99	79.961	ENSSBOG00000020830	POP1	100	79.566	Saimiri_boliviensis_boliviensis
ENSCHIG00000017066	POP1	100	67.410	ENSSHAG00000000296	POP1	100	67.119	Sarcophilus_harrisii
ENSCHIG00000017066	POP1	100	49.038	ENSSFOG00015007429	pop1	99	48.795	Scleropages_formosus
ENSCHIG00000017066	POP1	86	53.544	ENSSMAG00000010467	POP1	94	54.148	Scophthalmus_maximus
ENSCHIG00000017066	POP1	100	46.849	ENSSDUG00000007817	POP1	100	47.037	Seriola_dumerili
ENSCHIG00000017066	POP1	100	46.898	ENSSLDG00000012565	POP1	100	46.837	Seriola_lalandi_dorsalis
ENSCHIG00000017066	POP1	100	58.511	ENSSPUG00000003550	-	100	58.869	Sphenodon_punctatus
ENSCHIG00000017066	POP1	90	49.837	ENSSPAG00000014955	pop1	87	56.501	Stegastes_partitus
ENSCHIG00000017066	POP1	100	84.366	ENSSSCG00000006078	POP1	100	84.366	Sus_scrofa
ENSCHIG00000017066	POP1	92	53.583	ENSTGUG00000012011	-	100	53.271	Taeniopygia_guttata
ENSCHIG00000017066	POP1	91	47.674	ENSTRUG00000010856	pop1	89	51.869	Takifugu_rubripes
ENSCHIG00000017066	POP1	92	48.279	ENSTNIG00000013297	pop1	99	48.021	Tetraodon_nigroviridis
ENSCHIG00000017066	POP1	95	75.537	ENSTBEG00000014214	POP1	99	75.435	Tupaia_belangeri
ENSCHIG00000017066	POP1	100	84.759	ENSTTRG00000016071	POP1	100	84.759	Tursiops_truncatus
ENSCHIG00000017066	POP1	99	79.005	ENSUAMG00000017309	POP1	100	79.005	Ursus_americanus
ENSCHIG00000017066	POP1	100	80.428	ENSUMAG00000016952	POP1	100	87.045	Ursus_maritimus
ENSCHIG00000017066	POP1	82	91.209	ENSVPAG00000008278	POP1	81	91.209	Vicugna_pacos
ENSCHIG00000017066	POP1	100	80.550	ENSVVUG00000010994	POP1	100	80.550	Vulpes_vulpes
ENSCHIG00000017066	POP1	100	44.081	ENSXCOG00000017043	POP1	94	46.185	Xiphophorus_couchianus
ENSCHIG00000017066	POP1	100	47.872	ENSXMAG00000002472	POP1	100	47.133	Xiphophorus_maculatus