EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000017074 (Gene tree)
Gene ID: 102178891
Gene Symbol: TRMU
Alias: FLJ10140|MTO2|TRMT
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 16693 bases
Position: chr5:115569455-115586147
Accession: 102178891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000017117	tRNA_Me_trans	PF03054.16	1.4e-142	1	1
ENSCHIP00000017110	tRNA_Me_trans	PF03054.16	1.5e-142	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024919	TRMU-201	1266	-	ENSCHIP00000017110	421 (aa)	-	UPI000D18FD02
ENSCHIT00000024926	TRMU-202	1491	XM_018048915	ENSCHIP00000017117	417 (aa)	XP_017904404	UPI0008479724

Gene Model

Click here to download ENSCHIG00000017074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017074's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017074	TRMU	100	90.736	ENSG00000100416	TRMU	100	92.857	Homo_sapiens
ENSCHIG00000017074	TRMU	100	68.825	ENSAPOG00000014458	trmu	100	68.825	Acanthochromis_polyacanthus
ENSCHIG00000017074	TRMU	99	91.587	ENSAMEG00000003319	TRMU	99	91.990	Ailuropoda_melanoleuca
ENSCHIG00000017074	TRMU	98	68.537	ENSACIG00000002101	trmu	99	68.537	Amphilophus_citrinellus
ENSCHIG00000017074	TRMU	100	69.065	ENSAOCG00000013155	trmu	100	69.065	Amphiprion_ocellaris
ENSCHIG00000017074	TRMU	100	68.585	ENSAPEG00000013350	trmu	100	68.585	Amphiprion_percula
ENSCHIG00000017074	TRMU	95	71.033	ENSATEG00000007814	trmu	97	71.033	Anabas_testudineus
ENSCHIG00000017074	TRMU	92	77.807	ENSAPLG00000016380	TRMU	98	77.807	Anas_platyrhynchos
ENSCHIG00000017074	TRMU	100	77.218	ENSACAG00000007720	TRMU	100	77.218	Anolis_carolinensis
ENSCHIG00000017074	TRMU	99	90.511	ENSANAG00000038053	TRMU	99	89.286	Aotus_nancymaae
ENSCHIG00000017074	TRMU	95	71.033	ENSACLG00000005395	trmu	98	70.190	Astatotilapia_calliptera
ENSCHIG00000017074	TRMU	99	69.100	ENSAMXG00000005282	trmu	99	69.100	Astyanax_mexicanus
ENSCHIG00000017074	TRMU	99	98.558	ENSBTAG00000005595	TRMU	99	98.558	Bos_taurus
ENSCHIG00000017074	TRMU	91	41.085	WBGene00007114	mttu-1	98	41.085	Caenorhabditis_elegans
ENSCHIG00000017074	TRMU	99	89.398	ENSCJAG00000000198	TRMU	99	89.398	Callithrix_jacchus
ENSCHIG00000017074	TRMU	99	93.674	ENSCAFG00000000779	TRMU	98	93.046	Canis_familiaris
ENSCHIG00000017074	TRMU	99	93.674	ENSCAFG00020009184	TRMU	98	93.046	Canis_lupus_dingo
ENSCHIG00000017074	TRMU	99	88.942	ENSTSYG00000003853	TRMU	99	88.942	Carlito_syrichta
ENSCHIG00000017074	TRMU	96	82.339	ENSCAPG00000013034	TRMU	98	82.692	Cavia_aperea
ENSCHIG00000017074	TRMU	99	87.711	ENSCPOG00000020780	TRMU	99	87.711	Cavia_porcellus
ENSCHIG00000017074	TRMU	99	89.398	ENSCCAG00000021641	TRMU	99	89.398	Cebus_capucinus
ENSCHIG00000017074	TRMU	100	89.311	ENSCATG00000032800	TRMU	99	89.423	Cercocebus_atys
ENSCHIG00000017074	TRMU	99	89.524	ENSCLAG00000017269	TRMU	99	89.928	Chinchilla_lanigera
ENSCHIG00000017074	TRMU	100	90.024	ENSCSAG00000005279	TRMU	99	90.144	Chlorocebus_sabaeus
ENSCHIG00000017074	TRMU	89	80.541	ENSCPBG00000011621	TRMU	93	80.541	Chrysemys_picta_bellii
ENSCHIG00000017074	TRMU	93	49.614	ENSCING00000019371	-	95	49.614	Ciona_intestinalis
ENSCHIG00000017074	TRMU	100	89.311	ENSCANG00000041645	TRMU	99	89.311	Colobus_angolensis_palliatus
ENSCHIG00000017074	TRMU	99	89.423	ENSCGRG00001001739	Trmu	99	89.831	Cricetulus_griseus_chok1gshd
ENSCHIG00000017074	TRMU	99	81.971	ENSCGRG00000002781	Trmu	99	82.324	Cricetulus_griseus_crigri
ENSCHIG00000017074	TRMU	97	67.901	ENSCSEG00000012382	trmu	97	67.901	Cynoglossus_semilaevis
ENSCHIG00000017074	TRMU	100	70.024	ENSCVAG00000001366	trmu	100	70.024	Cyprinodon_variegatus
ENSCHIG00000017074	TRMU	96	68.080	ENSDARG00000043734	trmu	96	68.080	Danio_rerio
ENSCHIG00000017074	TRMU	54	83.260	ENSDNOG00000047245	-	84	80.753	Dasypus_novemcinctus
ENSCHIG00000017074	TRMU	99	88.808	ENSDORG00000007455	Trmu	100	88.808	Dipodomys_ordii
ENSCHIG00000017074	TRMU	89	44.236	FBgn0040337	CG3021	95	45.052	Drosophila_melanogaster
ENSCHIG00000017074	TRMU	96	53.598	ENSEBUG00000007454	trmu	99	53.598	Eptatretus_burgeri
ENSCHIG00000017074	TRMU	98	92.665	ENSEASG00005021725	TRMU	99	92.086	Equus_asinus_asinus
ENSCHIG00000017074	TRMU	98	92.665	ENSECAG00000000467	TRMU	99	92.086	Equus_caballus
ENSCHIG00000017074	TRMU	71	72.148	ENSEEUG00000000074	-	78	92.593	Erinaceus_europaeus
ENSCHIG00000017074	TRMU	98	66.667	ENSELUG00000009464	trmu	99	67.120	Esox_lucius
ENSCHIG00000017074	TRMU	98	92.910	ENSFCAG00000006533	TRMU	99	92.308	Felis_catus
ENSCHIG00000017074	TRMU	89	78.307	ENSFALG00000010035	TRMU	95	78.307	Ficedula_albicollis
ENSCHIG00000017074	TRMU	93	87.113	ENSFDAG00000017472	TRMU	99	87.113	Fukomys_damarensis
ENSCHIG00000017074	TRMU	100	70.743	ENSFHEG00000003162	trmu	100	70.743	Fundulus_heteroclitus
ENSCHIG00000017074	TRMU	97	63.145	ENSGMOG00000001323	trmu	100	63.145	Gadus_morhua
ENSCHIG00000017074	TRMU	95	78.519	ENSGALG00000031922	TRMU	96	78.519	Gallus_gallus
ENSCHIG00000017074	TRMU	95	72.544	ENSGAFG00000013331	trmu	95	72.544	Gambusia_affinis
ENSCHIG00000017074	TRMU	100	66.745	ENSGACG00000019024	trmu	100	66.745	Gasterosteus_aculeatus
ENSCHIG00000017074	TRMU	100	90.499	ENSGGOG00000000203	TRMU	99	90.865	Gorilla_gorilla
ENSCHIG00000017074	TRMU	95	70.529	ENSHBUG00000023421	trmu	98	69.648	Haplochromis_burtoni
ENSCHIG00000017074	TRMU	99	87.981	ENSHGLG00000009278	TRMU	99	87.981	Heterocephalus_glaber_female
ENSCHIG00000017074	TRMU	99	87.981	ENSHGLG00100018863	TRMU	99	87.981	Heterocephalus_glaber_male
ENSCHIG00000017074	TRMU	99	68.856	ENSHCOG00000013459	trmu	99	68.856	Hippocampus_comes
ENSCHIG00000017074	TRMU	95	69.521	ENSIPUG00000009785	trmu	98	69.521	Ictalurus_punctatus
ENSCHIG00000017074	TRMU	99	90.865	ENSSTOG00000010993	TRMU	99	90.865	Ictidomys_tridecemlineatus
ENSCHIG00000017074	TRMU	99	89.904	ENSJJAG00000000667	Trmu	99	90.534	Jaculus_jaculus
ENSCHIG00000017074	TRMU	100	69.305	ENSKMAG00000008516	trmu	100	69.305	Kryptolebias_marmoratus
ENSCHIG00000017074	TRMU	100	67.703	ENSLBEG00000018831	trmu	100	67.703	Labrus_bergylta
ENSCHIG00000017074	TRMU	99	72.662	ENSLACG00000013713	TRMU	99	72.662	Latimeria_chalumnae
ENSCHIG00000017074	TRMU	99	72.381	ENSLOCG00000016066	trmu	99	72.381	Lepisosteus_oculatus
ENSCHIG00000017074	TRMU	99	77.088	ENSLAFG00000005129	TRMU	99	77.590	Loxodonta_africana
ENSCHIG00000017074	TRMU	100	90.024	ENSMFAG00000039767	TRMU	99	90.144	Macaca_fascicularis
ENSCHIG00000017074	TRMU	100	90.024	ENSMMUG00000000807	TRMU	99	90.144	Macaca_mulatta
ENSCHIG00000017074	TRMU	100	90.024	ENSMNEG00000028164	TRMU	99	90.144	Macaca_nemestrina
ENSCHIG00000017074	TRMU	100	89.549	ENSMLEG00000033884	TRMU	99	89.663	Mandrillus_leucophaeus
ENSCHIG00000017074	TRMU	99	68.447	ENSMAMG00000004717	trmu	99	68.447	Mastacembelus_armatus
ENSCHIG00000017074	TRMU	95	71.033	ENSMZEG00005015797	trmu	95	71.033	Maylandia_zebra
ENSCHIG00000017074	TRMU	76	77.469	ENSMGAG00000007550	TRMU	95	77.469	Meleagris_gallopavo
ENSCHIG00000017074	TRMU	99	88.942	ENSMAUG00000022282	Trmu	99	89.346	Mesocricetus_auratus
ENSCHIG00000017074	TRMU	99	91.041	ENSMICG00000029046	TRMU	100	91.041	Microcebus_murinus
ENSCHIG00000017074	TRMU	99	89.423	ENSMOCG00000014641	Trmu	99	89.831	Microtus_ochrogaster
ENSCHIG00000017074	TRMU	97	68.486	ENSMMOG00000007229	trmu	97	68.486	Mola_mola
ENSCHIG00000017074	TRMU	99	80.435	ENSMODG00000007433	TRMU	96	80.435	Monodelphis_domestica
ENSCHIG00000017074	TRMU	95	69.018	ENSMALG00000007721	trmu	95	69.018	Monopterus_albus
ENSCHIG00000017074	TRMU	100	87.770	MGP_CAROLIEiJ_G0020134	Trmu	100	87.770	Mus_caroli
ENSCHIG00000017074	TRMU	100	88.489	ENSMUSG00000022386	Trmu	100	88.489	Mus_musculus
ENSCHIG00000017074	TRMU	100	88.249	MGP_PahariEiJ_G0020139	Trmu	100	88.249	Mus_pahari
ENSCHIG00000017074	TRMU	100	88.489	MGP_SPRETEiJ_G0021031	Trmu	100	88.489	Mus_spretus
ENSCHIG00000017074	TRMU	100	91.686	ENSMPUG00000002523	TRMU	99	92.308	Mustela_putorius_furo
ENSCHIG00000017074	TRMU	99	90.024	ENSNGAG00000005132	Trmu	99	90.024	Nannospalax_galili
ENSCHIG00000017074	TRMU	97	69.951	ENSNBRG00000022690	trmu	100	69.951	Neolamprologus_brichardi
ENSCHIG00000017074	TRMU	100	90.024	ENSNLEG00000015773	TRMU	99	90.215	Nomascus_leucogenys
ENSCHIG00000017074	TRMU	79	71.341	ENSMEUG00000000216	TRMU	99	71.341	Notamacropus_eugenii
ENSCHIG00000017074	TRMU	99	89.234	ENSODEG00000014745	TRMU	99	89.639	Octodon_degus
ENSCHIG00000017074	TRMU	98	68.780	ENSONIG00000009821	trmu	99	68.780	Oreochromis_niloticus
ENSCHIG00000017074	TRMU	93	77.099	ENSOANG00000001891	TRMU	99	77.296	Ornithorhynchus_anatinus
ENSCHIG00000017074	TRMU	93	89.974	ENSOCUG00000003664	TRMU	97	88.861	Oryctolagus_cuniculus
ENSCHIG00000017074	TRMU	97	68.642	ENSORLG00000019015	trmu	98	68.642	Oryzias_latipes
ENSCHIG00000017074	TRMU	97	68.642	ENSORLG00020006830	trmu	98	68.642	Oryzias_latipes_hni
ENSCHIG00000017074	TRMU	97	68.642	ENSORLG00015003907	trmu	98	68.642	Oryzias_latipes_hsok
ENSCHIG00000017074	TRMU	58	67.635	ENSOMEG00000015541	trmu	87	67.635	Oryzias_melastigma
ENSCHIG00000017074	TRMU	99	89.423	ENSOGAG00000008096	TRMU	99	89.831	Otolemur_garnettii
ENSCHIG00000017074	TRMU	100	88.969	ENSOARG00000019475	TRMU	100	88.969	Ovis_aries
ENSCHIG00000017074	TRMU	100	90.499	ENSPPAG00000033944	TRMU	99	90.865	Pan_paniscus
ENSCHIG00000017074	TRMU	97	93.580	ENSPPRG00000004197	TRMU	99	92.788	Panthera_pardus
ENSCHIG00000017074	TRMU	64	92.857	ENSPTIG00000014122	TRMU	98	92.857	Panthera_tigris_altaica
ENSCHIG00000017074	TRMU	100	90.499	ENSPTRG00000014510	TRMU	99	90.865	Pan_troglodytes
ENSCHIG00000017074	TRMU	95	92.152	ENSPANG00000023074	TRMU	97	88.219	Papio_anubis
ENSCHIG00000017074	TRMU	99	68.281	ENSPKIG00000002849	trmu	99	68.281	Paramormyrops_kingsleyae
ENSCHIG00000017074	TRMU	92	77.285	ENSPSIG00000013020	TRMU	100	77.285	Pelodiscus_sinensis
ENSCHIG00000017074	TRMU	98	70.488	ENSPMGG00000004083	trmu	99	70.488	Periophthalmus_magnuspinnatus
ENSCHIG00000017074	TRMU	99	89.663	ENSPEMG00000014007	Trmu	99	90.073	Peromyscus_maniculatus_bairdii
ENSCHIG00000017074	TRMU	96	80.952	ENSPCIG00000009923	TRMU	98	79.137	Phascolarctos_cinereus
ENSCHIG00000017074	TRMU	96	68.486	ENSPFOG00000008197	trmu	90	68.486	Poecilia_formosa
ENSCHIG00000017074	TRMU	99	70.602	ENSPLAG00000008414	trmu	99	71.046	Poecilia_latipinna
ENSCHIG00000017074	TRMU	100	70.743	ENSPMEG00000004326	trmu	100	70.743	Poecilia_mexicana
ENSCHIG00000017074	TRMU	99	70.673	ENSPREG00000007980	trmu	100	70.504	Poecilia_reticulata
ENSCHIG00000017074	TRMU	100	90.499	ENSPPYG00000011949	TRMU	99	90.865	Pongo_abelii
ENSCHIG00000017074	TRMU	93	80.155	ENSPCAG00000013462	TRMU	99	80.155	Procavia_capensis
ENSCHIG00000017074	TRMU	99	90.625	ENSPCOG00000016539	TRMU	99	91.041	Propithecus_coquereli
ENSCHIG00000017074	TRMU	97	83.210	ENSPVAG00000013202	TRMU	99	82.933	Pteropus_vampyrus
ENSCHIG00000017074	TRMU	95	70.529	ENSPNYG00000005629	trmu	95	70.529	Pundamilia_nyererei
ENSCHIG00000017074	TRMU	95	71.392	ENSPNAG00000006339	trmu	93	71.392	Pygocentrus_nattereri
ENSCHIG00000017074	TRMU	100	89.448	ENSRNOG00000016465	Trmu	100	89.448	Rattus_norvegicus
ENSCHIG00000017074	TRMU	100	89.311	ENSRBIG00000038973	TRMU	99	89.423	Rhinopithecus_bieti
ENSCHIG00000017074	TRMU	100	89.549	ENSRROG00000004267	TRMU	99	89.663	Rhinopithecus_roxellana
ENSCHIG00000017074	TRMU	91	32.668	YDL033C	SLM3	91	32.668	Saccharomyces_cerevisiae
ENSCHIG00000017074	TRMU	99	89.398	ENSSBOG00000030184	TRMU	99	89.398	Saimiri_boliviensis_boliviensis
ENSCHIG00000017074	TRMU	91	68.158	ENSSFOG00015020664	trmu	99	68.158	Scleropages_formosus
ENSCHIG00000017074	TRMU	99	69.417	ENSSMAG00000019450	trmu	99	69.417	Scophthalmus_maximus
ENSCHIG00000017074	TRMU	100	70.504	ENSSDUG00000011913	trmu	100	70.504	Seriola_dumerili
ENSCHIG00000017074	TRMU	100	70.743	ENSSLDG00000011684	trmu	100	70.743	Seriola_lalandi_dorsalis
ENSCHIG00000017074	TRMU	99	66.346	ENSSPUG00000017123	TRMU	99	66.346	Sphenodon_punctatus
ENSCHIG00000017074	TRMU	100	70.024	ENSSPAG00000021875	trmu	100	70.024	Stegastes_partitus
ENSCHIG00000017074	TRMU	98	91.667	ENSSSCG00000000007	TRMU	99	90.453	Sus_scrofa
ENSCHIG00000017074	TRMU	89	78.437	ENSTGUG00000003663	-	99	78.437	Taeniopygia_guttata
ENSCHIG00000017074	TRMU	99	69.417	ENSTRUG00000001231	trmu	99	69.417	Takifugu_rubripes
ENSCHIG00000017074	TRMU	99	70.290	ENSTNIG00000010484	trmu	98	70.290	Tetraodon_nigroviridis
ENSCHIG00000017074	TRMU	93	55.039	ENSTBEG00000011276	-	99	55.065	Tupaia_belangeri
ENSCHIG00000017074	TRMU	99	92.143	ENSTTRG00000004160	TRMU	99	92.344	Tursiops_truncatus
ENSCHIG00000017074	TRMU	70	92.784	ENSUAMG00000024825	TRMU	97	92.784	Ursus_americanus
ENSCHIG00000017074	TRMU	97	75.862	ENSUMAG00000019079	TRMU	97	92.218	Ursus_maritimus
ENSCHIG00000017074	TRMU	53	79.909	ENSVPAG00000000685	-	100	79.909	Vicugna_pacos
ENSCHIG00000017074	TRMU	99	92.548	ENSVVUG00000024963	TRMU	99	92.548	Vulpes_vulpes
ENSCHIG00000017074	TRMU	99	73.995	ENSXETG00000023304	trmu	99	73.995	Xenopus_tropicalis
ENSCHIG00000017074	TRMU	99	68.646	ENSXCOG00000015105	trmu	100	68.483	Xiphophorus_couchianus
ENSCHIG00000017074	TRMU	99	70.913	ENSXMAG00000006697	trmu	100	70.743	Xiphophorus_maculatus