EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCHIG00000017250 (Gene tree)
Gene ID
102187640
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Minus strand
Length
29118 bases
Position
chr3:91989509-92018626
Accession
102187640
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000017400CSDPF00313.223.3e-8515
ENSCHIP00000017400CSDPF00313.223.3e-8525
ENSCHIP00000017400CSDPF00313.223.3e-8535
ENSCHIP00000017400CSDPF00313.223.3e-8545
ENSCHIP00000017400CSDPF00313.223.3e-8555
ENSCHIP00000017383CSDPF00313.226.1e-8515
ENSCHIP00000017383CSDPF00313.226.1e-8525
ENSCHIP00000017383CSDPF00313.226.1e-8535
ENSCHIP00000017383CSDPF00313.226.1e-8545
ENSCHIP00000017383CSDPF00313.226.1e-8555
ENSCHIP00000017371CSDPF00313.221.2e-8415
ENSCHIP00000017371CSDPF00313.221.2e-8425
ENSCHIP00000017371CSDPF00313.221.2e-8435
ENSCHIP00000017371CSDPF00313.221.2e-8445
ENSCHIP00000017371CSDPF00313.221.2e-8455
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000025180CSDE1-2015077XM_005677836ENSCHIP00000017371844 (aa)XP_005677893UPI0008479D1C
ENSCHIT00000025208CSDE1-2034213XM_005677840ENSCHIP00000017400767 (aa)XP_005677897UPI00084781CE
ENSCHIT00000025192CSDE1-2024984XM_005677837ENSCHIP00000017383813 (aa)XP_005677894UPI000846BEE1
Gene Model
Click here to download ENSCHIG00000017250's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017250's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000017250CSDE110098.827ENSG00000009307CSDE1100100.000Homo_sapiens
ENSCHIG00000017250CSDE110077.403ENSAPOG00000015538csde110077.403Acanthochromis_polyacanthus
ENSCHIG00000017250CSDE110097.784ENSAMEG00000017129CSDE110097.543Ailuropoda_melanoleuca
ENSCHIG00000017250CSDE19076.757ENSACIG00000015175csde110076.757Amphilophus_citrinellus
ENSCHIG00000017250CSDE110077.532ENSAOCG00000011510csde110077.532Amphiprion_ocellaris
ENSCHIG00000017250CSDE110077.532ENSAPEG00000007194csde110077.532Amphiprion_percula
ENSCHIG00000017250CSDE110077.143ENSATEG00000003864csde110077.143Anabas_testudineus
ENSCHIG00000017250CSDE110091.656ENSAPLG00000008797CSDE110091.656Anas_platyrhynchos
ENSCHIG00000017250CSDE110088.095ENSACAG00000003120CSDE110091.980Anolis_carolinensis
ENSCHIG00000017250CSDE19372.340ENSANAG00000028396-9173.129Aotus_nancymaae
ENSCHIG00000017250CSDE110098.566ENSANAG00000024665CSDE110098.341Aotus_nancymaae
ENSCHIG00000017250CSDE110077.113ENSACLG00000013296csde110077.113Astatotilapia_calliptera
ENSCHIG00000017250CSDE110076.783ENSAMXG00000007436csde110076.783Astyanax_mexicanus
ENSCHIG00000017250CSDE110099.739ENSBTAG00000000678CSDE110099.739Bos_taurus
ENSCHIG00000017250CSDE110098.566ENSCJAG00000012565CSDE110098.460Callithrix_jacchus
ENSCHIG00000017250CSDE19898.670ENSCAFG00000009618CSDE110098.622Canis_familiaris
ENSCHIG00000017250CSDE110098.696ENSCAFG00020000481CSDE110098.696Canis_lupus_dingo
ENSCHIG00000017250CSDE110098.305ENSTSYG00000003747CSDE110098.371Carlito_syrichta
ENSCHIG00000017250CSDE19581.726ENSCAPG00000015128CSDE110081.726Cavia_aperea
ENSCHIG00000017250CSDE110091.762ENSCPOG00000040388CSDE110092.982Cavia_porcellus
ENSCHIG00000017250CSDE19673.942ENSCCAG00000030878-9173.942Cebus_capucinus
ENSCHIG00000017250CSDE110098.566ENSCCAG00000036794CSDE110098.622Cebus_capucinus
ENSCHIG00000017250CSDE19576.733ENSCCAG00000033677-9976.247Cebus_capucinus
ENSCHIG00000017250CSDE110098.827ENSCATG00000036962CSDE110098.697Cercocebus_atys
ENSCHIG00000017250CSDE110098.305ENSCLAG00000006618CSDE110098.371Chinchilla_lanigera
ENSCHIG00000017250CSDE110098.697ENSCSAG00000001658CSDE110098.697Chlorocebus_sabaeus
ENSCHIG00000017250CSDE110098.466ENSCHOG00000000918CSDE19198.466Choloepus_hoffmanni
ENSCHIG00000017250CSDE110092.047ENSCPBG00000016547CSDE110092.356Chrysemys_picta_bellii
ENSCHIG00000017250CSDE19741.963ENSCING00000014465-9643.049Ciona_intestinalis
ENSCHIG00000017250CSDE19642.222ENSCSAVG00000008100-9842.627Ciona_savignyi
ENSCHIG00000017250CSDE19992.505ENSCANG00000031069-10092.505Colobus_angolensis_palliatus
ENSCHIG00000017250CSDE110098.827ENSCANG00000035096CSDE110098.578Colobus_angolensis_palliatus
ENSCHIG00000017250CSDE110080.834ENSCGRG00001014011-10080.834Cricetulus_griseus_chok1gshd
ENSCHIG00000017250CSDE110098.044ENSCGRG00001016833-10098.120Cricetulus_griseus_chok1gshd
ENSCHIG00000017250CSDE110083.043ENSCGRG00000005831-10083.043Cricetulus_griseus_crigri
ENSCHIG00000017250CSDE19698.441ENSCGRG00000002225-10098.441Cricetulus_griseus_crigri
ENSCHIG00000017250CSDE110076.983ENSCSEG00000002620csde110076.983Cynoglossus_semilaevis
ENSCHIG00000017250CSDE110076.494ENSCVAG00000001344csde110076.494Cyprinodon_variegatus
ENSCHIG00000017250CSDE110075.094ENSDARG00000074758csde110077.653Danio_rerio
ENSCHIG00000017250CSDE110097.917ENSDNOG00000010287-9497.539Dasypus_novemcinctus
ENSCHIG00000017250CSDE18069.962ENSDNOG00000034464-10073.913Dasypus_novemcinctus
ENSCHIG00000017250CSDE19997.754ENSDORG00000011609Csde110097.754Dipodomys_ordii
ENSCHIG00000017250CSDE19747.951FBgn0263352Unr7348.594Drosophila_melanogaster
ENSCHIG00000017250CSDE19498.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSCHIG00000017250CSDE19087.025ENSETEG00000006280-10087.025Echinops_telfairi
ENSCHIG00000017250CSDE17968.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSCHIG00000017250CSDE19976.893ENSETEG00000013678-9976.893Echinops_telfairi
ENSCHIG00000017250CSDE19954.300ENSEBUG00000008647csde19954.157Eptatretus_burgeri
ENSCHIG00000017250CSDE110098.696ENSEASG00005006284CSDE110098.747Equus_asinus_asinus
ENSCHIG00000017250CSDE110098.696ENSECAG00000020885CSDE110098.747Equus_caballus
ENSCHIG00000017250CSDE19398.429ENSEEUG00000006286CSDE17498.429Erinaceus_europaeus
ENSCHIG00000017250CSDE110075.550ENSELUG00000015507csde110075.550Esox_lucius
ENSCHIG00000017250CSDE110098.957ENSFCAG00000029266CSDE110098.957Felis_catus
ENSCHIG00000017250CSDE110087.719ENSFALG00000003407CSDE110091.604Ficedula_albicollis
ENSCHIG00000017250CSDE19998.204ENSFDAG00000007882CSDE110098.204Fukomys_damarensis
ENSCHIG00000017250CSDE19877.188ENSFHEG00000010799csde110076.779Fundulus_heteroclitus
ENSCHIG00000017250CSDE19974.028ENSGMOG00000012731csde110076.596Gadus_morhua
ENSCHIG00000017250CSDE19887.852ENSGALG00000002139CSDE19891.816Gallus_gallus
ENSCHIG00000017250CSDE19276.067ENSGAFG00000005241csde19576.067Gambusia_affinis
ENSCHIG00000017250CSDE19974.812ENSGACG00000004544csde110077.375Gasterosteus_aculeatus
ENSCHIG00000017250CSDE110091.656ENSGAGG00000017685CSDE110091.980Gopherus_agassizii
ENSCHIG00000017250CSDE110098.827ENSGGOG00000002164CSDE110098.827Gorilla_gorilla
ENSCHIG00000017250CSDE110077.113ENSHBUG00000020315csde110077.113Haplochromis_burtoni
ENSCHIG00000017250CSDE110079.672ENSHGLG00000019549-10081.830Heterocephalus_glaber_female
ENSCHIG00000017250CSDE19985.151ENSHGLG00000007471-9885.151Heterocephalus_glaber_female
ENSCHIG00000017250CSDE19975.910ENSHGLG00000000650-9979.799Heterocephalus_glaber_female
ENSCHIG00000017250CSDE110089.179ENSHGLG00000003829-10089.179Heterocephalus_glaber_female
ENSCHIG00000017250CSDE19988.772ENSHGLG00000008555-10088.772Heterocephalus_glaber_female
ENSCHIG00000017250CSDE19689.755ENSHGLG00000010039-10089.755Heterocephalus_glaber_female
ENSCHIG00000017250CSDE110088.266ENSHGLG00000009620-10088.972Heterocephalus_glaber_female
ENSCHIG00000017250CSDE19980.350ENSHGLG00100002245-9984.105Heterocephalus_glaber_male
ENSCHIG00000017250CSDE19689.532ENSHGLG00100006910-10089.532Heterocephalus_glaber_male
ENSCHIG00000017250CSDE110084.224ENSHGLG00100012072-10084.224Heterocephalus_glaber_male
ENSCHIG00000017250CSDE110098.305ENSHGLG00100019438-10098.371Heterocephalus_glaber_male
ENSCHIG00000017250CSDE19383.682ENSHGLG00100004195-10083.682Heterocephalus_glaber_male
ENSCHIG00000017250CSDE19982.523ENSHGLG00100007287-9882.523Heterocephalus_glaber_male
ENSCHIG00000017250CSDE19682.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSCHIG00000017250CSDE110079.688ENSHGLG00100001846-10079.688Heterocephalus_glaber_male
ENSCHIG00000017250CSDE110076.073ENSHCOG00000004158csde110076.073Hippocampus_comes
ENSCHIG00000017250CSDE110076.524ENSIPUG00000000355csde110076.524Ictalurus_punctatus
ENSCHIG00000017250CSDE110080.435ENSSTOG00000030994-10080.435Ictidomys_tridecemlineatus
ENSCHIG00000017250CSDE18481.653ENSSTOG00000032722-9881.653Ictidomys_tridecemlineatus
ENSCHIG00000017250CSDE19997.904ENSJJAG00000019571Csde110097.904Jaculus_jaculus
ENSCHIG00000017250CSDE110073.973ENSKMAG00000005685csde110076.020Kryptolebias_marmoratus
ENSCHIG00000017250CSDE110077.403ENSLBEG00000014770csde110077.403Labrus_bergylta
ENSCHIG00000017250CSDE19778.839ENSLACG00000018452CSDE19679.050Latimeria_chalumnae
ENSCHIG00000017250CSDE110077.164ENSLOCG00000010413csde19679.828Lepisosteus_oculatus
ENSCHIG00000017250CSDE110097.132ENSLAFG00000007150CSDE19697.132Loxodonta_africana
ENSCHIG00000017250CSDE110098.827ENSMFAG00000003674CSDE110098.827Macaca_fascicularis
ENSCHIG00000017250CSDE110098.827ENSMMUG00000001974CSDE110098.827Macaca_mulatta
ENSCHIG00000017250CSDE110098.827ENSMNEG00000045247CSDE110098.697Macaca_nemestrina
ENSCHIG00000017250CSDE110098.566ENSMLEG00000038673CSDE110098.460Mandrillus_leucophaeus
ENSCHIG00000017250CSDE110078.052ENSMAMG00000008821csde110078.052Mastacembelus_armatus
ENSCHIG00000017250CSDE110077.113ENSMZEG00005021675csde110077.113Maylandia_zebra
ENSCHIG00000017250CSDE110091.536ENSMGAG00000016381CSDE110091.536Meleagris_gallopavo
ENSCHIG00000017250CSDE19998.204ENSMAUG00000014031Csde110098.204Mesocricetus_auratus
ENSCHIG00000017250CSDE110098.044ENSMICG00000002050CSDE110097.909Microcebus_murinus
ENSCHIG00000017250CSDE110098.044ENSMOCG00000018960Csde110098.120Microtus_ochrogaster
ENSCHIG00000017250CSDE110077.532ENSMMOG00000015075csde110077.532Mola_mola
ENSCHIG00000017250CSDE110094.928ENSMODG00000004685CSDE110095.865Monodelphis_domestica
ENSCHIG00000017250CSDE110077.532ENSMALG00000007132csde110077.532Monopterus_albus
ENSCHIG00000017250CSDE110097.784MGP_CAROLIEiJ_G0025444Csde110097.870Mus_caroli
ENSCHIG00000017250CSDE110097.914ENSMUSG00000068823Csde110098.054Mus_musculus
ENSCHIG00000017250CSDE110098.175MGP_PahariEiJ_G0026888Csde110098.246Mus_pahari
ENSCHIG00000017250CSDE110098.175MGP_SPRETEiJ_G0026394Csde110098.246Mus_spretus
ENSCHIG00000017250CSDE19895.019ENSMPUG00000005753CSDE19998.978Mustela_putorius_furo
ENSCHIG00000017250CSDE110098.044ENSMLUG00000005681CSDE110097.663Myotis_lucifugus
ENSCHIG00000017250CSDE19998.054ENSNGAG00000021929Csde110098.054Nannospalax_galili
ENSCHIG00000017250CSDE19670.824ENSNGAG00000012599-10070.824Nannospalax_galili
ENSCHIG00000017250CSDE110077.113ENSNBRG00000020808csde110077.113Neolamprologus_brichardi
ENSCHIG00000017250CSDE110098.696ENSNLEG00000004842CSDE110098.578Nomascus_leucogenys
ENSCHIG00000017250CSDE19397.087ENSMEUG00000002677CSDE19697.087Notamacropus_eugenii
ENSCHIG00000017250CSDE19895.973ENSOPRG00000005002CSDE18894.246Ochotona_princeps
ENSCHIG00000017250CSDE19997.904ENSODEG00000007383-10097.995Octodon_degus
ENSCHIG00000017250CSDE19667.920ENSODEG00000005979-9867.920Octodon_degus
ENSCHIG00000017250CSDE110072.583ENSONIG00000009309csde110074.969Oreochromis_niloticus
ENSCHIG00000017250CSDE110075.810ENSOANG00000003346-10079.676Ornithorhynchus_anatinus
ENSCHIG00000017250CSDE110098.305ENSOCUG00000016438CSDE110097.867Oryctolagus_cuniculus
ENSCHIG00000017250CSDE110077.633ENSORLG00000000707csde110077.633Oryzias_latipes
ENSCHIG00000017250CSDE110074.687ENSORLG00020005148csde110075.336Oryzias_latipes_hni
ENSCHIG00000017250CSDE110077.633ENSORLG00015019415csde110077.633Oryzias_latipes_hsok
ENSCHIG00000017250CSDE110078.312ENSOMEG00000015656csde110078.312Oryzias_melastigma
ENSCHIG00000017250CSDE110098.696ENSOGAG00000012127CSDE110098.278Otolemur_garnettii
ENSCHIG00000017250CSDE110099.877ENSOARG00000020034CSDE110099.877Ovis_aries
ENSCHIG00000017250CSDE110098.827ENSPPAG00000025861CSDE110098.827Pan_paniscus
ENSCHIG00000017250CSDE110098.957ENSPPRG00000006747CSDE110098.934Panthera_pardus
ENSCHIG00000017250CSDE110098.957ENSPTIG00000015468CSDE110098.997Panthera_tigris_altaica
ENSCHIG00000017250CSDE110098.827ENSPTRG00000033721CSDE110098.872Pan_troglodytes
ENSCHIG00000017250CSDE110098.827ENSPANG00000018873CSDE110098.827Papio_anubis
ENSCHIG00000017250CSDE110076.723ENSPKIG00000009459csde110076.723Paramormyrops_kingsleyae
ENSCHIG00000017250CSDE19195.354ENSPSIG00000003823CSDE19695.354Pelodiscus_sinensis
ENSCHIG00000017250CSDE110077.143ENSPMGG00000000772csde110077.143Periophthalmus_magnuspinnatus
ENSCHIG00000017250CSDE19998.503ENSPEMG00000020357-10098.503Peromyscus_maniculatus_bairdii
ENSCHIG00000017250CSDE110094.215ENSPCIG00000022587CSDE110095.990Phascolarctos_cinereus
ENSCHIG00000017250CSDE19974.845ENSPFOG00000012664csde110075.311Poecilia_formosa
ENSCHIG00000017250CSDE19770.814ENSPLAG00000017680csde19370.814Poecilia_latipinna
ENSCHIG00000017250CSDE19870.713ENSPMEG00000005094csde19670.713Poecilia_mexicana
ENSCHIG00000017250CSDE110073.192ENSPREG00000011631csde110073.709Poecilia_reticulata
ENSCHIG00000017250CSDE110094.862ENSPPYG00000000996CSDE110098.747Pongo_abelii
ENSCHIG00000017250CSDE110097.940ENSPCAG00000014368CSDE19697.940Procavia_capensis
ENSCHIG00000017250CSDE19083.209ENSPCOG00000008223-9083.209Propithecus_coquereli
ENSCHIG00000017250CSDE110098.566ENSPCOG00000017893CSDE110098.566Propithecus_coquereli
ENSCHIG00000017250CSDE110092.438ENSPVAG00000008225CSDE110092.128Pteropus_vampyrus
ENSCHIG00000017250CSDE110077.113ENSPNYG00000013745csde110077.113Pundamilia_nyererei
ENSCHIG00000017250CSDE110077.273ENSPNAG00000001958csde110077.273Pygocentrus_nattereri
ENSCHIG00000017250CSDE110094.486ENSRNOG00000061058Csde110098.371Rattus_norvegicus
ENSCHIG00000017250CSDE110093.252ENSRBIG00000038966-10093.252Rhinopithecus_bieti
ENSCHIG00000017250CSDE110095.052ENSRBIG00000038088-9997.235Rhinopithecus_bieti
ENSCHIG00000017250CSDE110098.827ENSRROG00000043101CSDE110098.697Rhinopithecus_roxellana
ENSCHIG00000017250CSDE110098.566ENSSBOG00000035592CSDE110098.460Saimiri_boliviensis_boliviensis
ENSCHIG00000017250CSDE110095.698ENSSHAG00000009831CSDE110095.698Sarcophilus_harrisii
ENSCHIG00000017250CSDE110076.983ENSSFOG00015007498csde110077.013Scleropages_formosus
ENSCHIG00000017250CSDE110077.922ENSSMAG00000007203csde110077.922Scophthalmus_maximus
ENSCHIG00000017250CSDE110077.403ENSSDUG00000015380csde110077.403Seriola_dumerili
ENSCHIG00000017250CSDE110077.403ENSSLDG00000008819csde110077.403Seriola_lalandi_dorsalis
ENSCHIG00000017250CSDE110097.653ENSSARG00000000738CSDE110096.560Sorex_araneus
ENSCHIG00000017250CSDE110091.395ENSSPUG00000008714CSDE110091.729Sphenodon_punctatus
ENSCHIG00000017250CSDE110077.403ENSSPAG00000000716csde110077.403Stegastes_partitus
ENSCHIG00000017250CSDE110098.957ENSSSCG00000006752CSDE110098.957Sus_scrofa
ENSCHIG00000017250CSDE110086.750ENSTGUG00000000972CSDE110090.625Taeniopygia_guttata
ENSCHIG00000017250CSDE110074.382ENSTRUG00000007996csde110074.382Takifugu_rubripes
ENSCHIG00000017250CSDE18880.989ENSTNIG00000010878csde110080.989Tetraodon_nigroviridis
ENSCHIG00000017250CSDE19398.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSCHIG00000017250CSDE110098.696ENSTTRG00000015583CSDE110098.524Tursiops_truncatus
ENSCHIG00000017250CSDE18998.714ENSUAMG00000021779-10098.714Ursus_americanus
ENSCHIG00000017250CSDE18994.042ENSUAMG00000024289-9994.042Ursus_americanus
ENSCHIG00000017250CSDE110091.134ENSUMAG00000009720-9890.791Ursus_maritimus
ENSCHIG00000017250CSDE19299.050ENSUMAG00000011714-9999.050Ursus_maritimus
ENSCHIG00000017250CSDE110098.131ENSVPAG00000000749CSDE18598.101Vicugna_pacos
ENSCHIG00000017250CSDE18698.538ENSVVUG00000009890CSDE19498.538Vulpes_vulpes
ENSCHIG00000017250CSDE110082.147ENSXETG00000021448csde110085.768Xenopus_tropicalis
ENSCHIG00000017250CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSCHIG00000017250CSDE19877.454ENSXMAG00000009080csde19877.454Xiphophorus_maculatus

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