EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000017392 (Gene tree)
Gene ID: 102184890
Gene Symbol: DKC1
Alias: Cbf5|DKC|NAP57|NOLA4|XAP101|dyskerin
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 14177 bases
Position: chrLWLT01000053.1:210739-224915
Accession: 102184890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000017633	TruB_N	PF01509.18	2e-21	1	1
ENSCHIP00000017633	PUA	PF01472.20	4.5e-18	1	1
ENSCHIP00000017633	DKCLD	PF08068.12	1.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000025444	DKC1-201	1770	XM_018044621	ENSCHIP00000017633	506 (aa)	XP_017900110	UPI0006B1293A

Gene Model

Click here to download ENSCHIG00000017392's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017392's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017392	DKC1	100	91.440	ENSG00000130826	DKC1	99	99.024	Homo_sapiens
ENSCHIG00000017392	DKC1	86	80.909	ENSAPOG00000007799	dkc1	84	80.822	Acanthochromis_polyacanthus
ENSCHIG00000017392	DKC1	90	95.186	ENSAMEG00000002776	DKC1	100	91.321	Ailuropoda_melanoleuca
ENSCHIG00000017392	DKC1	88	78.222	ENSACIG00000022614	dkc1	93	80.134	Amphilophus_citrinellus
ENSCHIG00000017392	DKC1	93	75.051	ENSAOCG00000013159	dkc1	86	80.230	Amphiprion_ocellaris
ENSCHIG00000017392	DKC1	93	75.051	ENSAPEG00000002284	dkc1	96	75.670	Amphiprion_percula
ENSCHIG00000017392	DKC1	80	83.698	ENSATEG00000013682	dkc1	81	83.293	Anabas_testudineus
ENSCHIG00000017392	DKC1	86	86.207	ENSACAG00000015600	DKC1	76	85.327	Anolis_carolinensis
ENSCHIG00000017392	DKC1	92	93.562	ENSANAG00000022732	DKC1	100	90.467	Aotus_nancymaae
ENSCHIG00000017392	DKC1	87	79.909	ENSACLG00000015605	dkc1	94	77.273	Astatotilapia_calliptera
ENSCHIG00000017392	DKC1	88	80.537	ENSAMXG00000017108	dkc1	87	79.221	Astyanax_mexicanus
ENSCHIG00000017392	DKC1	100	98.617	ENSBTAG00000013045	DKC1	100	98.617	Bos_taurus
ENSCHIG00000017392	DKC1	82	66.586	WBGene00010478	K01G5.5	97	63.470	Caenorhabditis_elegans
ENSCHIG00000017392	DKC1	100	90.680	ENSCJAG00000004210	DKC1	100	90.680	Callithrix_jacchus
ENSCHIG00000017392	DKC1	97	90.239	ENSCAFG00000019620	-	97	90.600	Canis_familiaris
ENSCHIG00000017392	DKC1	90	81.779	ENSCAFG00000009311	-	91	81.996	Canis_familiaris
ENSCHIG00000017392	DKC1	90	81.838	ENSCAFG00020009379	-	87	82.057	Canis_lupus_dingo
ENSCHIG00000017392	DKC1	97	90.239	ENSCAFG00020008918	-	97	90.600	Canis_lupus_dingo
ENSCHIG00000017392	DKC1	99	88.484	ENSTSYG00000007681	DKC1	99	88.100	Carlito_syrichta
ENSCHIG00000017392	DKC1	81	92.665	ENSCAPG00000003342	DKC1	92	93.333	Cavia_aperea
ENSCHIG00000017392	DKC1	97	90.342	ENSCPOG00000008825	DKC1	100	88.694	Cavia_porcellus
ENSCHIG00000017392	DKC1	100	82.101	ENSCCAG00000027418	DKC1	100	81.907	Cebus_capucinus
ENSCHIG00000017392	DKC1	100	90.661	ENSCATG00000033602	DKC1	100	90.661	Cercocebus_atys
ENSCHIG00000017392	DKC1	96	90.204	ENSCLAG00000000720	DKC1	96	90.000	Chinchilla_lanigera
ENSCHIG00000017392	DKC1	100	90.856	ENSCSAG00000006706	DKC1	100	90.856	Chlorocebus_sabaeus
ENSCHIG00000017392	DKC1	93	82.105	ENSCPBG00000005858	DKC1	94	86.168	Chrysemys_picta_bellii
ENSCHIG00000017392	DKC1	83	75.352	ENSCING00000004599	-	83	74.773	Ciona_intestinalis
ENSCHIG00000017392	DKC1	78	78.426	ENSCSAVG00000010047	-	97	74.194	Ciona_savignyi
ENSCHIG00000017392	DKC1	100	90.856	ENSCANG00000027987	DKC1	100	90.856	Colobus_angolensis_palliatus
ENSCHIG00000017392	DKC1	97	88.531	ENSCGRG00001014574	-	99	88.039	Cricetulus_griseus_chok1gshd
ENSCHIG00000017392	DKC1	78	73.858	ENSCGRG00001016789	-	79	75.946	Cricetulus_griseus_chok1gshd
ENSCHIG00000017392	DKC1	97	88.531	ENSCGRG00000016075	-	99	88.039	Cricetulus_griseus_crigri
ENSCHIG00000017392	DKC1	78	73.858	ENSCGRG00000014809	-	77	75.946	Cricetulus_griseus_crigri
ENSCHIG00000017392	DKC1	92	78.205	ENSCSEG00000012633	dkc1	94	80.631	Cynoglossus_semilaevis
ENSCHIG00000017392	DKC1	87	79.326	ENSCVAG00000010155	dkc1	84	79.773	Cyprinodon_variegatus
ENSCHIG00000017392	DKC1	80	85.396	ENSDARG00000016484	dkc1	85	80.995	Danio_rerio
ENSCHIG00000017392	DKC1	100	90.253	ENSDNOG00000004218	DKC1	90	93.534	Dasypus_novemcinctus
ENSCHIG00000017392	DKC1	59	83.333	ENSDORG00000013566	-	100	83.333	Dipodomys_ordii
ENSCHIG00000017392	DKC1	87	69.021	FBgn0259937	Nop60B	89	67.488	Drosophila_melanogaster
ENSCHIG00000017392	DKC1	91	87.097	ENSETEG00000016095	DKC1	94	87.097	Echinops_telfairi
ENSCHIG00000017392	DKC1	67	78.107	ENSEBUG00000015962	dkc1	99	82.253	Eptatretus_burgeri
ENSCHIG00000017392	DKC1	100	91.346	ENSEASG00005007484	DKC1	100	90.000	Equus_asinus_asinus
ENSCHIG00000017392	DKC1	100	91.346	ENSECAG00000023524	DKC1	100	90.000	Equus_caballus
ENSCHIG00000017392	DKC1	84	90.141	ENSEEUG00000003323	DKC1	100	90.141	Erinaceus_europaeus
ENSCHIG00000017392	DKC1	87	80.674	ENSELUG00000014538	dkc1	90	79.821	Esox_lucius
ENSCHIG00000017392	DKC1	100	91.124	ENSFCAG00000006577	DKC1	100	91.124	Felis_catus
ENSCHIG00000017392	DKC1	86	83.447	ENSFALG00000011496	DKC1	85	82.550	Ficedula_albicollis
ENSCHIG00000017392	DKC1	96	89.634	ENSFDAG00000002516	DKC1	100	88.998	Fukomys_damarensis
ENSCHIG00000017392	DKC1	87	80.726	ENSFHEG00000004627	dkc1	89	78.664	Fundulus_heteroclitus
ENSCHIG00000017392	DKC1	77	83.376	ENSGMOG00000017277	dkc1	100	83.376	Gadus_morhua
ENSCHIG00000017392	DKC1	86	86.437	ENSGALG00000005054	DKC1	86	85.011	Gallus_gallus
ENSCHIG00000017392	DKC1	88	79.910	ENSGAFG00000011486	dkc1	73	80.778	Gambusia_affinis
ENSCHIG00000017392	DKC1	79	86.683	ENSGACG00000004373	dkc1	96	89.058	Gasterosteus_aculeatus
ENSCHIG00000017392	DKC1	93	82.526	ENSGAGG00000011330	DKC1	89	84.731	Gopherus_agassizii
ENSCHIG00000017392	DKC1	100	91.440	ENSGGOG00000001045	DKC1	100	91.440	Gorilla_gorilla
ENSCHIG00000017392	DKC1	86	80.594	ENSHBUG00000012436	dkc1	92	77.056	Haplochromis_burtoni
ENSCHIG00000017392	DKC1	97	89.000	ENSHGLG00000000649	DKC1	100	88.201	Heterocephalus_glaber_female
ENSCHIG00000017392	DKC1	96	88.664	ENSHGLG00100001153	DKC1	100	88.063	Heterocephalus_glaber_male
ENSCHIG00000017392	DKC1	78	86.329	ENSHCOG00000021099	dkc1	91	77.342	Hippocampus_comes
ENSCHIG00000017392	DKC1	91	79.050	ENSIPUG00000010309	dkc1	88	78.879	Ictalurus_punctatus
ENSCHIG00000017392	DKC1	97	80.762	ENSSTOG00000011904	-	93	80.561	Ictidomys_tridecemlineatus
ENSCHIG00000017392	DKC1	100	82.261	ENSSTOG00000020149	-	100	81.871	Ictidomys_tridecemlineatus
ENSCHIG00000017392	DKC1	92	93.362	ENSSTOG00000001074	-	95	93.763	Ictidomys_tridecemlineatus
ENSCHIG00000017392	DKC1	59	84.000	ENSJJAG00000010086	-	100	84.000	Jaculus_jaculus
ENSCHIG00000017392	DKC1	87	78.458	ENSKMAG00000008010	dkc1	86	78.719	Kryptolebias_marmoratus
ENSCHIG00000017392	DKC1	86	80.137	ENSLBEG00000019122	dkc1	92	78.233	Labrus_bergylta
ENSCHIG00000017392	DKC1	88	81.737	ENSLACG00000014025	DKC1	91	88.693	Latimeria_chalumnae
ENSCHIG00000017392	DKC1	87	81.655	ENSLOCG00000013713	dkc1	87	84.543	Lepisosteus_oculatus
ENSCHIG00000017392	DKC1	91	90.948	ENSLAFG00000000221	DKC1	90	90.948	Loxodonta_africana
ENSCHIG00000017392	DKC1	100	90.661	ENSMFAG00000032398	DKC1	86	90.078	Macaca_fascicularis
ENSCHIG00000017392	DKC1	100	90.856	ENSMMUG00000005768	DKC1	100	90.856	Macaca_mulatta
ENSCHIG00000017392	DKC1	100	90.856	ENSMNEG00000034503	DKC1	100	90.856	Macaca_nemestrina
ENSCHIG00000017392	DKC1	100	90.856	ENSMLEG00000034422	DKC1	100	90.856	Mandrillus_leucophaeus
ENSCHIG00000017392	DKC1	81	84.841	ENSMAMG00000005427	dkc1	90	86.070	Mastacembelus_armatus
ENSCHIG00000017392	DKC1	86	80.822	ENSMZEG00005014503	dkc1	92	77.273	Maylandia_zebra
ENSCHIG00000017392	DKC1	86	77.951	ENSMGAG00000009238	DKC1	97	79.510	Meleagris_gallopavo
ENSCHIG00000017392	DKC1	59	83.667	ENSMAUG00000016454	-	100	83.667	Mesocricetus_auratus
ENSCHIG00000017392	DKC1	89	80.652	ENSMICG00000002818	-	99	83.791	Microcebus_murinus
ENSCHIG00000017392	DKC1	100	90.354	ENSMICG00000038751	-	100	89.764	Microcebus_murinus
ENSCHIG00000017392	DKC1	59	80.667	ENSMOCG00000001169	-	100	80.667	Microtus_ochrogaster
ENSCHIG00000017392	DKC1	79	85.930	ENSMMOG00000020348	dkc1	87	85.930	Mola_mola
ENSCHIG00000017392	DKC1	90	86.564	ENSMODG00000009243	DKC1	78	86.564	Monodelphis_domestica
ENSCHIG00000017392	DKC1	87	80.227	ENSMALG00000009454	dkc1	85	80.227	Monopterus_albus
ENSCHIG00000017392	DKC1	97	77.734	MGP_CAROLIEiJ_G0033191	Dkc1	100	92.568	Mus_caroli
ENSCHIG00000017392	DKC1	97	88.235	ENSMUSG00000031403	Dkc1	100	83.667	Mus_musculus
ENSCHIG00000017392	DKC1	97	88.306	MGP_PahariEiJ_G0031735	Dkc1	99	87.819	Mus_pahari
ENSCHIG00000017392	DKC1	97	88.283	MGP_SPRETEiJ_G0034351	Dkc1	99	86.982	Mus_spretus
ENSCHIG00000017392	DKC1	97	90.220	ENSMPUG00000016136	DKC1	93	90.476	Mustela_putorius_furo
ENSCHIG00000017392	DKC1	91	87.852	ENSMLUG00000011918	DKC1	88	87.852	Myotis_lucifugus
ENSCHIG00000017392	DKC1	59	84.000	ENSNGAG00000015724	-	100	84.000	Nannospalax_galili
ENSCHIG00000017392	DKC1	78	86.616	ENSNBRG00000005638	dkc1	80	86.181	Neolamprologus_brichardi
ENSCHIG00000017392	DKC1	100	91.051	ENSNLEG00000014323	DKC1	100	91.051	Nomascus_leucogenys
ENSCHIG00000017392	DKC1	85	84.615	ENSMEUG00000001066	DKC1	92	84.941	Notamacropus_eugenii
ENSCHIG00000017392	DKC1	96	75.410	ENSOPRG00000005248	DKC1	73	89.617	Ochotona_princeps
ENSCHIG00000017392	DKC1	59	85.000	ENSODEG00000000549	-	100	85.000	Octodon_degus
ENSCHIG00000017392	DKC1	88	93.049	ENSODEG00000011816	-	90	92.842	Octodon_degus
ENSCHIG00000017392	DKC1	87	81.222	ENSONIG00000013889	dkc1	91	79.039	Oreochromis_niloticus
ENSCHIG00000017392	DKC1	84	90.443	ENSOANG00000008713	-	88	90.719	Ornithorhynchus_anatinus
ENSCHIG00000017392	DKC1	57	65.449	ENSOANG00000022295	-	84	65.449	Ornithorhynchus_anatinus
ENSCHIG00000017392	DKC1	97	91.903	ENSOCUG00000012646	DKC1	100	91.016	Oryctolagus_cuniculus
ENSCHIG00000017392	DKC1	86	79.770	ENSORLG00000018748	dkc1	89	77.042	Oryzias_latipes
ENSCHIG00000017392	DKC1	81	84.069	ENSOMEG00000005786	dkc1	82	85.356	Oryzias_melastigma
ENSCHIG00000017392	DKC1	97	90.119	ENSOGAG00000003399	DKC1	97	90.119	Otolemur_garnettii
ENSCHIG00000017392	DKC1	100	98.814	ENSOARG00000003047	DKC1	100	98.814	Ovis_aries
ENSCHIG00000017392	DKC1	100	91.440	ENSPPAG00000023820	DKC1	100	91.440	Pan_paniscus
ENSCHIG00000017392	DKC1	91	94.978	ENSPPRG00000009104	DKC1	100	91.124	Panthera_pardus
ENSCHIG00000017392	DKC1	90	93.157	ENSPTIG00000017469	DKC1	99	89.264	Panthera_tigris_altaica
ENSCHIG00000017392	DKC1	97	92.354	ENSPTRG00000043416	-	84	91.549	Pan_troglodytes
ENSCHIG00000017392	DKC1	100	91.440	ENSPTRG00000022449	DKC1	100	91.440	Pan_troglodytes
ENSCHIG00000017392	DKC1	100	90.856	ENSPANG00000011978	DKC1	100	90.856	Papio_anubis
ENSCHIG00000017392	DKC1	92	75.934	ENSPKIG00000008443	dkc1	90	80.594	Paramormyrops_kingsleyae
ENSCHIG00000017392	DKC1	73	90.591	ENSPSIG00000013765	DKC1	86	93.296	Pelodiscus_sinensis
ENSCHIG00000017392	DKC1	87	76.126	ENSPMGG00000004097	dkc1	81	76.126	Periophthalmus_magnuspinnatus
ENSCHIG00000017392	DKC1	97	55.444	ENSPEMG00000013348	Dkc1	99	95.897	Peromyscus_maniculatus_bairdii
ENSCHIG00000017392	DKC1	89	87.973	ENSPCIG00000016706	DKC1	76	87.692	Phascolarctos_cinereus
ENSCHIG00000017392	DKC1	88	80.180	ENSPFOG00000018653	dkc1	85	81.050	Poecilia_formosa
ENSCHIG00000017392	DKC1	88	80.180	ENSPLAG00000003272	dkc1	77	81.050	Poecilia_latipinna
ENSCHIG00000017392	DKC1	88	80.180	ENSPMEG00000010413	dkc1	85	81.050	Poecilia_mexicana
ENSCHIG00000017392	DKC1	88	80.405	ENSPREG00000004100	dkc1	84	81.279	Poecilia_reticulata
ENSCHIG00000017392	DKC1	99	91.356	ENSPPYG00000020892	DKC1	100	91.356	Pongo_abelii
ENSCHIG00000017392	DKC1	74	94.118	ENSPCAG00000015034	DKC1	73	94.118	Procavia_capensis
ENSCHIG00000017392	DKC1	100	90.467	ENSPCOG00000026874	DKC1	100	90.661	Propithecus_coquereli
ENSCHIG00000017392	DKC1	97	90.283	ENSPVAG00000009222	DKC1	97	88.664	Pteropus_vampyrus
ENSCHIG00000017392	DKC1	86	80.227	ENSPNYG00000020063	dkc1	87	80.594	Pundamilia_nyererei
ENSCHIG00000017392	DKC1	91	80.172	ENSPNAG00000005780	dkc1	94	76.160	Pygocentrus_nattereri
ENSCHIG00000017392	DKC1	97	81.818	ENSRNOG00000055562	Dkc1	91	84.665	Rattus_norvegicus
ENSCHIG00000017392	DKC1	100	90.856	ENSRBIG00000028457	DKC1	86	90.272	Rhinopithecus_bieti
ENSCHIG00000017392	DKC1	100	90.856	ENSRROG00000044780	DKC1	100	90.856	Rhinopithecus_roxellana
ENSCHIG00000017392	DKC1	77	70.951	YLR175W	-	94	64.097	Saccharomyces_cerevisiae
ENSCHIG00000017392	DKC1	100	90.680	ENSSBOG00000033746	DKC1	100	91.068	Saimiri_boliviensis_boliviensis
ENSCHIG00000017392	DKC1	96	84.049	ENSSHAG00000002463	DKC1	97	86.768	Sarcophilus_harrisii
ENSCHIG00000017392	DKC1	92	80.562	ENSSFOG00015009585	dkc1	88	80.870	Scleropages_formosus
ENSCHIG00000017392	DKC1	87	81.549	ENSSMAG00000002552	dkc1	88	81.922	Scophthalmus_maximus
ENSCHIG00000017392	DKC1	92	78.556	ENSSDUG00000009963	dkc1	85	81.633	Seriola_dumerili
ENSCHIG00000017392	DKC1	90	78.947	ENSSLDG00000019342	dkc1	90	81.986	Seriola_lalandi_dorsalis
ENSCHIG00000017392	DKC1	98	84.032	ENSSARG00000001822	DKC1	99	83.200	Sorex_araneus
ENSCHIG00000017392	DKC1	85	86.697	ENSSPUG00000018907	DKC1	86	85.022	Sphenodon_punctatus
ENSCHIG00000017392	DKC1	80	85.112	ENSSPAG00000002585	dkc1	86	78.492	Stegastes_partitus
ENSCHIG00000017392	DKC1	100	89.635	ENSSSCG00000012823	DKC1	100	89.443	Sus_scrofa
ENSCHIG00000017392	DKC1	79	85.427	ENSTGUG00000006781	DKC1	88	85.176	Taeniopygia_guttata
ENSCHIG00000017392	DKC1	86	80.505	ENSTRUG00000004413	dkc1	85	80.963	Takifugu_rubripes
ENSCHIG00000017392	DKC1	86	65.909	ENSTNIG00000002582	dkc1	85	65.909	Tetraodon_nigroviridis
ENSCHIG00000017392	DKC1	70	87.328	ENSTBEG00000011262	DKC1	100	85.675	Tupaia_belangeri
ENSCHIG00000017392	DKC1	74	92.459	ENSTTRG00000008089	DKC1	74	92.459	Tursiops_truncatus
ENSCHIG00000017392	DKC1	95	90.835	ENSUAMG00000022721	DKC1	93	96.145	Ursus_americanus
ENSCHIG00000017392	DKC1	95	90.428	ENSUMAG00000016899	DKC1	99	93.612	Ursus_maritimus
ENSCHIG00000017392	DKC1	99	88.825	ENSVVUG00000020734	-	87	89.442	Vulpes_vulpes
ENSCHIG00000017392	DKC1	97	73.780	ENSVVUG00000021671	-	80	79.630	Vulpes_vulpes
ENSCHIG00000017392	DKC1	93	79.957	ENSXETG00000032517	DKC1	88	81.498	Xenopus_tropicalis
ENSCHIG00000017392	DKC1	88	79.505	ENSXCOG00000005498	dkc1	91	80.365	Xiphophorus_couchianus
ENSCHIG00000017392	DKC1	88	79.955	ENSXMAG00000004919	dkc1	85	80.822	Xiphophorus_maculatus