EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000017118 (Gene tree)
Gene ID: 102175520
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 34593 bases
Position: chr20:9263695-9298287
Accession: 102175520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000017151	MRP-S27	PF10037.9	8.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024960	PTCD2-201	4010	XM_005694568	ENSCHIP00000017151	384 (aa)	XP_005694625	UPI0003AF45E6

Gene Model

Click here to download ENSCHIG00000017118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017118	PTCD2	100	82.552	ENSG00000049883	PTCD2	100	82.266	Homo_sapiens
ENSCHIG00000017118	PTCD2	91	47.989	ENSAPOG00000020682	ptcd2	91	47.989	Acanthochromis_polyacanthus
ENSCHIG00000017118	PTCD2	100	81.510	ENSAMEG00000007194	PTCD2	99	81.510	Ailuropoda_melanoleuca
ENSCHIG00000017118	PTCD2	90	42.120	ENSACIG00000002053	ptcd2	100	42.120	Amphilophus_citrinellus
ENSCHIG00000017118	PTCD2	91	47.126	ENSAOCG00000006616	ptcd2	89	47.126	Amphiprion_ocellaris
ENSCHIG00000017118	PTCD2	91	47.143	ENSAPEG00000022926	ptcd2	89	47.143	Amphiprion_percula
ENSCHIG00000017118	PTCD2	92	59.207	ENSACAG00000009747	PTCD2	90	59.207	Anolis_carolinensis
ENSCHIG00000017118	PTCD2	100	83.073	ENSANAG00000029353	PTCD2	99	83.073	Aotus_nancymaae
ENSCHIG00000017118	PTCD2	94	44.321	ENSACLG00000027742	ptcd2	91	44.321	Astatotilapia_calliptera
ENSCHIG00000017118	PTCD2	85	44.512	ENSAMXG00000029404	ptcd2	88	44.512	Astyanax_mexicanus
ENSCHIG00000017118	PTCD2	100	95.052	ENSBTAG00000014675	PTCD2	100	95.052	Bos_taurus
ENSCHIG00000017118	PTCD2	100	82.292	ENSCJAG00000016364	PTCD2	99	82.292	Callithrix_jacchus
ENSCHIG00000017118	PTCD2	100	78.906	ENSCAFG00000007982	PTCD2	90	78.906	Canis_familiaris
ENSCHIG00000017118	PTCD2	90	81.792	ENSCAFG00020019147	PTCD2	97	81.792	Canis_lupus_dingo
ENSCHIG00000017118	PTCD2	100	75.781	ENSCPOG00000040168	PTCD2	100	75.781	Cavia_porcellus
ENSCHIG00000017118	PTCD2	100	81.771	ENSCCAG00000029389	-	99	81.771	Cebus_capucinus
ENSCHIG00000017118	PTCD2	83	77.500	ENSCCAG00000021996	-	98	77.500	Cebus_capucinus
ENSCHIG00000017118	PTCD2	100	80.208	ENSCATG00000019069	PTCD2	100	80.208	Cercocebus_atys
ENSCHIG00000017118	PTCD2	100	76.302	ENSCLAG00000000072	PTCD2	100	76.302	Chinchilla_lanigera
ENSCHIG00000017118	PTCD2	100	81.510	ENSCSAG00000015623	PTCD2	100	81.510	Chlorocebus_sabaeus
ENSCHIG00000017118	PTCD2	90	59.483	ENSCHOG00000010634	PTCD2	100	59.483	Choloepus_hoffmanni
ENSCHIG00000017118	PTCD2	99	53.786	ENSCPBG00000000216	PTCD2	98	53.786	Chrysemys_picta_bellii
ENSCHIG00000017118	PTCD2	100	80.729	ENSCANG00000035636	PTCD2	99	80.729	Colobus_angolensis_palliatus
ENSCHIG00000017118	PTCD2	100	74.740	ENSCGRG00001015289	Ptcd2	84	74.740	Cricetulus_griseus_chok1gshd
ENSCHIG00000017118	PTCD2	100	74.740	ENSCGRG00000006193	Ptcd2	84	74.740	Cricetulus_griseus_crigri
ENSCHIG00000017118	PTCD2	99	43.158	ENSCVAG00000001285	ptcd2	94	43.158	Cyprinodon_variegatus
ENSCHIG00000017118	PTCD2	98	44.149	ENSDARG00000035391	ptcd2	97	44.149	Danio_rerio
ENSCHIG00000017118	PTCD2	100	76.302	ENSDNOG00000008719	PTCD2	100	76.302	Dasypus_novemcinctus
ENSCHIG00000017118	PTCD2	100	78.608	ENSDORG00000004921	Ptcd2	100	78.608	Dipodomys_ordii
ENSCHIG00000017118	PTCD2	100	68.312	ENSETEG00000016542	PTCD2	99	68.312	Echinops_telfairi
ENSCHIG00000017118	PTCD2	100	83.073	ENSEASG00005018038	PTCD2	100	83.073	Equus_asinus_asinus
ENSCHIG00000017118	PTCD2	100	82.812	ENSECAG00000007022	PTCD2	98	82.812	Equus_caballus
ENSCHIG00000017118	PTCD2	100	76.823	ENSEEUG00000014031	PTCD2	99	76.823	Erinaceus_europaeus
ENSCHIG00000017118	PTCD2	92	50.000	ENSELUG00000003584	ptcd2	93	50.000	Esox_lucius
ENSCHIG00000017118	PTCD2	100	75.521	ENSFCAG00000045432	PTCD2	82	75.521	Felis_catus
ENSCHIG00000017118	PTCD2	85	51.376	ENSFALG00000010299	PTCD2	99	51.376	Ficedula_albicollis
ENSCHIG00000017118	PTCD2	100	76.302	ENSFDAG00000018461	PTCD2	100	76.302	Fukomys_damarensis
ENSCHIG00000017118	PTCD2	91	50.142	ENSGMOG00000003637	ptcd2	91	50.142	Gadus_morhua
ENSCHIG00000017118	PTCD2	92	49.858	ENSGALG00000038260	PTCD2	100	48.052	Gallus_gallus
ENSCHIG00000017118	PTCD2	92	59.773	ENSGAGG00000021952	PTCD2	91	59.773	Gopherus_agassizii
ENSCHIG00000017118	PTCD2	100	82.552	ENSGGOG00000010695	PTCD2	99	82.552	Gorilla_gorilla
ENSCHIG00000017118	PTCD2	94	44.321	ENSHBUG00000009191	ptcd2	91	44.321	Haplochromis_burtoni
ENSCHIG00000017118	PTCD2	100	76.042	ENSHGLG00000001234	PTCD2	100	76.042	Heterocephalus_glaber_female
ENSCHIG00000017118	PTCD2	100	76.302	ENSHGLG00100015419	PTCD2	100	76.302	Heterocephalus_glaber_male
ENSCHIG00000017118	PTCD2	99	45.170	ENSHCOG00000001703	ptcd2	97	45.170	Hippocampus_comes
ENSCHIG00000017118	PTCD2	85	45.566	ENSIPUG00000006080	ptcd2	91	45.559	Ictalurus_punctatus
ENSCHIG00000017118	PTCD2	99	80.679	ENSSTOG00000006596	PTCD2	99	80.679	Ictidomys_tridecemlineatus
ENSCHIG00000017118	PTCD2	100	78.646	ENSJJAG00000024388	Ptcd2	100	78.646	Jaculus_jaculus
ENSCHIG00000017118	PTCD2	91	43.182	ENSKMAG00000009329	ptcd2	91	43.182	Kryptolebias_marmoratus
ENSCHIG00000017118	PTCD2	90	47.110	ENSLBEG00000024871	ptcd2	88	47.110	Labrus_bergylta
ENSCHIG00000017118	PTCD2	93	55.556	ENSLOCG00000011122	ptcd2	94	55.556	Lepisosteus_oculatus
ENSCHIG00000017118	PTCD2	81	80.707	ENSLAFG00000004115	PTCD2	99	80.707	Loxodonta_africana
ENSCHIG00000017118	PTCD2	100	80.208	ENSMFAG00000031516	PTCD2	99	80.208	Macaca_fascicularis
ENSCHIG00000017118	PTCD2	100	79.948	ENSMNEG00000007537	PTCD2	100	79.948	Macaca_nemestrina
ENSCHIG00000017118	PTCD2	100	80.208	ENSMLEG00000031093	PTCD2	99	80.208	Mandrillus_leucophaeus
ENSCHIG00000017118	PTCD2	96	46.739	ENSMAMG00000018529	ptcd2	94	46.739	Mastacembelus_armatus
ENSCHIG00000017118	PTCD2	94	44.321	ENSMZEG00005003625	ptcd2	91	44.321	Maylandia_zebra
ENSCHIG00000017118	PTCD2	91	50.575	ENSMGAG00000005033	PTCD2	100	50.575	Meleagris_gallopavo
ENSCHIG00000017118	PTCD2	100	58.594	ENSMAUG00000020253	Ptcd2	100	58.594	Mesocricetus_auratus
ENSCHIG00000017118	PTCD2	100	80.469	ENSMICG00000004535	PTCD2	99	80.469	Microcebus_murinus
ENSCHIG00000017118	PTCD2	100	74.740	ENSMOCG00000019985	Ptcd2	100	74.740	Microtus_ochrogaster
ENSCHIG00000017118	PTCD2	100	56.510	ENSMODG00000001695	PTCD2	100	56.510	Monodelphis_domestica
ENSCHIG00000017118	PTCD2	94	46.814	ENSMALG00000022372	ptcd2	92	46.814	Monopterus_albus
ENSCHIG00000017118	PTCD2	100	72.656	MGP_CAROLIEiJ_G0018829	Ptcd2	100	72.656	Mus_caroli
ENSCHIG00000017118	PTCD2	100	71.875	ENSMUSG00000021650	Ptcd2	100	71.875	Mus_musculus
ENSCHIG00000017118	PTCD2	100	74.740	MGP_PahariEiJ_G0015904	Ptcd2	100	74.740	Mus_pahari
ENSCHIG00000017118	PTCD2	100	72.396	MGP_SPRETEiJ_G0019711	Ptcd2	100	72.396	Mus_spretus
ENSCHIG00000017118	PTCD2	100	82.812	ENSMPUG00000014401	PTCD2	100	82.812	Mustela_putorius_furo
ENSCHIG00000017118	PTCD2	100	81.771	ENSMLUG00000007374	PTCD2	99	81.771	Myotis_lucifugus
ENSCHIG00000017118	PTCD2	100	75.000	ENSNGAG00000005027	Ptcd2	100	75.000	Nannospalax_galili
ENSCHIG00000017118	PTCD2	86	44.848	ENSNBRG00000000092	-	100	44.848	Neolamprologus_brichardi
ENSCHIG00000017118	PTCD2	99	43.979	ENSNBRG00000008174	ptcd2	96	43.979	Neolamprologus_brichardi
ENSCHIG00000017118	PTCD2	100	81.771	ENSNLEG00000004516	PTCD2	99	81.771	Nomascus_leucogenys
ENSCHIG00000017118	PTCD2	78	53.000	ENSMEUG00000014012	-	82	52.077	Notamacropus_eugenii
ENSCHIG00000017118	PTCD2	100	72.656	ENSOPRG00000007290	PTCD2	99	72.656	Ochotona_princeps
ENSCHIG00000017118	PTCD2	100	78.125	ENSODEG00000016417	PTCD2	100	78.125	Octodon_degus
ENSCHIG00000017118	PTCD2	75	47.751	ENSONIG00000011269	ptcd2	85	47.751	Oreochromis_niloticus
ENSCHIG00000017118	PTCD2	95	79.670	ENSOCUG00000007970	PTCD2	100	77.865	Oryctolagus_cuniculus
ENSCHIG00000017118	PTCD2	90	47.399	ENSORLG00000003851	ptcd2	88	47.399	Oryzias_latipes
ENSCHIG00000017118	PTCD2	90	46.821	ENSORLG00020009823	ptcd2	90	46.821	Oryzias_latipes_hni
ENSCHIG00000017118	PTCD2	91	46.154	ENSORLG00015016777	ptcd2	100	46.154	Oryzias_latipes_hsok
ENSCHIG00000017118	PTCD2	96	43.617	ENSOMEG00000012396	ptcd2	90	43.617	Oryzias_melastigma
ENSCHIG00000017118	PTCD2	100	75.260	ENSOGAG00000008390	PTCD2	99	75.260	Otolemur_garnettii
ENSCHIG00000017118	PTCD2	100	98.438	ENSOARG00000005087	PTCD2	99	98.438	Ovis_aries
ENSCHIG00000017118	PTCD2	100	82.552	ENSPPAG00000028480	PTCD2	99	82.552	Pan_paniscus
ENSCHIG00000017118	PTCD2	100	82.031	ENSPTRG00000016968	PTCD2	99	82.031	Pan_troglodytes
ENSCHIG00000017118	PTCD2	90	82.319	ENSPANG00000006611	PTCD2	89	82.319	Papio_anubis
ENSCHIG00000017118	PTCD2	92	47.472	ENSPKIG00000019896	ptcd2	93	47.472	Paramormyrops_kingsleyae
ENSCHIG00000017118	PTCD2	82	59.494	ENSPSIG00000014559	PTCD2	98	59.494	Pelodiscus_sinensis
ENSCHIG00000017118	PTCD2	100	75.389	ENSPEMG00000000884	Ptcd2	100	75.389	Peromyscus_maniculatus_bairdii
ENSCHIG00000017118	PTCD2	100	59.375	ENSPCIG00000029047	PTCD2	100	59.375	Phascolarctos_cinereus
ENSCHIG00000017118	PTCD2	89	44.412	ENSPLAG00000010456	ptcd2	92	44.321	Poecilia_latipinna
ENSCHIG00000017118	PTCD2	91	45.402	ENSPREG00000021797	ptcd2	88	45.402	Poecilia_reticulata
ENSCHIG00000017118	PTCD2	100	71.354	ENSPPYG00000015543	PTCD2	99	71.354	Pongo_abelii
ENSCHIG00000017118	PTCD2	81	67.742	ENSPCAG00000006806	PTCD2	98	67.742	Procavia_capensis
ENSCHIG00000017118	PTCD2	100	82.292	ENSPVAG00000010935	PTCD2	99	82.292	Pteropus_vampyrus
ENSCHIG00000017118	PTCD2	94	44.321	ENSPNYG00000003122	ptcd2	91	44.321	Pundamilia_nyererei
ENSCHIG00000017118	PTCD2	93	48.066	ENSPNAG00000021490	ptcd2	94	48.343	Pygocentrus_nattereri
ENSCHIG00000017118	PTCD2	100	75.521	ENSRNOG00000028403	Ptcd2	100	75.521	Rattus_norvegicus
ENSCHIG00000017118	PTCD2	100	75.521	ENSRBIG00000032929	PTCD2	99	75.521	Rhinopithecus_bieti
ENSCHIG00000017118	PTCD2	100	80.469	ENSRROG00000000080	PTCD2	100	80.469	Rhinopithecus_roxellana
ENSCHIG00000017118	PTCD2	100	80.469	ENSSBOG00000018911	PTCD2	100	80.469	Saimiri_boliviensis_boliviensis
ENSCHIG00000017118	PTCD2	96	62.125	ENSSHAG00000003833	PTCD2	95	62.125	Sarcophilus_harrisii
ENSCHIG00000017118	PTCD2	84	48.297	ENSSFOG00015015415	ptcd2	84	48.297	Scleropages_formosus
ENSCHIG00000017118	PTCD2	90	44.380	ENSSMAG00000010350	ptcd2	90	44.380	Scophthalmus_maximus
ENSCHIG00000017118	PTCD2	90	48.127	ENSSDUG00000008142	ptcd2	87	48.127	Seriola_dumerili
ENSCHIG00000017118	PTCD2	90	48.127	ENSSLDG00000015284	ptcd2	91	48.127	Seriola_lalandi_dorsalis
ENSCHIG00000017118	PTCD2	81	71.290	ENSSARG00000004983	PTCD2	99	71.290	Sorex_araneus
ENSCHIG00000017118	PTCD2	100	52.987	ENSSPUG00000000176	PTCD2	96	52.987	Sphenodon_punctatus
ENSCHIG00000017118	PTCD2	91	46.839	ENSSPAG00000008591	ptcd2	89	46.839	Stegastes_partitus
ENSCHIG00000017118	PTCD2	100	85.677	ENSSSCG00000016975	PTCD2	90	85.677	Sus_scrofa
ENSCHIG00000017118	PTCD2	90	51.156	ENSTGUG00000005705	PTCD2	99	51.156	Taeniopygia_guttata
ENSCHIG00000017118	PTCD2	100	78.906	ENSTBEG00000016559	PTCD2	99	78.906	Tupaia_belangeri
ENSCHIG00000017118	PTCD2	100	88.542	ENSTTRG00000011851	PTCD2	99	88.542	Tursiops_truncatus
ENSCHIG00000017118	PTCD2	100	81.771	ENSUAMG00000007583	PTCD2	90	81.771	Ursus_americanus
ENSCHIG00000017118	PTCD2	100	81.771	ENSUMAG00000007666	PTCD2	100	81.771	Ursus_maritimus
ENSCHIG00000017118	PTCD2	100	85.417	ENSVPAG00000009597	PTCD2	99	85.417	Vicugna_pacos
ENSCHIG00000017118	PTCD2	100	78.906	ENSVVUG00000007299	-	100	78.906	Vulpes_vulpes
ENSCHIG00000017118	PTCD2	93	51.389	ENSXETG00000031652	PTCD2	94	51.389	Xenopus_tropicalis
ENSCHIG00000017118	PTCD2	89	44.412	ENSXMAG00000005940	ptcd2	84	44.044	Xiphophorus_maculatus