EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000017606 (Gene tree)
Gene ID: 102182984
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 205382 bases
Position: chr13:69591203-69796584
Accession: 102182984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000018102	ResIII	PF04851.15	1.7e-07	1	1
ENSCHIP00000018084	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000025917	CHD6-202	8100	-	ENSCHIP00000018102	2699 (aa)	-	UPI000D194FBD
ENSCHIT00000025899	CHD6-201	12671	XM_018057882	ENSCHIP00000018084	2720 (aa)	XP_017913371	UPI000847543B

Gene Model

Click here to download ENSCHIG00000017606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017606's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000017606	CHD6	56	63.431	ENSCHIG00000026157	CHD8	56	65.360
ENSCHIG00000017606	CHD6	76	64.257	ENSCHIG00000021000	CHD9	69	66.239
ENSCHIG00000017606	CHD6	73	68.357	ENSCHIG00000011729	CHD7	71	65.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017606	CHD6	100	88.473	ENSG00000124177	CHD6	99	100.000	Homo_sapiens
ENSCHIG00000017606	CHD6	74	74.115	ENSAPOG00000013736	chd6	66	74.401	Acanthochromis_polyacanthus
ENSCHIG00000017606	CHD6	100	89.820	ENSAMEG00000009496	CHD6	100	89.820	Ailuropoda_melanoleuca
ENSCHIG00000017606	CHD6	72	75.663	ENSATEG00000005608	chd6	64	75.551	Anabas_testudineus
ENSCHIG00000017606	CHD6	99	70.882	ENSAPLG00000015592	CHD6	99	71.633	Anas_platyrhynchos
ENSCHIG00000017606	CHD6	99	66.508	ENSACAG00000006842	CHD6	99	67.118	Anolis_carolinensis
ENSCHIG00000017606	CHD6	100	88.106	ENSANAG00000037548	CHD6	99	93.578	Aotus_nancymaae
ENSCHIG00000017606	CHD6	81	73.176	ENSAMXG00000009576	chd6	75	72.698	Astyanax_mexicanus
ENSCHIG00000017606	CHD6	100	97.648	ENSBTAG00000005733	CHD6	100	97.648	Bos_taurus
ENSCHIG00000017606	CHD6	100	88.142	ENSCJAG00000017920	CHD6	99	93.394	Callithrix_jacchus
ENSCHIG00000017606	CHD6	100	89.489	ENSCAFG00000009236	CHD6	100	89.820	Canis_familiaris
ENSCHIG00000017606	CHD6	99	89.049	ENSCAFG00020012906	CHD6	99	96.309	Canis_lupus_dingo
ENSCHIG00000017606	CHD6	84	87.352	ENSTSYG00000014635	CHD6	100	87.352	Carlito_syrichta
ENSCHIG00000017606	CHD6	100	87.325	ENSCPOG00000015641	CHD6	100	87.325	Cavia_porcellus
ENSCHIG00000017606	CHD6	100	88.326	ENSCCAG00000036828	CHD6	99	93.578	Cebus_capucinus
ENSCHIG00000017606	CHD6	100	88.032	ENSCATG00000039248	CHD6	99	93.578	Cercocebus_atys
ENSCHIG00000017606	CHD6	100	87.060	ENSCLAG00000013743	CHD6	100	87.060	Chinchilla_lanigera
ENSCHIG00000017606	CHD6	100	88.399	ENSCSAG00000013997	CHD6	100	88.399	Chlorocebus_sabaeus
ENSCHIG00000017606	CHD6	91	88.538	ENSCHOG00000012647	CHD6	95	88.538	Choloepus_hoffmanni
ENSCHIG00000017606	CHD6	91	82.169	ENSCPBG00000019382	CHD6	99	73.003	Chrysemys_picta_bellii
ENSCHIG00000017606	CHD6	100	88.436	ENSCANG00000043435	CHD6	99	93.578	Colobus_angolensis_palliatus
ENSCHIG00000017606	CHD6	100	85.929	ENSCGRG00001002694	Chd6	100	85.819	Cricetulus_griseus_chok1gshd
ENSCHIG00000017606	CHD6	85	73.210	ENSDARG00000017244	chd6	80	73.210	Danio_rerio
ENSCHIG00000017606	CHD6	100	85.777	ENSDNOG00000004176	CHD6	99	86.436	Dasypus_novemcinctus
ENSCHIG00000017606	CHD6	99	89.759	ENSEASG00005023433	CHD6	95	97.876	Equus_asinus_asinus
ENSCHIG00000017606	CHD6	99	89.816	ENSECAG00000011761	CHD6	100	89.816	Equus_caballus
ENSCHIG00000017606	CHD6	70	79.800	ENSELUG00000012309	chd6	90	79.800	Esox_lucius
ENSCHIG00000017606	CHD6	100	89.563	ENSFCAG00000003572	CHD6	100	89.563	Felis_catus
ENSCHIG00000017606	CHD6	99	70.465	ENSFALG00000012563	CHD6	98	70.718	Ficedula_albicollis
ENSCHIG00000017606	CHD6	99	87.136	ENSFDAG00000013791	CHD6	99	87.136	Fukomys_damarensis
ENSCHIG00000017606	CHD6	71	70.282	ENSGMOG00000011715	chd6	84	71.290	Gadus_morhua
ENSCHIG00000017606	CHD6	78	71.438	ENSGACG00000000037	chd6	92	64.603	Gasterosteus_aculeatus
ENSCHIG00000017606	CHD6	100	88.510	ENSGGOG00000013123	CHD6	99	93.578	Gorilla_gorilla
ENSCHIG00000017606	CHD6	77	71.280	ENSHBUG00000014701	chd6	64	75.033	Haplochromis_burtoni
ENSCHIG00000017606	CHD6	100	86.926	ENSHGLG00000004548	CHD6	100	86.926	Heterocephalus_glaber_female
ENSCHIG00000017606	CHD6	100	86.926	ENSHGLG00100006401	CHD6	100	86.926	Heterocephalus_glaber_male
ENSCHIG00000017606	CHD6	77	77.135	ENSIPUG00000003692	chd6	79	71.601	Ictalurus_punctatus
ENSCHIG00000017606	CHD6	100	87.766	ENSSTOG00000013382	CHD6	100	87.766	Ictidomys_tridecemlineatus
ENSCHIG00000017606	CHD6	90	73.833	ENSLACG00000010881	CHD6	89	73.889	Latimeria_chalumnae
ENSCHIG00000017606	CHD6	69	80.232	ENSLOCG00000007386	chd6	79	75.362	Lepisosteus_oculatus
ENSCHIG00000017606	CHD6	100	87.954	ENSLAFG00000012144	CHD6	100	87.954	Loxodonta_africana
ENSCHIG00000017606	CHD6	100	88.436	ENSMFAG00000032830	CHD6	99	93.578	Macaca_fascicularis
ENSCHIG00000017606	CHD6	100	88.436	ENSMMUG00000020458	CHD6	99	93.578	Macaca_mulatta
ENSCHIG00000017606	CHD6	100	88.436	ENSMNEG00000040847	CHD6	99	93.578	Macaca_nemestrina
ENSCHIG00000017606	CHD6	100	88.041	ENSMLEG00000031965	CHD6	99	93.578	Mandrillus_leucophaeus
ENSCHIG00000017606	CHD6	69	73.921	ENSMAMG00000013111	chd6	64	75.535	Mastacembelus_armatus
ENSCHIG00000017606	CHD6	99	70.642	ENSMGAG00000001121	CHD6	99	71.303	Meleagris_gallopavo
ENSCHIG00000017606	CHD6	100	87.738	ENSMICG00000016641	CHD6	99	92.844	Microcebus_murinus
ENSCHIG00000017606	CHD6	89	78.539	ENSMODG00000000720	-	99	78.498	Monodelphis_domestica
ENSCHIG00000017606	CHD6	100	84.497	MGP_CAROLIEiJ_G0024604	Chd6	100	92.827	Mus_caroli
ENSCHIG00000017606	CHD6	100	84.680	ENSMUSG00000057133	Chd6	100	92.743	Mus_musculus
ENSCHIG00000017606	CHD6	100	84.533	MGP_PahariEiJ_G0026048	Chd6	100	93.080	Mus_pahari
ENSCHIG00000017606	CHD6	100	84.680	MGP_SPRETEiJ_G0025526	Chd6	100	92.827	Mus_spretus
ENSCHIG00000017606	CHD6	100	88.412	ENSMPUG00000017695	CHD6	100	88.376	Mustela_putorius_furo
ENSCHIG00000017606	CHD6	100	89.236	ENSMLUG00000016247	CHD6	100	89.236	Myotis_lucifugus
ENSCHIG00000017606	CHD6	75	73.979	ENSNBRG00000013839	chd6	82	70.836	Neolamprologus_brichardi
ENSCHIG00000017606	CHD6	100	86.794	ENSNLEG00000006496	CHD6	100	86.794	Nomascus_leucogenys
ENSCHIG00000017606	CHD6	100	84.460	ENSOPRG00000013376	-	100	84.460	Ochotona_princeps
ENSCHIG00000017606	CHD6	82	74.490	ENSONIG00000000393	chd6	86	74.554	Oreochromis_niloticus
ENSCHIG00000017606	CHD6	100	69.743	ENSOANG00000014347	CHD6	99	69.826	Ornithorhynchus_anatinus
ENSCHIG00000017606	CHD6	99	86.507	ENSOCUG00000012394	CHD6	100	86.507	Oryctolagus_cuniculus
ENSCHIG00000017606	CHD6	73	74.366	ENSORLG00020021891	chd6	95	85.972	Oryzias_latipes_hni
ENSCHIG00000017606	CHD6	99	87.103	ENSOGAG00000002427	CHD6	99	87.054	Otolemur_garnettii
ENSCHIG00000017606	CHD6	99	96.764	ENSOARG00000002597	CHD6	100	96.764	Ovis_aries
ENSCHIG00000017606	CHD6	100	89.599	ENSPPRG00000014756	CHD6	100	89.599	Panthera_pardus
ENSCHIG00000017606	CHD6	100	89.489	ENSPTIG00000011094	CHD6	100	89.489	Panthera_tigris_altaica
ENSCHIG00000017606	CHD6	100	88.546	ENSPTRG00000013504	CHD6	99	93.578	Pan_troglodytes
ENSCHIG00000017606	CHD6	100	88.363	ENSPANG00000025554	CHD6	99	93.394	Papio_anubis
ENSCHIG00000017606	CHD6	76	77.068	ENSPKIG00000005578	chd6	77	76.121	Paramormyrops_kingsleyae
ENSCHIG00000017606	CHD6	77	77.100	ENSPMGG00000014877	chd6	89	76.753	Periophthalmus_magnuspinnatus
ENSCHIG00000017606	CHD6	100	77.684	ENSPCIG00000028037	CHD6	100	78.124	Phascolarctos_cinereus
ENSCHIG00000017606	CHD6	74	71.704	ENSPLAG00000003128	chd6	62	74.467	Poecilia_latipinna
ENSCHIG00000017606	CHD6	72	75.037	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSCHIG00000017606	CHD6	100	88.734	ENSPPYG00000011016	CHD6	100	88.734	Pongo_abelii
ENSCHIG00000017606	CHD6	100	88.281	ENSPCOG00000001089	CHD6	99	93.394	Propithecus_coquereli
ENSCHIG00000017606	CHD6	77	74.984	ENSPNYG00000022516	chd6	82	71.865	Pundamilia_nyererei
ENSCHIG00000017606	CHD6	80	73.203	ENSPNAG00000012825	chd6	77	73.462	Pygocentrus_nattereri
ENSCHIG00000017606	CHD6	100	84.056	ENSRNOG00000016744	Chd6	100	83.872	Rattus_norvegicus
ENSCHIG00000017606	CHD6	100	88.363	ENSSBOG00000022089	CHD6	99	93.578	Saimiri_boliviensis_boliviensis
ENSCHIG00000017606	CHD6	100	77.154	ENSSHAG00000017072	CHD6	99	77.872	Sarcophilus_harrisii
ENSCHIG00000017606	CHD6	78	76.812	ENSSFOG00015012920	chd6	77	76.761	Scleropages_formosus
ENSCHIG00000017606	CHD6	59	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSCHIG00000017606	CHD6	100	90.665	ENSSSCG00000007360	CHD6	100	91.411	Sus_scrofa
ENSCHIG00000017606	CHD6	97	72.469	ENSTGUG00000003179	CHD6	99	72.696	Taeniopygia_guttata
ENSCHIG00000017606	CHD6	62	77.231	ENSTNIG00000017487	chd6	85	77.231	Tetraodon_nigroviridis
ENSCHIG00000017606	CHD6	100	89.273	ENSTTRG00000013438	CHD6	100	89.273	Tursiops_truncatus
ENSCHIG00000017606	CHD6	100	88.081	ENSUAMG00000024036	CHD6	95	96.332	Ursus_americanus
ENSCHIG00000017606	CHD6	99	89.886	ENSUMAG00000002017	CHD6	95	96.332	Ursus_maritimus
ENSCHIG00000017606	CHD6	92	91.943	ENSVPAG00000007941	CHD6	93	91.943	Vicugna_pacos
ENSCHIG00000017606	CHD6	100	89.746	ENSVVUG00000029164	CHD6	100	89.746	Vulpes_vulpes
ENSCHIG00000017606	CHD6	91	69.733	ENSXETG00000021445	chd6	89	69.610	Xenopus_tropicalis