EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000017954 (Gene tree)
Gene ID: 102180252
Gene Symbol: -
Alias: -
Full Name: UTP6%2C small subunit processome component
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 25471 bases
Position: chr19:17876452-17901922
Accession: 102180252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000018642	U3_assoc_6	PF08640.11	8.3e-23	1	1
ENSCHIP00000018634	U3_assoc_6	PF08640.11	8.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000026457	-	1764	-	ENSCHIP00000018642	587 (aa)	-	UPI000D1911AB
ENSCHIT00000026449	-	1797	XM_005693233	ENSCHIP00000018634	598 (aa)	XP_005693290	UPI0008469F08

Gene Model

Click here to download ENSCHIG00000017954's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000017954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000017954	-	100	99.833	ENSCHIG00000009726	-	100	99.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000017954	-	100	75.084	ENSG00000108651	UTP6	100	75.084	Homo_sapiens
ENSCHIG00000017954	-	100	53.344	ENSAPOG00000000435	utp6	100	53.344	Acanthochromis_polyacanthus
ENSCHIG00000017954	-	99	75.671	ENSAMEG00000005443	UTP6	99	75.671	Ailuropoda_melanoleuca
ENSCHIG00000017954	-	100	50.502	ENSACIG00000004124	utp6	100	50.502	Amphilophus_citrinellus
ENSCHIG00000017954	-	100	53.177	ENSAOCG00000016812	utp6	100	53.177	Amphiprion_ocellaris
ENSCHIG00000017954	-	100	53.512	ENSAPEG00000023565	utp6	100	53.512	Amphiprion_percula
ENSCHIG00000017954	-	100	53.010	ENSATEG00000003401	utp6	100	53.010	Anabas_testudineus
ENSCHIG00000017954	-	99	59.661	ENSAPLG00000005821	UTP6	99	59.661	Anas_platyrhynchos
ENSCHIG00000017954	-	100	59.866	ENSACAG00000009472	UTP6	100	59.866	Anolis_carolinensis
ENSCHIG00000017954	-	100	75.251	ENSANAG00000034603	UTP6	100	75.251	Aotus_nancymaae
ENSCHIG00000017954	-	100	53.010	ENSACLG00000006728	utp6	100	53.010	Astatotilapia_calliptera
ENSCHIG00000017954	-	100	53.344	ENSAMXG00000009478	utp6	100	53.344	Astyanax_mexicanus
ENSCHIG00000017954	-	100	93.478	ENSBTAG00000015612	UTP6	100	93.478	Bos_taurus
ENSCHIG00000017954	-	100	90.970	ENSBTAG00000003769	-	98	90.970	Bos_taurus
ENSCHIG00000017954	-	100	74.749	ENSCJAG00000014115	UTP6	100	74.749	Callithrix_jacchus
ENSCHIG00000017954	-	100	76.254	ENSCAFG00000018507	UTP6	100	76.254	Canis_familiaris
ENSCHIG00000017954	-	100	76.254	ENSCAFG00020014678	UTP6	100	76.254	Canis_lupus_dingo
ENSCHIG00000017954	-	99	71.477	ENSTSYG00000002202	UTP6	99	71.477	Carlito_syrichta
ENSCHIG00000017954	-	89	64.728	ENSCAPG00000017595	UTP6	96	64.728	Cavia_aperea
ENSCHIG00000017954	-	99	75.336	ENSCPOG00000014294	UTP6	99	75.336	Cavia_porcellus
ENSCHIG00000017954	-	100	70.628	ENSCCAG00000033318	-	100	70.628	Cebus_capucinus
ENSCHIG00000017954	-	100	74.415	ENSCATG00000034868	UTP6	100	74.415	Cercocebus_atys
ENSCHIG00000017954	-	99	75.336	ENSCLAG00000007274	UTP6	99	75.336	Chinchilla_lanigera
ENSCHIG00000017954	-	100	74.415	ENSCSAG00000006595	UTP6	100	74.415	Chlorocebus_sabaeus
ENSCHIG00000017954	-	88	55.797	ENSCHOG00000010940	-	88	55.797	Choloepus_hoffmanni
ENSCHIG00000017954	-	100	63.712	ENSCPBG00000004652	UTP6	100	63.712	Chrysemys_picta_bellii
ENSCHIG00000017954	-	99	30.945	ENSCING00000022947	-	99	30.945	Ciona_intestinalis
ENSCHIG00000017954	-	54	37.838	ENSCSAVG00000011416	-	100	37.838	Ciona_savignyi
ENSCHIG00000017954	-	88	56.489	ENSCANG00000031141	UTP6	90	57.310	Colobus_angolensis_palliatus
ENSCHIG00000017954	-	99	75.000	ENSCGRG00001000046	Utp6	99	75.000	Cricetulus_griseus_chok1gshd
ENSCHIG00000017954	-	94	74.867	ENSCGRG00000011543	Utp6	99	74.867	Cricetulus_griseus_crigri
ENSCHIG00000017954	-	100	49.752	ENSCSEG00000013422	utp6	100	55.556	Cynoglossus_semilaevis
ENSCHIG00000017954	-	100	53.167	ENSCVAG00000020322	utp6	100	53.167	Cyprinodon_variegatus
ENSCHIG00000017954	-	100	50.502	ENSDARG00000098433	utp6	100	60.221	Danio_rerio
ENSCHIG00000017954	-	100	76.589	ENSDNOG00000037018	UTP6	100	76.589	Dasypus_novemcinctus
ENSCHIG00000017954	-	91	71.795	ENSDORG00000003843	Utp6	100	71.795	Dipodomys_ordii
ENSCHIG00000017954	-	100	76.589	ENSEASG00005010870	UTP6	100	76.589	Equus_asinus_asinus
ENSCHIG00000017954	-	100	76.421	ENSECAG00000022217	UTP6	100	76.421	Equus_caballus
ENSCHIG00000017954	-	100	52.174	ENSELUG00000006618	utp6	100	52.174	Esox_lucius
ENSCHIG00000017954	-	100	74.624	ENSFCAG00000015795	UTP6	100	74.624	Felis_catus
ENSCHIG00000017954	-	100	59.699	ENSFALG00000002282	UTP6	100	59.699	Ficedula_albicollis
ENSCHIG00000017954	-	99	73.826	ENSFDAG00000019506	UTP6	99	73.826	Fukomys_damarensis
ENSCHIG00000017954	-	100	52.508	ENSFHEG00000010373	utp6	100	52.508	Fundulus_heteroclitus
ENSCHIG00000017954	-	100	51.672	ENSGMOG00000011958	utp6	100	51.672	Gadus_morhua
ENSCHIG00000017954	-	100	59.866	ENSGALG00000003260	UTP6	100	59.866	Gallus_gallus
ENSCHIG00000017954	-	100	52.833	ENSGAFG00000008505	utp6	100	52.833	Gambusia_affinis
ENSCHIG00000017954	-	100	54.013	ENSGACG00000019424	utp6	100	54.013	Gasterosteus_aculeatus
ENSCHIG00000017954	-	100	61.706	ENSGAGG00000004820	UTP6	100	61.706	Gopherus_agassizii
ENSCHIG00000017954	-	100	60.368	ENSGGOG00000026003	-	100	60.368	Gorilla_gorilla
ENSCHIG00000017954	-	100	74.916	ENSGGOG00000013569	UTP6	100	74.916	Gorilla_gorilla
ENSCHIG00000017954	-	100	53.010	ENSHBUG00000018668	utp6	100	53.010	Haplochromis_burtoni
ENSCHIG00000017954	-	99	73.490	ENSHGLG00000010332	UTP6	99	73.490	Heterocephalus_glaber_female
ENSCHIG00000017954	-	99	67.622	ENSHGLG00000008642	-	99	67.622	Heterocephalus_glaber_female
ENSCHIG00000017954	-	95	68.717	ENSHGLG00100006047	-	99	68.717	Heterocephalus_glaber_male
ENSCHIG00000017954	-	99	71.111	ENSHGLG00100014271	-	99	71.111	Heterocephalus_glaber_male
ENSCHIG00000017954	-	100	52.174	ENSHCOG00000017277	utp6	100	52.174	Hippocampus_comes
ENSCHIG00000017954	-	100	52.755	ENSIPUG00000022587	Utp6	100	52.755	Ictalurus_punctatus
ENSCHIG00000017954	-	99	76.007	ENSSTOG00000015875	UTP6	99	76.007	Ictidomys_tridecemlineatus
ENSCHIG00000017954	-	100	53.010	ENSKMAG00000021631	utp6	100	53.010	Kryptolebias_marmoratus
ENSCHIG00000017954	-	100	53.177	ENSLBEG00000002115	utp6	100	53.177	Labrus_bergylta
ENSCHIG00000017954	-	100	58.863	ENSLACG00000017158	UTP6	100	58.863	Latimeria_chalumnae
ENSCHIG00000017954	-	91	54.762	ENSLOCG00000013797	utp6	90	54.762	Lepisosteus_oculatus
ENSCHIG00000017954	-	100	77.090	ENSLAFG00000013008	UTP6	100	77.090	Loxodonta_africana
ENSCHIG00000017954	-	91	58.577	ENSMFAG00000041904	-	100	52.833	Macaca_fascicularis
ENSCHIG00000017954	-	100	74.749	ENSMFAG00000038842	UTP6	100	74.749	Macaca_fascicularis
ENSCHIG00000017954	-	100	74.749	ENSMMUG00000020403	UTP6	100	74.749	Macaca_mulatta
ENSCHIG00000017954	-	100	74.749	ENSMNEG00000039480	UTP6	100	74.749	Macaca_nemestrina
ENSCHIG00000017954	-	100	64.548	ENSMLEG00000032174	UTP6	100	64.548	Mandrillus_leucophaeus
ENSCHIG00000017954	-	99	58.754	ENSMLEG00000039364	-	99	58.754	Mandrillus_leucophaeus
ENSCHIG00000017954	-	100	53.010	ENSMAMG00000002228	utp6	99	53.010	Mastacembelus_armatus
ENSCHIG00000017954	-	100	53.010	ENSMZEG00005023895	utp6	100	53.010	Maylandia_zebra
ENSCHIG00000017954	-	95	60.105	ENSMGAG00000008111	UTP6	100	60.105	Meleagris_gallopavo
ENSCHIG00000017954	-	99	75.168	ENSMAUG00000021895	Utp6	99	75.168	Mesocricetus_auratus
ENSCHIG00000017954	-	100	73.244	ENSMICG00000002632	UTP6	100	73.244	Microcebus_murinus
ENSCHIG00000017954	-	99	75.000	ENSMOCG00000014163	Utp6	99	75.000	Microtus_ochrogaster
ENSCHIG00000017954	-	100	53.344	ENSMMOG00000008653	utp6	100	57.627	Mola_mola
ENSCHIG00000017954	-	100	62.709	ENSMODG00000019206	UTP6	100	62.709	Monodelphis_domestica
ENSCHIG00000017954	-	100	52.676	ENSMALG00000021112	utp6	100	52.676	Monopterus_albus
ENSCHIG00000017954	-	99	74.832	MGP_CAROLIEiJ_G0016828	Utp6	99	74.832	Mus_caroli
ENSCHIG00000017954	-	99	75.336	ENSMUSG00000035575	Utp6	99	75.336	Mus_musculus
ENSCHIG00000017954	-	99	64.489	MGP_PahariEiJ_G0017965	Utp6	99	64.489	Mus_pahari
ENSCHIG00000017954	-	99	74.664	MGP_SPRETEiJ_G0017672	Utp6	99	74.664	Mus_spretus
ENSCHIG00000017954	-	100	74.080	ENSMPUG00000014581	UTP6	100	74.080	Mustela_putorius_furo
ENSCHIG00000017954	-	100	75.418	ENSMLUG00000016422	UTP6	100	75.418	Myotis_lucifugus
ENSCHIG00000017954	-	99	73.322	ENSNGAG00000015482	Utp6	99	73.322	Nannospalax_galili
ENSCHIG00000017954	-	100	53.512	ENSNBRG00000019714	utp6	100	53.512	Neolamprologus_brichardi
ENSCHIG00000017954	-	100	73.913	ENSNLEG00000011009	UTP6	100	73.913	Nomascus_leucogenys
ENSCHIG00000017954	-	88	58.865	ENSOPRG00000008446	-	88	58.865	Ochotona_princeps
ENSCHIG00000017954	-	66	70.638	ENSODEG00000011971	UTP6	100	70.638	Octodon_degus
ENSCHIG00000017954	-	100	53.177	ENSONIG00000018090	utp6	100	53.177	Oreochromis_niloticus
ENSCHIG00000017954	-	98	61.630	ENSOANG00000004279	UTP6	99	61.630	Ornithorhynchus_anatinus
ENSCHIG00000017954	-	99	72.483	ENSOCUG00000016980	UTP6	99	72.483	Oryctolagus_cuniculus
ENSCHIG00000017954	-	99	52.596	ENSORLG00000003546	utp6	64	52.596	Oryzias_latipes
ENSCHIG00000017954	-	99	52.596	ENSORLG00020010377	utp6	99	52.596	Oryzias_latipes_hni
ENSCHIG00000017954	-	99	52.181	ENSORLG00015008893	utp6	99	52.181	Oryzias_latipes_hsok
ENSCHIG00000017954	-	100	53.846	ENSOMEG00000017487	utp6	100	53.846	Oryzias_melastigma
ENSCHIG00000017954	-	87	66.221	ENSOGAG00000004511	UTP6	100	66.221	Otolemur_garnettii
ENSCHIG00000017954	-	100	99.498	ENSOARG00000013474	UTP6	100	99.498	Ovis_aries
ENSCHIG00000017954	-	100	75.084	ENSPPAG00000038089	UTP6	100	75.084	Pan_paniscus
ENSCHIG00000017954	-	100	62.207	ENSPPAG00000016895	-	100	62.207	Pan_paniscus
ENSCHIG00000017954	-	100	76.923	ENSPPRG00000001010	UTP6	100	76.923	Panthera_pardus
ENSCHIG00000017954	-	100	77.090	ENSPTIG00000013913	UTP6	100	77.090	Panthera_tigris_altaica
ENSCHIG00000017954	-	100	61.873	ENSPTRG00000044798	-	100	61.873	Pan_troglodytes
ENSCHIG00000017954	-	100	75.084	ENSPTRG00000008977	UTP6	100	75.084	Pan_troglodytes
ENSCHIG00000017954	-	100	71.786	ENSPANG00000023113	UTP6	100	71.786	Papio_anubis
ENSCHIG00000017954	-	99	59.022	ENSPANG00000034274	-	99	59.022	Papio_anubis
ENSCHIG00000017954	-	100	51.586	ENSPKIG00000004653	utp6	100	51.586	Paramormyrops_kingsleyae
ENSCHIG00000017954	-	100	61.037	ENSPSIG00000012435	UTP6	100	61.037	Pelodiscus_sinensis
ENSCHIG00000017954	-	100	52.007	ENSPMGG00000009548	utp6	100	52.007	Periophthalmus_magnuspinnatus
ENSCHIG00000017954	-	99	76.007	ENSPEMG00000014081	Utp6	99	76.007	Peromyscus_maniculatus_bairdii
ENSCHIG00000017954	-	93	44.504	ENSPMAG00000009561	utp6	100	44.504	Petromyzon_marinus
ENSCHIG00000017954	-	100	63.545	ENSPCIG00000029968	UTP6	86	63.545	Phascolarctos_cinereus
ENSCHIG00000017954	-	100	53.167	ENSPFOG00000013918	utp6	100	53.167	Poecilia_formosa
ENSCHIG00000017954	-	100	53.333	ENSPLAG00000017825	utp6	100	53.333	Poecilia_latipinna
ENSCHIG00000017954	-	100	52.833	ENSPMEG00000008133	utp6	100	52.833	Poecilia_mexicana
ENSCHIG00000017954	-	100	52.341	ENSPREG00000013108	utp6	99	52.341	Poecilia_reticulata
ENSCHIG00000017954	-	100	72.074	ENSPPYG00000008154	UTP6	100	72.074	Pongo_abelii
ENSCHIG00000017954	-	63	55.467	ENSPCAG00000014878	-	69	55.467	Procavia_capensis
ENSCHIG00000017954	-	100	72.575	ENSPCOG00000010224	UTP6	100	72.575	Propithecus_coquereli
ENSCHIG00000017954	-	100	73.244	ENSPVAG00000015759	UTP6	100	73.244	Pteropus_vampyrus
ENSCHIG00000017954	-	100	52.676	ENSPNYG00000002290	utp6	100	52.676	Pundamilia_nyererei
ENSCHIG00000017954	-	100	49.666	ENSPNAG00000027370	utp6	100	49.666	Pygocentrus_nattereri
ENSCHIG00000017954	-	99	72.483	ENSRNOG00000014209	Utp6	99	72.483	Rattus_norvegicus
ENSCHIG00000017954	-	100	74.080	ENSRBIG00000020822	UTP6	100	74.080	Rhinopithecus_bieti
ENSCHIG00000017954	-	100	74.080	ENSRROG00000036838	UTP6	100	74.080	Rhinopithecus_roxellana
ENSCHIG00000017954	-	100	53.000	ENSSFOG00015005978	utp6	100	53.000	Scleropages_formosus
ENSCHIG00000017954	-	100	52.341	ENSSMAG00000014772	utp6	100	52.341	Scophthalmus_maximus
ENSCHIG00000017954	-	100	53.344	ENSSDUG00000000329	utp6	100	53.344	Seriola_dumerili
ENSCHIG00000017954	-	100	53.512	ENSSLDG00000016724	utp6	100	53.512	Seriola_lalandi_dorsalis
ENSCHIG00000017954	-	99	65.604	ENSSARG00000010778	UTP6	99	65.604	Sorex_araneus
ENSCHIG00000017954	-	100	61.204	ENSSPUG00000005273	UTP6	100	61.204	Sphenodon_punctatus
ENSCHIG00000017954	-	100	52.676	ENSSPAG00000011871	utp6	99	52.676	Stegastes_partitus
ENSCHIG00000017954	-	100	77.090	ENSSSCG00000017745	UTP6	100	79.630	Sus_scrofa
ENSCHIG00000017954	-	100	60.267	ENSTGUG00000004999	UTP6	100	60.267	Taeniopygia_guttata
ENSCHIG00000017954	-	99	53.356	ENSTRUG00000012005	utp6	99	53.356	Takifugu_rubripes
ENSCHIG00000017954	-	99	54.027	ENSTNIG00000003235	utp6	99	54.027	Tetraodon_nigroviridis
ENSCHIG00000017954	-	67	65.193	ENSTBEG00000005388	-	67	65.193	Tupaia_belangeri
ENSCHIG00000017954	-	100	78.261	ENSTTRG00000009911	UTP6	100	78.261	Tursiops_truncatus
ENSCHIG00000017954	-	99	76.342	ENSUMAG00000015139	UTP6	99	76.342	Ursus_maritimus
ENSCHIG00000017954	-	100	78.428	ENSVPAG00000005782	UTP6	100	78.428	Vicugna_pacos
ENSCHIG00000017954	-	100	76.421	ENSVVUG00000012238	UTP6	100	76.421	Vulpes_vulpes
ENSCHIG00000017954	-	100	46.823	ENSXETG00000020057	utp6	100	46.823	Xenopus_tropicalis
ENSCHIG00000017954	-	100	52.326	ENSXCOG00000013626	utp6	100	52.326	Xiphophorus_couchianus
ENSCHIG00000017954	-	100	52.667	ENSXMAG00000017414	utp6	100	52.667	Xiphophorus_maculatus