EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000018055 (Gene tree)
Gene ID: 102185787
Gene Symbol: TTC21A
Alias: IFT139A|STI2
Full Name: tetratricopeptide repeat domain 21A
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 33996 bases
Position: chr22:12291062-12325057
Accession: 102185787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000018905	PPR	PF01535.20	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000026676	TTC21A-201	3960	-	ENSCHIP00000018861	1319 (aa)	-	UPI000D18D699
ENSCHIT00000026695	TTC21A-202	3939	XM_013973365	ENSCHIP00000018880	1312 (aa)	XP_013828819	UPI000D19401E
ENSCHIT00000026720	TTC21A-203	3715	-	ENSCHIP00000018905	724 (aa)	-	UPI000D193B2F

Gene Model

Click here to download ENSCHIG00000018055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018055's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000018055	TTC21A	100	95.718	ENSBTAG00000010477	TTC21A	100	95.718	Bos_taurus
ENSCHIG00000018055	TTC21A	100	82.231	ENSCGRG00001020151	Ttc21a	56	82.231	Cricetulus_griseus_chok1gshd
ENSCHIG00000018055	TTC21A	100	82.231	ENSCGRG00000012945	Ttc21a	53	82.231	Cricetulus_griseus_crigri
ENSCHIG00000018055	TTC21A	100	71.034	ENSDORG00000027538	Ttc21a	56	71.034	Dipodomys_ordii
ENSCHIG00000018055	TTC21A	100	77.655	ENSETEG00000018753	TTC21A	55	77.655	Echinops_telfairi
ENSCHIG00000018055	TTC21A	100	81.405	ENSJJAG00000005140	Ttc21a	55	81.405	Jaculus_jaculus
ENSCHIG00000018055	TTC21A	100	82.483	ENSMUSG00000032514	Ttc21a	55	82.483	Mus_musculus
ENSCHIG00000018055	TTC21A	100	82.759	MGP_PahariEiJ_G0015676	Ttc21a	55	82.759	Mus_pahari
ENSCHIG00000018055	TTC21A	100	82.621	MGP_SPRETEiJ_G0033957	Ttc21a	55	82.621	Mus_spretus
ENSCHIG00000018055	TTC21A	100	83.425	ENSPPRG00000012924	TTC21A	57	83.425	Panthera_pardus
ENSCHIG00000018055	TTC21A	99	83.564	ENSPEMG00000010809	Ttc21a	55	83.564	Peromyscus_maniculatus_bairdii
ENSCHIG00000018055	TTC21A	100	82.897	ENSRNOG00000034089	Ttc21a	55	82.897	Rattus_norvegicus
ENSCHIG00000018055	TTC21A	100	85.083	ENSUAMG00000020073	TTC21A	99	88.388	Ursus_americanus