EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000017139 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 16044 bases
Position: chr5:58898189-58914232
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000017178	LSM	PF01423.22	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000024987	-	207	-	ENSCHIP00000017178	68 (aa)	-	UPI000D1946F4

Gene Model

Click here to download ENSCHIG00000017139's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017139's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000017139	-	56	47.368	ENSCHIG00000012864	-	54	47.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017139	-	87	91.525	ENSCATG00000003132	-	50	97.674	Cercocebus_atys
ENSCHIG00000017139	-	71	91.667	ENSCPBG00000001948	-	92	91.667	Chrysemys_picta_bellii
ENSCHIG00000017139	-	87	91.525	ENSCANG00000006758	-	50	97.674	Colobus_angolensis_palliatus
ENSCHIG00000017139	-	69	65.957	ENSFCAG00000037511	-	67	65.957	Felis_catus
ENSCHIG00000017139	-	90	70.492	ENSFCAG00000032773	-	90	70.492	Felis_catus
ENSCHIG00000017139	-	90	75.410	ENSGAGG00000014834	-	97	75.410	Gopherus_agassizii
ENSCHIG00000017139	-	85	81.034	ENSHBUG00000008160	-	90	81.034	Haplochromis_burtoni
ENSCHIG00000017139	-	63	95.349	ENSHCOG00000010425	-	66	95.349	Hippocampus_comes
ENSCHIG00000017139	-	87	91.525	ENSMFAG00000035517	-	50	97.674	Macaca_fascicularis
ENSCHIG00000017139	-	87	91.525	ENSMMUG00000009302	-	50	97.674	Macaca_mulatta
ENSCHIG00000017139	-	87	91.525	ENSMNEG00000030762	-	50	97.674	Macaca_nemestrina
ENSCHIG00000017139	-	87	91.525	ENSMLEG00000033558	-	50	97.674	Mandrillus_leucophaeus
ENSCHIG00000017139	-	88	88.333	ENSNLEG00000005835	-	50	97.674	Nomascus_leucogenys
ENSCHIG00000017139	-	78	96.226	ENSOGAG00000014320	-	100	96.226	Otolemur_garnettii
ENSCHIG00000017139	-	96	96.923	ENSPPAG00000003072	-	98	96.923	Pan_paniscus
ENSCHIG00000017139	-	63	72.093	ENSPPRG00000020147	-	68	72.093	Panthera_pardus
ENSCHIG00000017139	-	96	96.923	ENSPTRG00000005317	-	98	96.923	Pan_troglodytes
ENSCHIG00000017139	-	87	91.525	ENSPANG00000014632	-	50	95.455	Papio_anubis
ENSCHIG00000017139	-	63	97.674	ENSPCIG00000017205	-	50	97.674	Phascolarctos_cinereus
ENSCHIG00000017139	-	63	97.674	ENSPFOG00000020883	-	93	97.674	Poecilia_formosa
ENSCHIG00000017139	-	87	91.525	ENSRBIG00000028811	-	50	97.674	Rhinopithecus_bieti
ENSCHIG00000017139	-	87	89.831	ENSRROG00000031057	-	50	97.674	Rhinopithecus_roxellana
ENSCHIG00000017139	-	97	57.971	ENSVVUG00000003155	-	87	57.971	Vulpes_vulpes