EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000017351 (Gene tree)
Gene ID: 102183432
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 15803 bases
Position: chr14:94431313-94447115
Accession: 102183432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000017546	KH_1	PF00013.29	4.7e-12	1	1
ENSCHIP00000017546	DEAD	PF00270.29	1.5e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000025357	-	2573	XM_018058117	ENSCHIP00000017546	643 (aa)	XP_017913606	UPI0005FA9FC6

Gene Model

Click here to download ENSCHIG00000017351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000017351	-	68	44.595	ENSCHIG00000011800	DDX5	71	43.805
ENSCHIG00000017351	-	64	33.255	ENSCHIG00000006275	DDX52	72	33.255
ENSCHIG00000017351	-	53	35.196	ENSCHIG00000000285	DDX50	50	35.196
ENSCHIG00000017351	-	57	40.933	ENSCHIG00000024903	-	61	39.604
ENSCHIG00000017351	-	55	33.894	ENSCHIG00000022153	EIF4A1	87	33.894
ENSCHIG00000017351	-	88	70.855	ENSCHIG00000020582	-	96	69.949
ENSCHIG00000017351	-	58	35.897	ENSCHIG00000026011	DDX47	83	35.897
ENSCHIG00000017351	-	63	37.292	ENSCHIG00000009756	DDX41	75	34.917
ENSCHIG00000017351	-	51	36.336	ENSCHIG00000019280	DDX18	51	36.228
ENSCHIG00000017351	-	61	36.250	ENSCHIG00000007753	DDX27	53	36.250
ENSCHIG00000017351	-	53	30.556	ENSCHIG00000020402	DDX55	59	30.556
ENSCHIG00000017351	-	59	33.590	ENSCHIG00000019910	DDX49	80	33.590
ENSCHIG00000017351	-	68	39.121	ENSCHIG00000018783	DDX23	57	39.121
ENSCHIG00000017351	-	59	38.987	ENSCHIG00000015567	DDX4	55	38.987
ENSCHIG00000017351	-	58	32.804	ENSCHIG00000012317	EIF4A2	92	32.804
ENSCHIG00000017351	-	62	33.578	ENSCHIG00000014558	DDX59	64	33.578
ENSCHIG00000017351	-	55	32.386	ENSCHIG00000024284	EIF4A3	85	32.386
ENSCHIG00000017351	-	56	33.062	ENSCHIG00000000047	-	64	33.062
ENSCHIG00000017351	-	59	30.048	ENSCHIG00000009658	DDX28	75	30.048
ENSCHIG00000017351	-	58	40.863	ENSCHIG00000010585	-	60	40.863
ENSCHIG00000017351	-	58	30.415	ENSCHIG00000020011	DDX31	59	30.415
ENSCHIG00000017351	-	54	33.994	ENSCHIG00000026114	DDX6	71	33.994
ENSCHIG00000017351	-	69	44.273	ENSCHIG00000021332	DDX17	88	44.267

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017351	-	99	77.538	ENSAMEG00000007851	-	100	77.538	Ailuropoda_melanoleuca
ENSCHIG00000017351	-	100	98.134	ENSBTAG00000021814	-	100	98.134	Bos_taurus
ENSCHIG00000017351	-	99	73.791	ENSCAFG00020002717	-	99	73.791	Canis_lupus_dingo
ENSCHIG00000017351	-	99	76.971	ENSCAFG00020010029	-	100	76.971	Canis_lupus_dingo
ENSCHIG00000017351	-	77	73.307	ENSCAPG00000004247	-	100	73.307	Cavia_aperea
ENSCHIG00000017351	-	99	76.507	ENSCPOG00000003991	-	100	76.507	Cavia_porcellus
ENSCHIG00000017351	-	99	71.473	ENSCLAG00000010261	-	100	71.473	Chinchilla_lanigera
ENSCHIG00000017351	-	60	78.274	ENSCHOG00000003450	-	69	78.274	Choloepus_hoffmanni
ENSCHIG00000017351	-	99	76.507	ENSCGRG00001001145	Ddx43	100	76.507	Cricetulus_griseus_chok1gshd
ENSCHIG00000017351	-	87	80.462	ENSCGRG00000010217	Ddx43	100	80.462	Cricetulus_griseus_crigri
ENSCHIG00000017351	-	100	77.573	ENSDNOG00000017589	-	100	77.573	Dasypus_novemcinctus
ENSCHIG00000017351	-	99	77.743	ENSDORG00000030010	Ddx43	100	77.743	Dipodomys_ordii
ENSCHIG00000017351	-	80	87.500	ENSETEG00000001887	-	81	87.500	Echinops_telfairi
ENSCHIG00000017351	-	99	79.167	ENSEASG00005004346	-	89	79.167	Equus_asinus_asinus
ENSCHIG00000017351	-	99	79.167	ENSECAG00000017971	DDX43	98	79.167	Equus_caballus
ENSCHIG00000017351	-	100	74.846	ENSFCAG00000031631	-	100	74.846	Felis_catus
ENSCHIG00000017351	-	87	77.620	ENSHGLG00000001118	-	100	77.620	Heterocephalus_glaber_female
ENSCHIG00000017351	-	96	74.116	ENSHGLG00100011895	-	99	73.259	Heterocephalus_glaber_male
ENSCHIG00000017351	-	87	71.071	ENSSTOG00000032538	-	100	71.071	Ictidomys_tridecemlineatus
ENSCHIG00000017351	-	99	76.043	ENSJJAG00000014184	Ddx43	100	76.043	Jaculus_jaculus
ENSCHIG00000017351	-	93	80.265	ENSLAFG00000012755	-	99	80.265	Loxodonta_africana
ENSCHIG00000017351	-	99	76.352	ENSMAUG00000001441	Ddx43	100	76.352	Mesocricetus_auratus
ENSCHIG00000017351	-	99	76.271	ENSMOCG00000012956	Ddx43	100	76.425	Microtus_ochrogaster
ENSCHIG00000017351	-	99	76.352	MGP_CAROLIEiJ_G0032467	Ddx43	100	76.352	Mus_caroli
ENSCHIG00000017351	-	99	76.662	ENSMUSG00000070291	Ddx43	100	76.662	Mus_musculus
ENSCHIG00000017351	-	78	82.143	MGP_PahariEiJ_G0015333	Ddx43	100	69.612	Mus_pahari
ENSCHIG00000017351	-	99	76.662	MGP_SPRETEiJ_G0033607	Ddx43	100	76.662	Mus_spretus
ENSCHIG00000017351	-	100	79.045	ENSMPUG00000004342	-	100	79.045	Mustela_putorius_furo
ENSCHIG00000017351	-	99	78.341	ENSMLUG00000017604	-	100	78.341	Myotis_lucifugus
ENSCHIG00000017351	-	99	75.116	ENSNGAG00000015102	Ddx43	100	75.425	Nannospalax_galili
ENSCHIG00000017351	-	74	86.607	ENSOPRG00000013523	-	86	86.607	Ochotona_princeps
ENSCHIG00000017351	-	84	77.348	ENSODEG00000016207	-	99	77.348	Octodon_degus
ENSCHIG00000017351	-	99	72.393	ENSOCUG00000006338	-	100	73.006	Oryctolagus_cuniculus
ENSCHIG00000017351	-	99	62.888	ENSOCUG00000025811	-	99	62.888	Oryctolagus_cuniculus
ENSCHIG00000017351	-	100	99.067	ENSOARG00000010873	-	100	99.067	Ovis_aries
ENSCHIG00000017351	-	100	75.000	ENSPTIG00000017842	-	100	75.000	Panthera_tigris_altaica
ENSCHIG00000017351	-	87	80.639	ENSPEMG00000023986	Ddx43	100	80.639	Peromyscus_maniculatus_bairdii
ENSCHIG00000017351	-	99	75.425	ENSPCAG00000005962	-	99	75.697	Procavia_capensis
ENSCHIG00000017351	-	87	83.009	ENSPVAG00000012718	-	100	83.009	Pteropus_vampyrus
ENSCHIG00000017351	-	99	76.662	ENSRNOG00000050868	Ddx43	100	76.662	Rattus_norvegicus
ENSCHIG00000017351	-	84	81.204	ENSSARG00000013493	-	100	81.204	Sorex_araneus
ENSCHIG00000017351	-	100	85.070	ENSSSCG00000004287	-	100	85.070	Sus_scrofa
ENSCHIG00000017351	-	87	82.111	ENSTTRG00000001488	-	99	82.111	Tursiops_truncatus
ENSCHIG00000017351	-	83	73.665	ENSUAMG00000012894	-	83	73.665	Ursus_americanus
ENSCHIG00000017351	-	100	77.658	ENSUMAG00000012291	-	100	77.658	Ursus_maritimus
ENSCHIG00000017351	-	94	79.339	ENSVPAG00000004969	-	100	79.339	Vicugna_pacos
ENSCHIG00000017351	-	99	76.971	ENSVVUG00000013908	-	100	76.971	Vulpes_vulpes