EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000017447 (Gene tree)
Gene ID: 102170843
Gene Symbol: SEPT1
Alias: DIFF6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 3560 bases
Position: chr25:26475228-26478787
Accession: 102170843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000017749	MMR_HSR1	PF01926.23	6.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000025561	SEPT1-201	1122	XM_005697703	ENSCHIP00000017749	373 (aa)	XP_005697760	UPI000D1907B9

Gene Model

Click here to download ENSCHIG00000017447's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000017447	SEPT1	90	49.558	ENSCHIG00000013805	SEPT7	79	48.023
ENSCHIG00000017447	SEPT1	81	43.750	ENSCHIG00000026942	SEPT9	52	43.750
ENSCHIG00000017447	SEPT1	92	40.974	ENSCHIG00000021075	SEPT11	82	40.217
ENSCHIG00000017447	SEPT1	80	47.157	ENSCHIG00000016257	SEPT3	81	47.157
ENSCHIG00000017447	SEPT1	92	39.886	ENSCHIG00000014012	SEPT8	66	42.424
ENSCHIG00000017447	SEPT1	94	55.271	ENSCHIG00000026614	SEPT2	94	55.707
ENSCHIG00000017447	SEPT1	81	44.079	ENSCHIG00000013270	SEPT12	84	44.079
ENSCHIG00000017447	SEPT1	93	60.057	ENSCHIG00000000129	-	85	60.399
ENSCHIG00000017447	SEPT1	97	63.912	ENSCHIG00000024623	SEPT4	74	63.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017447	SEPT1	100	94.133	ENSG00000180096	SEPT1	87	98.361	Homo_sapiens
ENSCHIG00000017447	SEPT1	99	92.533	ENSAMEG00000007865	SEPT1	99	92.533	Ailuropoda_melanoleuca
ENSCHIG00000017447	SEPT1	100	93.333	ENSANAG00000029084	SEPT1	100	93.333	Aotus_nancymaae
ENSCHIG00000017447	SEPT1	100	97.067	ENSBTAG00000021219	SEPT1	100	97.067	Bos_taurus
ENSCHIG00000017447	SEPT1	100	92.533	ENSCJAG00000002577	SEPT1	89	92.533	Callithrix_jacchus
ENSCHIG00000017447	SEPT1	99	93.850	ENSCAFG00000016576	SEPT1	99	93.850	Canis_familiaris
ENSCHIG00000017447	SEPT1	99	93.850	ENSCAFG00020017813	SEPT1	99	93.850	Canis_lupus_dingo
ENSCHIG00000017447	SEPT1	100	92.800	ENSTSYG00000035596	SEPT1	100	92.800	Carlito_syrichta
ENSCHIG00000017447	SEPT1	100	72.340	ENSCAPG00000001347	SEPT1	100	72.340	Cavia_aperea
ENSCHIG00000017447	SEPT1	99	90.133	ENSCPOG00000003088	SEPT1	99	90.133	Cavia_porcellus
ENSCHIG00000017447	SEPT1	100	79.733	ENSCCAG00000030164	SEPT1	90	79.733	Cebus_capucinus
ENSCHIG00000017447	SEPT1	100	93.867	ENSCATG00000037250	SEPT1	99	93.867	Cercocebus_atys
ENSCHIG00000017447	SEPT1	99	91.733	ENSCLAG00000010486	SEPT1	100	91.667	Chinchilla_lanigera
ENSCHIG00000017447	SEPT1	100	93.867	ENSCSAG00000006056	SEPT1	99	93.867	Chlorocebus_sabaeus
ENSCHIG00000017447	SEPT1	100	93.600	ENSCANG00000035786	SEPT1	89	93.600	Colobus_angolensis_palliatus
ENSCHIG00000017447	SEPT1	100	91.733	ENSCGRG00001003374	Sept1	100	91.733	Cricetulus_griseus_chok1gshd
ENSCHIG00000017447	SEPT1	100	90.933	ENSCGRG00000004919	Sept1	100	90.933	Cricetulus_griseus_crigri
ENSCHIG00000017447	SEPT1	100	92.533	ENSDNOG00000014680	SEPT1	85	92.533	Dasypus_novemcinctus
ENSCHIG00000017447	SEPT1	100	92.800	ENSDORG00000011443	Sept1	100	92.800	Dipodomys_ordii
ENSCHIG00000017447	SEPT1	92	93.372	ENSEASG00005013153	SEPT1	100	93.372	Equus_asinus_asinus
ENSCHIG00000017447	SEPT1	100	93.867	ENSECAG00000009390	SEPT1	96	93.867	Equus_caballus
ENSCHIG00000017447	SEPT1	100	91.733	ENSEEUG00000007661	SEPT1	100	91.733	Erinaceus_europaeus
ENSCHIG00000017447	SEPT1	100	93.333	ENSFCAG00000013541	SEPT1	94	93.333	Felis_catus
ENSCHIG00000017447	SEPT1	100	72.775	ENSGGOG00000017024	SEPT1	88	72.775	Gorilla_gorilla
ENSCHIG00000017447	SEPT1	100	94.133	ENSSTOG00000002782	SEPT1	100	94.133	Ictidomys_tridecemlineatus
ENSCHIG00000017447	SEPT1	100	91.467	ENSJJAG00000023131	Sept1	100	91.467	Jaculus_jaculus
ENSCHIG00000017447	SEPT1	99	91.711	ENSLAFG00000027789	SEPT1	99	91.711	Loxodonta_africana
ENSCHIG00000017447	SEPT1	100	93.867	ENSMFAG00000031504	SEPT1	89	93.867	Macaca_fascicularis
ENSCHIG00000017447	SEPT1	100	87.467	ENSMMUG00000021842	SEPT1	97	93.948	Macaca_mulatta
ENSCHIG00000017447	SEPT1	100	82.447	ENSMNEG00000041695	SEPT1	89	82.447	Macaca_nemestrina
ENSCHIG00000017447	SEPT1	100	85.333	ENSMLEG00000039481	SEPT1	88	85.333	Mandrillus_leucophaeus
ENSCHIG00000017447	SEPT1	100	92.800	ENSMAUG00000009531	Sept1	100	92.800	Mesocricetus_auratus
ENSCHIG00000017447	SEPT1	99	94.118	ENSMICG00000011817	SEPT1	94	94.118	Microcebus_murinus
ENSCHIG00000017447	SEPT1	100	92.000	ENSMOCG00000017518	Sept1	100	92.000	Microtus_ochrogaster
ENSCHIG00000017447	SEPT1	100	92.267	MGP_CAROLIEiJ_G0030492	Sept1	100	92.267	Mus_caroli
ENSCHIG00000017447	SEPT1	100	92.533	ENSMUSG00000000486	Sept1	100	92.533	Mus_musculus
ENSCHIG00000017447	SEPT1	100	92.267	MGP_PahariEiJ_G0013702	Sept1	100	92.267	Mus_pahari
ENSCHIG00000017447	SEPT1	100	92.267	MGP_SPRETEiJ_G0031606	Sept1	100	92.267	Mus_spretus
ENSCHIG00000017447	SEPT1	99	92.246	ENSMLUG00000006749	SEPT1	99	92.246	Myotis_lucifugus
ENSCHIG00000017447	SEPT1	100	92.533	ENSNGAG00000021368	Sept1	100	92.533	Nannospalax_galili
ENSCHIG00000017447	SEPT1	99	87.701	ENSMEUG00000000492	SEPT1	100	87.701	Notamacropus_eugenii
ENSCHIG00000017447	SEPT1	100	90.400	ENSOPRG00000007981	SEPT1	100	90.400	Ochotona_princeps
ENSCHIG00000017447	SEPT1	100	90.160	ENSODEG00000014531	SEPT1	100	90.160	Octodon_degus
ENSCHIG00000017447	SEPT1	100	85.333	ENSOANG00000005331	SEPT1	100	85.333	Ornithorhynchus_anatinus
ENSCHIG00000017447	SEPT1	99	94.652	ENSOGAG00000013350	SEPT1	99	94.652	Otolemur_garnettii
ENSCHIG00000017447	SEPT1	99	97.581	ENSOARG00000006135	SEPT1	99	97.581	Ovis_aries
ENSCHIG00000017447	SEPT1	85	98.276	ENSPPAG00000032680	SEPT1	87	71.733	Pan_paniscus
ENSCHIG00000017447	SEPT1	99	93.316	ENSPPRG00000008648	-	100	93.316	Panthera_pardus
ENSCHIG00000017447	SEPT1	84	92.722	ENSPTIG00000006718	SEPT1	87	92.722	Panthera_tigris_altaica
ENSCHIG00000017447	SEPT1	100	94.133	ENSPTRG00000007998	SEPT1	89	94.133	Pan_troglodytes
ENSCHIG00000017447	SEPT1	100	85.333	ENSPANG00000032364	SEPT1	99	85.333	Papio_anubis
ENSCHIG00000017447	SEPT1	100	92.267	ENSPEMG00000023616	Sept1	100	92.267	Peromyscus_maniculatus_bairdii
ENSCHIG00000017447	SEPT1	100	88.267	ENSPCIG00000001537	SEPT1	100	88.267	Phascolarctos_cinereus
ENSCHIG00000017447	SEPT1	84	92.722	ENSPPYG00000007270	-	100	92.722	Pongo_abelii
ENSCHIG00000017447	SEPT1	100	90.400	ENSPCAG00000009042	SEPT1	100	90.400	Procavia_capensis
ENSCHIG00000017447	SEPT1	100	94.133	ENSPCOG00000028121	SEPT1	90	94.133	Propithecus_coquereli
ENSCHIG00000017447	SEPT1	100	94.667	ENSPVAG00000008655	SEPT1	100	94.667	Pteropus_vampyrus
ENSCHIG00000017447	SEPT1	100	91.733	ENSRNOG00000017804	Sept1	100	91.733	Rattus_norvegicus
ENSCHIG00000017447	SEPT1	100	93.333	ENSRBIG00000036580	SEPT1	89	93.333	Rhinopithecus_bieti
ENSCHIG00000017447	SEPT1	100	93.333	ENSRROG00000038708	SEPT1	99	93.333	Rhinopithecus_roxellana
ENSCHIG00000017447	SEPT1	100	92.800	ENSSBOG00000021733	SEPT1	89	92.800	Saimiri_boliviensis_boliviensis
ENSCHIG00000017447	SEPT1	99	87.166	ENSSHAG00000006478	SEPT1	99	87.166	Sarcophilus_harrisii
ENSCHIG00000017447	SEPT1	100	94.400	ENSSSCG00000007800	SEPT1	100	94.400	Sus_scrofa
ENSCHIG00000017447	SEPT1	100	94.667	ENSTTRG00000017272	SEPT1	100	94.667	Tursiops_truncatus
ENSCHIG00000017447	SEPT1	100	94.667	ENSUAMG00000027438	SEPT1	99	94.400	Ursus_americanus
ENSCHIG00000017447	SEPT1	100	94.667	ENSUMAG00000011345	SEPT1	100	94.667	Ursus_maritimus
ENSCHIG00000017447	SEPT1	92	93.023	ENSVVUG00000026116	SEPT1	90	93.023	Vulpes_vulpes