EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000017927 (Gene tree)
Gene ID: 102183843
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 14741 bases
Position: chr25:3313166-3327906
Accession: 102183843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000018568	MMR_HSR1	PF01926.23	3.4e-08	1	1
ENSCHIP00000018565	MMR_HSR1	PF01926.23	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000026383	SRL-202	2406	XM_018040968	ENSCHIP00000018568	801 (aa)	XP_017896457	UPI000D18BD9A
ENSCHIT00000026380	SRL-201	2538	-	ENSCHIP00000018565	845 (aa)	-	UPI000D18DC84

Gene Model

Click here to download ENSCHIG00000017927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017927's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017927	SRL	56	96.239	ENSG00000185739	SRL	99	96.744	Homo_sapiens
ENSCHIG00000017927	SRL	57	82.637	ENSAPOG00000018093	srl	99	83.521	Acanthochromis_polyacanthus
ENSCHIG00000017927	SRL	55	75.510	ENSAPOG00000012432	SRL	98	73.991	Acanthochromis_polyacanthus
ENSCHIG00000017927	SRL	98	95.106	ENSAMEG00000010862	SRL	81	97.577	Ailuropoda_melanoleuca
ENSCHIG00000017927	SRL	56	83.407	ENSACIG00000015799	srl	99	83.407	Amphilophus_citrinellus
ENSCHIG00000017927	SRL	55	74.944	ENSACIG00000015419	SRL	99	74.944	Amphilophus_citrinellus
ENSCHIG00000017927	SRL	55	75.113	ENSAOCG00000017049	SRL	96	75.113	Amphiprion_ocellaris
ENSCHIG00000017927	SRL	54	84.491	ENSAOCG00000007574	srl	99	84.491	Amphiprion_ocellaris
ENSCHIG00000017927	SRL	57	82.857	ENSAPEG00000006911	srl	99	81.545	Amphiprion_percula
ENSCHIG00000017927	SRL	55	71.882	ENSAPEG00000006533	SRL	96	71.429	Amphiprion_percula
ENSCHIG00000017927	SRL	55	72.907	ENSATEG00000009643	SRL	52	72.907	Anabas_testudineus
ENSCHIG00000017927	SRL	55	84.127	ENSATEG00000024315	srl	99	81.034	Anabas_testudineus
ENSCHIG00000017927	SRL	55	89.602	ENSACAG00000016380	SRL	99	79.705	Anolis_carolinensis
ENSCHIG00000017927	SRL	55	72.467	ENSACLG00000024674	SRL	56	72.467	Astatotilapia_calliptera
ENSCHIG00000017927	SRL	57	82.637	ENSACLG00000027685	srl	98	83.073	Astatotilapia_calliptera
ENSCHIG00000017927	SRL	52	77.590	ENSAMXG00000038693	SRL	99	73.230	Astyanax_mexicanus
ENSCHIG00000017927	SRL	55	83.559	ENSAMXG00000018789	srl	89	82.456	Astyanax_mexicanus
ENSCHIG00000017927	SRL	99	94.493	ENSBTAG00000001078	SRL	99	94.493	Bos_taurus
ENSCHIG00000017927	SRL	56	96.460	ENSCJAG00000019750	SRL	97	95.870	Callithrix_jacchus
ENSCHIG00000017927	SRL	98	70.767	ENSCAFG00000019233	SRL	85	97.363	Canis_familiaris
ENSCHIG00000017927	SRL	98	74.938	ENSCAFG00020025024	SRL	98	75.866	Canis_lupus_dingo
ENSCHIG00000017927	SRL	56	97.124	ENSTSYG00000007919	SRL	99	97.442	Carlito_syrichta
ENSCHIG00000017927	SRL	57	97.130	ENSCPOG00000012643	SRL	99	95.914	Cavia_porcellus
ENSCHIG00000017927	SRL	55	90.498	ENSCCAG00000032646	SRL	99	96.825	Cebus_capucinus
ENSCHIG00000017927	SRL	98	79.538	ENSCATG00000032227	-	97	95.652	Cercocebus_atys
ENSCHIG00000017927	SRL	57	96.909	ENSCLAG00000016242	SRL	99	95.699	Chinchilla_lanigera
ENSCHIG00000017927	SRL	98	83.216	ENSCSAG00000009635	-	78	94.280	Chlorocebus_sabaeus
ENSCHIG00000017927	SRL	74	95.855	ENSCHOG00000001618	SRL	84	95.855	Choloepus_hoffmanni
ENSCHIG00000017927	SRL	80	92.288	ENSCPBG00000026371	SRL	99	87.265	Chrysemys_picta_bellii
ENSCHIG00000017927	SRL	55	58.145	ENSCING00000005231	-	91	61.084	Ciona_intestinalis
ENSCHIG00000017927	SRL	56	96.239	ENSCANG00000035872	SRL	99	96.744	Colobus_angolensis_palliatus
ENSCHIG00000017927	SRL	98	70.141	ENSCGRG00001016630	Srl	99	94.624	Cricetulus_griseus_chok1gshd
ENSCHIG00000017927	SRL	98	70.141	ENSCGRG00000005458	Srl	99	94.624	Cricetulus_griseus_crigri
ENSCHIG00000017927	SRL	55	72.398	ENSCSEG00000011866	SRL	93	70.410	Cynoglossus_semilaevis
ENSCHIG00000017927	SRL	57	82.781	ENSCSEG00000016151	srl	97	82.533	Cynoglossus_semilaevis
ENSCHIG00000017927	SRL	81	58.728	ENSCVAG00000022465	SRL	60	74.279	Cyprinodon_variegatus
ENSCHIG00000017927	SRL	55	84.127	ENSCVAG00000003513	srl	98	81.838	Cyprinodon_variegatus
ENSCHIG00000017927	SRL	56	84.479	ENSDARG00000104587	srl	99	82.441	Danio_rerio
ENSCHIG00000017927	SRL	99	71.581	ENSDNOG00000011643	SRL	54	96.247	Dasypus_novemcinctus
ENSCHIG00000017927	SRL	57	95.824	ENSDORG00000014807	Srl	99	95.054	Dipodomys_ordii
ENSCHIG00000017927	SRL	99	75.663	ENSEASG00005000942	SRL	99	74.221	Equus_asinus_asinus
ENSCHIG00000017927	SRL	99	71.841	ENSECAG00000024219	SRL	99	95.106	Equus_caballus
ENSCHIG00000017927	SRL	57	79.787	ENSELUG00000015616	srl	98	78.870	Esox_lucius
ENSCHIG00000017927	SRL	99	74.584	ENSFCAG00000022075	SRL	99	95.096	Felis_catus
ENSCHIG00000017927	SRL	57	90.529	ENSFALG00000004328	SRL	65	90.351	Ficedula_albicollis
ENSCHIG00000017927	SRL	57	96.044	ENSFDAG00000006199	SRL	99	95.054	Fukomys_damarensis
ENSCHIG00000017927	SRL	55	82.993	ENSFHEG00000011239	srl	99	79.443	Fundulus_heteroclitus
ENSCHIG00000017927	SRL	55	75.737	ENSFHEG00000011854	SRL	98	76.190	Fundulus_heteroclitus
ENSCHIG00000017927	SRL	55	81.015	ENSGMOG00000014954	srl	99	81.015	Gadus_morhua
ENSCHIG00000017927	SRL	57	90.330	ENSGALG00000038884	SRL	99	88.723	Gallus_gallus
ENSCHIG00000017927	SRL	55	76.190	ENSGAFG00000016984	SRL	98	75.737	Gambusia_affinis
ENSCHIG00000017927	SRL	57	82.119	ENSGAFG00000000010	srl	99	81.699	Gambusia_affinis
ENSCHIG00000017927	SRL	55	81.015	ENSGACG00000011332	srl	99	81.015	Gasterosteus_aculeatus
ENSCHIG00000017927	SRL	99	67.570	ENSGGOG00000011312	-	97	95.435	Gorilla_gorilla
ENSCHIG00000017927	SRL	57	82.637	ENSHBUG00000007581	srl	98	83.073	Haplochromis_burtoni
ENSCHIG00000017927	SRL	55	72.247	ENSHBUG00000015710	SRL	56	72.247	Haplochromis_burtoni
ENSCHIG00000017927	SRL	57	96.909	ENSHGLG00000015271	SRL	99	95.699	Heterocephalus_glaber_female
ENSCHIG00000017927	SRL	57	96.909	ENSHGLG00100019378	SRL	99	95.699	Heterocephalus_glaber_male
ENSCHIG00000017927	SRL	60	68.623	ENSHCOG00000001012	SRL	50	71.018	Hippocampus_comes
ENSCHIG00000017927	SRL	57	82.637	ENSHCOG00000008687	srl	98	84.127	Hippocampus_comes
ENSCHIG00000017927	SRL	54	70.183	ENSIPUG00000011609	SRL	89	71.990	Ictalurus_punctatus
ENSCHIG00000017927	SRL	57	81.099	ENSIPUG00000012513	srl	98	80.828	Ictalurus_punctatus
ENSCHIG00000017927	SRL	98	67.686	ENSSTOG00000021151	-	99	95.484	Ictidomys_tridecemlineatus
ENSCHIG00000017927	SRL	57	96.468	ENSJJAG00000016400	Srl	99	95.269	Jaculus_jaculus
ENSCHIG00000017927	SRL	55	75.682	ENSKMAG00000019537	SRL	99	75.682	Kryptolebias_marmoratus
ENSCHIG00000017927	SRL	55	83.258	ENSKMAG00000014115	srl	93	85.714	Kryptolebias_marmoratus
ENSCHIG00000017927	SRL	56	82.483	ENSLBEG00000026643	srl	99	80.603	Labrus_bergylta
ENSCHIG00000017927	SRL	55	75.283	ENSLBEG00000013811	SRL	99	73.261	Labrus_bergylta
ENSCHIG00000017927	SRL	56	85.177	ENSLACG00000002825	SRL	99	85.177	Latimeria_chalumnae
ENSCHIG00000017927	SRL	56	84.513	ENSLOCG00000002644	srl	97	84.061	Lepisosteus_oculatus
ENSCHIG00000017927	SRL	98	72.633	ENSLAFG00000006329	SRL	97	70.198	Loxodonta_africana
ENSCHIG00000017927	SRL	54	96.744	ENSMFAG00000037383	SRL	99	96.744	Macaca_fascicularis
ENSCHIG00000017927	SRL	98	82.639	ENSMNEG00000019236	-	98	95.238	Macaca_nemestrina
ENSCHIG00000017927	SRL	56	88.053	ENSMLEG00000032156	SRL	97	87.609	Mandrillus_leucophaeus
ENSCHIG00000017927	SRL	55	72.848	ENSMAMG00000013756	SRL	53	72.747	Mastacembelus_armatus
ENSCHIG00000017927	SRL	55	83.900	ENSMAMG00000023322	srl	99	80.171	Mastacembelus_armatus
ENSCHIG00000017927	SRL	57	82.637	ENSMZEG00005004548	srl	98	83.073	Maylandia_zebra
ENSCHIG00000017927	SRL	55	72.467	ENSMZEG00005004010	SRL	57	72.467	Maylandia_zebra
ENSCHIG00000017927	SRL	57	90.175	ENSMGAG00000009342	SRL	95	92.308	Meleagris_gallopavo
ENSCHIG00000017927	SRL	98	74.244	ENSMICG00000032307	SRL	99	94.206	Microcebus_murinus
ENSCHIG00000017927	SRL	57	95.585	ENSMOCG00000008208	Srl	99	94.409	Microtus_ochrogaster
ENSCHIG00000017927	SRL	55	72.247	ENSMMOG00000021572	SRL	99	72.247	Mola_mola
ENSCHIG00000017927	SRL	55	83.220	ENSMMOG00000013970	srl	98	83.220	Mola_mola
ENSCHIG00000017927	SRL	98	63.503	ENSMODG00000016380	-	67	95.032	Monodelphis_domestica
ENSCHIG00000017927	SRL	52	75.422	ENSMALG00000000670	SRL	97	74.458	Monopterus_albus
ENSCHIG00000017927	SRL	55	83.447	ENSMALG00000005039	srl	98	83.447	Monopterus_albus
ENSCHIG00000017927	SRL	98	67.562	MGP_CAROLIEiJ_G0020400	Srl	99	95.054	Mus_caroli
ENSCHIG00000017927	SRL	98	67.299	ENSMUSG00000022519	Srl	99	95.054	Mus_musculus
ENSCHIG00000017927	SRL	98	64.829	MGP_PahariEiJ_G0016108	Srl	78	94.255	Mus_pahari
ENSCHIG00000017927	SRL	98	67.522	MGP_SPRETEiJ_G0021294	Srl	99	95.054	Mus_spretus
ENSCHIG00000017927	SRL	99	76.562	ENSMPUG00000015025	SRL	99	73.850	Mustela_putorius_furo
ENSCHIG00000017927	SRL	98	75.971	ENSMLUG00000030733	SRL	99	72.235	Myotis_lucifugus
ENSCHIG00000017927	SRL	57	96.026	ENSNGAG00000019741	Srl	99	94.839	Nannospalax_galili
ENSCHIG00000017927	SRL	57	82.637	ENSNBRG00000023775	srl	98	82.213	Neolamprologus_brichardi
ENSCHIG00000017927	SRL	79	56.031	ENSNBRG00000002422	SRL	62	68.277	Neolamprologus_brichardi
ENSCHIG00000017927	SRL	56	89.357	ENSNLEG00000029051	SRL	97	88.478	Nomascus_leucogenys
ENSCHIG00000017927	SRL	99	66.472	ENSOPRG00000000477	-	54	89.497	Ochotona_princeps
ENSCHIG00000017927	SRL	57	96.026	ENSODEG00000013256	SRL	99	94.839	Octodon_degus
ENSCHIG00000017927	SRL	57	82.159	ENSONIG00000005192	srl	97	82.057	Oreochromis_niloticus
ENSCHIG00000017927	SRL	99	67.624	ENSOCUG00000025140	SRL	81	94.915	Oryctolagus_cuniculus
ENSCHIG00000017927	SRL	57	81.898	ENSORLG00000008291	srl	91	86.269	Oryzias_latipes
ENSCHIG00000017927	SRL	55	74.944	ENSORLG00000015064	SRL	97	74.944	Oryzias_latipes
ENSCHIG00000017927	SRL	57	81.678	ENSORLG00020019784	srl	79	86.010	Oryzias_latipes_hni
ENSCHIG00000017927	SRL	55	75.169	ENSORLG00020018173	SRL	97	75.169	Oryzias_latipes_hni
ENSCHIG00000017927	SRL	57	81.236	ENSORLG00015009342	srl	94	81.004	Oryzias_latipes_hsok
ENSCHIG00000017927	SRL	55	75.395	ENSORLG00015019063	SRL	97	75.395	Oryzias_latipes_hsok
ENSCHIG00000017927	SRL	57	81.898	ENSOMEG00000010006	srl	97	83.371	Oryzias_melastigma
ENSCHIG00000017927	SRL	55	73.348	ENSOMEG00000005682	SRL	53	72.926	Oryzias_melastigma
ENSCHIG00000017927	SRL	98	73.141	ENSOGAG00000029266	SRL	57	94.218	Otolemur_garnettii
ENSCHIG00000017927	SRL	57	99.780	ENSOARG00000003074	SRL	57	99.780	Ovis_aries
ENSCHIG00000017927	SRL	98	67.500	ENSPPAG00000024919	-	99	96.744	Pan_paniscus
ENSCHIG00000017927	SRL	56	97.566	ENSPPRG00000010274	SRL	99	98.140	Panthera_pardus
ENSCHIG00000017927	SRL	56	97.566	ENSPTIG00000015162	SRL	99	98.140	Panthera_tigris_altaica
ENSCHIG00000017927	SRL	98	67.609	ENSPTRG00000007712	SRL	99	96.744	Pan_troglodytes
ENSCHIG00000017927	SRL	57	96.035	ENSPANG00000013804	SRL	99	95.455	Papio_anubis
ENSCHIG00000017927	SRL	55	76.644	ENSPKIG00000024974	SRL	99	70.423	Paramormyrops_kingsleyae
ENSCHIG00000017927	SRL	57	82.895	ENSPKIG00000006405	srl	99	80.810	Paramormyrops_kingsleyae
ENSCHIG00000017927	SRL	98	59.798	ENSPSIG00000008586	SRL	52	88.865	Pelodiscus_sinensis
ENSCHIG00000017927	SRL	55	72.562	ENSPMGG00000023505	-	99	71.847	Periophthalmus_magnuspinnatus
ENSCHIG00000017927	SRL	56	83.592	ENSPMGG00000021081	srl	97	83.592	Periophthalmus_magnuspinnatus
ENSCHIG00000017927	SRL	57	96.026	ENSPEMG00000015842	Srl	99	94.839	Peromyscus_maniculatus_bairdii
ENSCHIG00000017927	SRL	53	68.421	ENSPMAG00000004786	srl	100	67.506	Petromyzon_marinus
ENSCHIG00000017927	SRL	57	96.247	ENSPCIG00000012128	SRL	99	96.256	Phascolarctos_cinereus
ENSCHIG00000017927	SRL	57	80.000	ENSPFOG00000011408	srl	96	79.915	Poecilia_formosa
ENSCHIG00000017927	SRL	57	81.579	ENSPLAG00000008017	srl	99	81.481	Poecilia_latipinna
ENSCHIG00000017927	SRL	55	75.283	ENSPLAG00000002932	SRL	98	74.150	Poecilia_latipinna
ENSCHIG00000017927	SRL	59	70.000	ENSPMEG00000005890	SRL	63	70.393	Poecilia_mexicana
ENSCHIG00000017927	SRL	57	81.898	ENSPMEG00000006745	srl	99	81.481	Poecilia_mexicana
ENSCHIG00000017927	SRL	57	82.119	ENSPREG00000007751	srl	98	83.108	Poecilia_reticulata
ENSCHIG00000017927	SRL	55	76.417	ENSPREG00000000315	SRL	98	75.283	Poecilia_reticulata
ENSCHIG00000017927	SRL	52	97.362	ENSPPYG00000007053	SRL	97	97.362	Pongo_abelii
ENSCHIG00000017927	SRL	85	92.324	ENSPCAG00000003378	-	84	92.276	Procavia_capensis
ENSCHIG00000017927	SRL	56	95.354	ENSPCOG00000023135	SRL	99	96.279	Propithecus_coquereli
ENSCHIG00000017927	SRL	99	75.151	ENSPVAG00000006586	SRL	58	95.957	Pteropus_vampyrus
ENSCHIG00000017927	SRL	55	72.467	ENSPNYG00000003423	SRL	56	72.467	Pundamilia_nyererei
ENSCHIG00000017927	SRL	57	82.637	ENSPNYG00000001200	srl	98	83.073	Pundamilia_nyererei
ENSCHIG00000017927	SRL	55	82.207	ENSPNAG00000023106	srl	99	79.443	Pygocentrus_nattereri
ENSCHIG00000017927	SRL	55	75.510	ENSPNAG00000007361	-	91	75.510	Pygocentrus_nattereri
ENSCHIG00000017927	SRL	98	66.029	ENSRNOG00000005269	Srl	79	95.106	Rattus_norvegicus
ENSCHIG00000017927	SRL	98	69.809	ENSRBIG00000042358	SRL	85	94.280	Rhinopithecus_bieti
ENSCHIG00000017927	SRL	98	70.905	ENSSBOG00000029273	SRL	97	95.870	Saimiri_boliviensis_boliviensis
ENSCHIG00000017927	SRL	89	96.044	ENSSHAG00000011715	-	73	95.186	Sarcophilus_harrisii
ENSCHIG00000017927	SRL	55	77.324	ENSSFOG00015021327	SRL	51	76.211	Scleropages_formosus
ENSCHIG00000017927	SRL	55	84.354	ENSSFOG00015009773	srl	97	82.895	Scleropages_formosus
ENSCHIG00000017927	SRL	56	82.851	ENSSMAG00000016274	srl	98	82.851	Scophthalmus_maximus
ENSCHIG00000017927	SRL	55	72.807	ENSSMAG00000002232	SRL	50	71.806	Scophthalmus_maximus
ENSCHIG00000017927	SRL	55	83.900	ENSSDUG00000010808	srl	97	83.900	Seriola_dumerili
ENSCHIG00000017927	SRL	55	74.107	ENSSDUG00000009161	SRL	98	74.107	Seriola_dumerili
ENSCHIG00000017927	SRL	55	73.684	ENSSLDG00000014601	SRL	99	73.684	Seriola_lalandi_dorsalis
ENSCHIG00000017927	SRL	57	82.340	ENSSLDG00000022024	srl	97	82.096	Seriola_lalandi_dorsalis
ENSCHIG00000017927	SRL	56	90.287	ENSSPUG00000016859	SRL	99	90.308	Sphenodon_punctatus
ENSCHIG00000017927	SRL	55	84.580	ENSSPAG00000019105	srl	97	82.609	Stegastes_partitus
ENSCHIG00000017927	SRL	55	75.227	ENSSPAG00000014254	SRL	98	74.091	Stegastes_partitus
ENSCHIG00000017927	SRL	99	79.106	ENSSSCG00000007949	SRL	100	97.773	Sus_scrofa
ENSCHIG00000017927	SRL	57	90.508	ENSTGUG00000003951	-	99	90.529	Taeniopygia_guttata
ENSCHIG00000017927	SRL	57	82.119	ENSTRUG00000006005	srl	97	81.878	Takifugu_rubripes
ENSCHIG00000017927	SRL	52	75.721	ENSTRUG00000013310	SRL	54	75.481	Takifugu_rubripes
ENSCHIG00000017927	SRL	57	81.898	ENSTNIG00000009739	srl	97	81.441	Tetraodon_nigroviridis
ENSCHIG00000017927	SRL	76	98.182	ENSTTRG00000002709	-	68	98.182	Tursiops_truncatus
ENSCHIG00000017927	SRL	99	76.034	ENSUAMG00000005701	SRL	99	74.787	Ursus_americanus
ENSCHIG00000017927	SRL	82	79.173	ENSUMAG00000002574	SRL	99	74.696	Ursus_maritimus
ENSCHIG00000017927	SRL	98	74.969	ENSVVUG00000016331	-	87	75.682	Vulpes_vulpes
ENSCHIG00000017927	SRL	56	88.027	ENSXETG00000017313	srl	99	88.027	Xenopus_tropicalis
ENSCHIG00000017927	SRL	55	75.737	ENSXCOG00000014584	SRL	99	74.222	Xiphophorus_couchianus
ENSCHIG00000017927	SRL	52	85.714	ENSXCOG00000010424	srl	96	85.714	Xiphophorus_couchianus
ENSCHIG00000017927	SRL	57	82.561	ENSXMAG00000004625	srl	93	82.096	Xiphophorus_maculatus
ENSCHIG00000017927	SRL	59	70.287	ENSXMAG00000027598	SRL	65	71.849	Xiphophorus_maculatus