EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000017396 (Gene tree)
Gene ID: 102180256
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 3506 bases
Position: chr19:50373359-50376864
Accession: 102180256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000017680	RRM_1	PF00076.22	1.3e-13	1	1
ENSCHIP00000017673	RRM_1	PF00076.22	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000025484	ALYREF-201	804	XM_018065454	ENSCHIP00000017673	267 (aa)	XP_017920943	UPI000D195908
ENSCHIT00000025492	ALYREF-202	720	-	ENSCHIP00000017680	239 (aa)	-	UPI000D192F8C

Gene Model

Click here to download ENSCHIG00000017396's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03013	RNA transport	KEGG
chx03015	mRNA surveillance pathway	KEGG
chx03040	Spliceosome	KEGG
chx05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017396's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017396	ALYREF	97	97.287	ENSG00000183684	ALYREF	97	97.287	Homo_sapiens
ENSCHIG00000017396	ALYREF	97	67.742	ENSAPOG00000018455	ALYREF	100	71.685	Acanthochromis_polyacanthus
ENSCHIG00000017396	ALYREF	78	87.204	ENSAMEG00000017463	ALYREF	74	92.432	Ailuropoda_melanoleuca
ENSCHIG00000017396	ALYREF	97	76.426	ENSACAG00000010526	ALYREF	100	73.664	Anolis_carolinensis
ENSCHIG00000017396	ALYREF	97	81.783	ENSANAG00000028229	-	78	82.946	Aotus_nancymaae
ENSCHIG00000017396	ALYREF	74	89.130	ENSANAG00000022638	-	75	95.480	Aotus_nancymaae
ENSCHIG00000017396	ALYREF	97	99.225	ENSBTAG00000008498	ALYREF	100	99.225	Bos_taurus
ENSCHIG00000017396	ALYREF	97	96.512	ENSCJAG00000039942	ALYREF	97	96.512	Callithrix_jacchus
ENSCHIG00000017396	ALYREF	97	98.450	ENSCAFG00000005877	ALYREF	100	98.450	Canis_familiaris
ENSCHIG00000017396	ALYREF	97	98.450	ENSCAFG00020009815	ALYREF	100	98.450	Canis_lupus_dingo
ENSCHIG00000017396	ALYREF	78	91.979	ENSTSYG00000002272	ALYREF	74	97.647	Carlito_syrichta
ENSCHIG00000017396	ALYREF	51	96.296	ENSCAPG00000014727	-	100	96.296	Cavia_aperea
ENSCHIG00000017396	ALYREF	97	97.287	ENSCPOG00000013710	ALYREF	100	97.287	Cavia_porcellus
ENSCHIG00000017396	ALYREF	97	96.899	ENSCCAG00000020578	-	97	96.899	Cebus_capucinus
ENSCHIG00000017396	ALYREF	92	86.758	ENSCCAG00000030237	-	99	83.562	Cebus_capucinus
ENSCHIG00000017396	ALYREF	97	97.287	ENSCATG00000033169	ALYREF	97	97.287	Cercocebus_atys
ENSCHIG00000017396	ALYREF	97	88.760	ENSCLAG00000015026	ALYREF	100	88.760	Chinchilla_lanigera
ENSCHIG00000017396	ALYREF	97	97.287	ENSCSAG00000002216	ALYREF	97	97.287	Chlorocebus_sabaeus
ENSCHIG00000017396	ALYREF	76	89.785	ENSCANG00000034056	ALYREF	90	94.118	Colobus_angolensis_palliatus
ENSCHIG00000017396	ALYREF	97	93.798	ENSCGRG00001018191	-	100	91.473	Cricetulus_griseus_chok1gshd
ENSCHIG00000017396	ALYREF	72	90.625	ENSCGRG00000015871	-	89	87.571	Cricetulus_griseus_crigri
ENSCHIG00000017396	ALYREF	70	56.186	ENSCSEG00000015438	-	98	57.609	Cynoglossus_semilaevis
ENSCHIG00000017396	ALYREF	67	96.089	ENSDNOG00000002563	ALYREF	75	96.089	Dasypus_novemcinctus
ENSCHIG00000017396	ALYREF	85	82.301	ENSDORG00000025849	-	73	95.580	Dipodomys_ordii
ENSCHIG00000017396	ALYREF	69	94.220	ENSETEG00000016596	ALYREF	100	93.855	Echinops_telfairi
ENSCHIG00000017396	ALYREF	97	98.837	ENSEASG00005005824	ALYREF	95	98.837	Equus_asinus_asinus
ENSCHIG00000017396	ALYREF	97	98.837	ENSECAG00000018754	ALYREF	95	98.837	Equus_caballus
ENSCHIG00000017396	ALYREF	64	97.674	ENSEEUG00000010164	ALYREF	100	97.674	Erinaceus_europaeus
ENSCHIG00000017396	ALYREF	97	98.837	ENSFCAG00000022549	ALYREF	98	98.837	Felis_catus
ENSCHIG00000017396	ALYREF	83	87.374	ENSFDAG00000001213	ALYREF	95	86.256	Fukomys_damarensis
ENSCHIG00000017396	ALYREF	97	83.462	ENSGALG00000007237	ALYREF	100	83.077	Gallus_gallus
ENSCHIG00000017396	ALYREF	97	69.925	ENSGACG00000013328	ALYREF	100	70.787	Gasterosteus_aculeatus
ENSCHIG00000017396	ALYREF	97	82.890	ENSGAGG00000008536	ALYREF	100	81.749	Gopherus_agassizii
ENSCHIG00000017396	ALYREF	97	97.674	ENSGGOG00000013935	ALYREF	99	97.287	Gorilla_gorilla
ENSCHIG00000017396	ALYREF	97	96.124	ENSHGLG00000008293	ALYREF	100	96.124	Heterocephalus_glaber_female
ENSCHIG00000017396	ALYREF	78	82.018	ENSHGLG00100006949	ALYREF	77	95.055	Heterocephalus_glaber_male
ENSCHIG00000017396	ALYREF	97	67.910	ENSHCOG00000015046	ALYREF	100	69.231	Hippocampus_comes
ENSCHIG00000017396	ALYREF	97	93.798	ENSJJAG00000004134	-	100	93.798	Jaculus_jaculus
ENSCHIG00000017396	ALYREF	97	70.189	ENSLACG00000005694	ALYREF	100	70.566	Latimeria_chalumnae
ENSCHIG00000017396	ALYREF	71	95.767	ENSLAFG00000003083	ALYREF	98	94.054	Loxodonta_africana
ENSCHIG00000017396	ALYREF	97	94.574	ENSMFAG00000001394	ALYREF	97	94.574	Macaca_fascicularis
ENSCHIG00000017396	ALYREF	97	97.287	ENSMMUG00000012884	ALYREF	97	97.287	Macaca_mulatta
ENSCHIG00000017396	ALYREF	97	97.287	ENSMNEG00000043666	ALYREF	97	97.287	Macaca_nemestrina
ENSCHIG00000017396	ALYREF	76	89.785	ENSMLEG00000043353	ALYREF	81	94.643	Mandrillus_leucophaeus
ENSCHIG00000017396	ALYREF	92	86.301	ENSMAUG00000020552	-	99	84.475	Mesocricetus_auratus
ENSCHIG00000017396	ALYREF	97	97.287	ENSMICG00000017403	ALYREF	97	97.287	Microcebus_murinus
ENSCHIG00000017396	ALYREF	97	83.908	ENSMOCG00000016792	-	99	88.128	Microtus_ochrogaster
ENSCHIG00000017396	ALYREF	96	96.109	ENSMODG00000003030	ALYREF	84	96.109	Monodelphis_domestica
ENSCHIG00000017396	ALYREF	97	69.314	ENSMALG00000019408	ALYREF	100	71.014	Monopterus_albus
ENSCHIG00000017396	ALYREF	97	96.512	MGP_CAROLIEiJ_G0017529	Alyref	100	96.512	Mus_caroli
ENSCHIG00000017396	ALYREF	91	87.054	MGP_CAROLIEiJ_G0014874	Alyref2	98	85.268	Mus_caroli
ENSCHIG00000017396	ALYREF	88	66.239	ENSMUSG00000112856	Gm4305	62	70.270	Mus_musculus
ENSCHIG00000017396	ALYREF	88	66.383	ENSMUSG00000091101	Gm4302	61	70.270	Mus_musculus
ENSCHIG00000017396	ALYREF	97	61.423	ENSMUSG00000086727	4931428L18Rik	97	59.833	Mus_musculus
ENSCHIG00000017396	ALYREF	97	62.238	ENSMUSG00000095022	Gm20765	97	56.757	Mus_musculus
ENSCHIG00000017396	ALYREF	97	61.379	ENSMUSG00000090854	Gm4340	97	55.894	Mus_musculus
ENSCHIG00000017396	ALYREF	88	65.106	ENSMUSG00000094314	Gm4301	62	69.189	Mus_musculus
ENSCHIG00000017396	ALYREF	97	62.238	ENSMUSG00000097550	Gm21304	97	56.757	Mus_musculus
ENSCHIG00000017396	ALYREF	88	65.106	ENSMUSG00000096640	Gm4312	62	69.189	Mus_musculus
ENSCHIG00000017396	ALYREF	88	66.239	ENSMUSG00000096744	Gm4307	62	70.270	Mus_musculus
ENSCHIG00000017396	ALYREF	97	62.238	ENSMUSG00000097427	Gm6763	98	67.568	Mus_musculus
ENSCHIG00000017396	ALYREF	97	62.238	ENSMUSG00000094144	Gm21312	97	56.757	Mus_musculus
ENSCHIG00000017396	ALYREF	91	89.498	ENSMUSG00000060244	Alyref2	98	87.671	Mus_musculus
ENSCHIG00000017396	ALYREF	97	62.238	ENSMUSG00000097878	Gm8764	98	67.568	Mus_musculus
ENSCHIG00000017396	ALYREF	97	61.049	ENSMUSG00000117091	AC153137.1	97	59.414	Mus_musculus
ENSCHIG00000017396	ALYREF	97	96.512	ENSMUSG00000025134	Alyref	100	96.512	Mus_musculus
ENSCHIG00000017396	ALYREF	88	66.239	ENSMUSG00000112931	Gm4303	62	70.270	Mus_musculus
ENSCHIG00000017396	ALYREF	97	62.238	ENSMUSG00000091779	Gm21293	97	56.757	Mus_musculus
ENSCHIG00000017396	ALYREF	77	74.093	MGP_PahariEiJ_G0027255	-	80	71.892	Mus_pahari
ENSCHIG00000017396	ALYREF	77	74.093	MGP_PahariEiJ_G0027254	-	82	71.892	Mus_pahari
ENSCHIG00000017396	ALYREF	97	96.512	MGP_PahariEiJ_G0018655	-	100	96.512	Mus_pahari
ENSCHIG00000017396	ALYREF	71	97.884	MGP_PahariEiJ_G0018656	-	99	97.884	Mus_pahari
ENSCHIG00000017396	ALYREF	97	96.512	MGP_SPRETEiJ_G0018373	Alyref	100	96.512	Mus_spretus
ENSCHIG00000017396	ALYREF	67	57.456	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSCHIG00000017396	ALYREF	91	89.041	MGP_SPRETEiJ_G0015679	Alyref2	98	87.215	Mus_spretus
ENSCHIG00000017396	ALYREF	91	65.487	ENSMLUG00000024447	-	76	62.500	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	94	58.594	ENSMLUG00000022869	-	81	57.983	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	94	64.341	ENSMLUG00000002626	-	98	65.504	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	94	58.846	ENSMLUG00000024471	-	82	56.198	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	94	62.353	ENSMLUG00000030407	-	77	61.345	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	94	56.589	ENSMLUG00000015043	-	98	55.833	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	79	83.721	ENSMLUG00000009555	-	66	93.296	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	97	52.060	ENSMLUG00000023213	-	77	53.234	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	94	63.241	ENSMLUG00000024976	-	79	61.277	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	81	59.361	ENSMLUG00000028343	-	85	65.730	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	99	68.302	ENSMLUG00000027516	-	83	65.283	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	94	63.529	ENSMLUG00000025677	-	77	63.025	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	94	64.143	ENSMLUG00000026271	-	79	62.550	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	91	66.960	ENSMLUG00000027352	-	77	66.520	Myotis_lucifugus
ENSCHIG00000017396	ALYREF	97	97.683	ENSNLEG00000010313	ALYREF	97	97.674	Nomascus_leucogenys
ENSCHIG00000017396	ALYREF	79	73.934	ENSMEUG00000002210	ALYREF	92	73.934	Notamacropus_eugenii
ENSCHIG00000017396	ALYREF	51	90.370	ENSOPRG00000005551	-	52	88.148	Ochotona_princeps
ENSCHIG00000017396	ALYREF	97	96.552	ENSODEG00000008359	ALYREF	100	96.552	Octodon_degus
ENSCHIG00000017396	ALYREF	97	68.478	ENSORLG00000012331	ALYREF	100	69.203	Oryzias_latipes
ENSCHIG00000017396	ALYREF	74	89.447	ENSOGAG00000012409	ALYREF	76	93.370	Otolemur_garnettii
ENSCHIG00000017396	ALYREF	67	98.883	ENSOARG00000017932	ALYREF	67	98.883	Ovis_aries
ENSCHIG00000017396	ALYREF	97	98.837	ENSPPRG00000010829	ALYREF	98	98.837	Panthera_pardus
ENSCHIG00000017396	ALYREF	58	97.842	ENSPTIG00000006399	ALYREF	81	99.310	Panthera_tigris_altaica
ENSCHIG00000017396	ALYREF	97	97.683	ENSPTRG00000009774	ALYREF	97	97.674	Pan_troglodytes
ENSCHIG00000017396	ALYREF	97	97.287	ENSPANG00000019265	ALYREF	97	97.287	Papio_anubis
ENSCHIG00000017396	ALYREF	52	84.328	ENSPSIG00000017541	ALYREF	98	93.985	Pelodiscus_sinensis
ENSCHIG00000017396	ALYREF	97	97.287	ENSPPYG00000008749	ALYREF	97	97.287	Pongo_abelii
ENSCHIG00000017396	ALYREF	97	97.287	ENSPCOG00000020874	ALYREF	97	97.287	Propithecus_coquereli
ENSCHIG00000017396	ALYREF	97	80.233	ENSPVAG00000017866	ALYREF	100	80.233	Pteropus_vampyrus
ENSCHIG00000017396	ALYREF	64	98.256	ENSRNOG00000036687	Alyref	91	98.256	Rattus_norvegicus
ENSCHIG00000017396	ALYREF	67	95.506	ENSRBIG00000039651	ALYREF	72	95.506	Rhinopithecus_bieti
ENSCHIG00000017396	ALYREF	87	89.700	ENSRROG00000045364	ALYREF	83	95.283	Rhinopithecus_roxellana
ENSCHIG00000017396	ALYREF	72	92.784	ENSSHAG00000010459	ALYREF	95	94.595	Sarcophilus_harrisii
ENSCHIG00000017396	ALYREF	100	51.399	ENSSDUG00000003992	-	100	52.595	Seriola_dumerili
ENSCHIG00000017396	ALYREF	100	52.297	ENSSLDG00000005386	-	100	53.147	Seriola_lalandi_dorsalis
ENSCHIG00000017396	ALYREF	97	82.510	ENSSPUG00000004600	ALYREF	100	80.608	Sphenodon_punctatus
ENSCHIG00000017396	ALYREF	96	69.176	ENSSPAG00000011178	ALYREF	97	70.609	Stegastes_partitus
ENSCHIG00000017396	ALYREF	97	98.450	ENSSSCG00000032655	ALYREF	100	98.450	Sus_scrofa
ENSCHIG00000017396	ALYREF	52	85.714	ENSTGUG00000003513	ALYREF	98	93.939	Taeniopygia_guttata
ENSCHIG00000017396	ALYREF	97	68.864	ENSTRUG00000008828	ALYREF	100	68.015	Takifugu_rubripes
ENSCHIG00000017396	ALYREF	67	97.207	ENSTBEG00000005834	ALYREF	100	97.207	Tupaia_belangeri
ENSCHIG00000017396	ALYREF	97	97.287	ENSTTRG00000012275	ALYREF	100	97.287	Tursiops_truncatus
ENSCHIG00000017396	ALYREF	71	78.531	ENSUAMG00000016931	ALYREF	78	74.163	Ursus_americanus
ENSCHIG00000017396	ALYREF	71	78.531	ENSUMAG00000016384	ALYREF	78	74.163	Ursus_maritimus
ENSCHIG00000017396	ALYREF	97	74.157	ENSXETG00000005391	alyref	99	75.732	Xenopus_tropicalis