EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000018072 (Gene tree)
Gene ID: 102190248
Gene Symbol: PARP1
Alias: ADPRT|PARP|PPOL
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 41806 bases
Position: chr16:27928342-27970147
Accession: 102190248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000019033	PARP	PF00644.20	6.1e-73	1	1
ENSCHIP00000019021	PARP	PF00644.20	6.1e-73	1	1
ENSCHIP00000018987	PARP	PF00644.20	6.6e-73	1	1
ENSCHIP00000019007	PARP	PF00644.20	9.5e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000026822	PARP1-202	3063	-	ENSCHIP00000019007	1020 (aa)	-	UPI000D196CA0
ENSCHIT00000026848	PARP1-204	2967	-	ENSCHIP00000019033	988 (aa)	-	UPI000D192DCE
ENSCHIT00000026802	PARP1-201	4388	XM_005690533	ENSCHIP00000018987	1016 (aa)	XP_005690590	UPI0008471FC3
ENSCHIT00000026836	PARP1-203	2994	-	ENSCHIP00000019021	997 (aa)	-	UPI000D18E969

Gene Model

Click here to download ENSCHIG00000018072's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03410	Base excision repair	KEGG
chx04210	Apoptosis	KEGG
chx04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000018072	PARP1	51	32.900	ENSCHIG00000016033	PARP3	98	32.961
ENSCHIG00000018072	PARP1	51	39.464	ENSCHIG00000024572	PARP2	92	39.464

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000018072	PARP1	100	90.954	ENSG00000143799	PARP1	100	90.954	Homo_sapiens
ENSCHIG00000018072	PARP1	100	68.915	ENSAPOG00000006414	parp1	100	68.364	Acanthochromis_polyacanthus
ENSCHIG00000018072	PARP1	99	88.606	ENSAMEG00000014451	PARP1	99	88.606	Ailuropoda_melanoleuca
ENSCHIG00000018072	PARP1	100	67.937	ENSACIG00000005651	parp1	100	67.882	Amphilophus_citrinellus
ENSCHIG00000018072	PARP1	100	69.306	ENSAOCG00000021005	parp1	100	68.952	Amphiprion_ocellaris
ENSCHIG00000018072	PARP1	100	69.404	ENSAPEG00000004784	parp1	100	68.952	Amphiprion_percula
ENSCHIG00000018072	PARP1	99	69.027	ENSATEG00000010457	parp1	99	68.571	Anabas_testudineus
ENSCHIG00000018072	PARP1	87	79.318	ENSAPLG00000014039	PARP1	100	79.318	Anas_platyrhynchos
ENSCHIG00000018072	PARP1	100	75.615	ENSACAG00000006189	PARP1	100	75.814	Anolis_carolinensis
ENSCHIG00000018072	PARP1	100	90.551	ENSANAG00000032699	PARP1	100	90.551	Aotus_nancymaae
ENSCHIG00000018072	PARP1	100	70.109	ENSACLG00000015489	parp1	100	70.109	Astatotilapia_calliptera
ENSCHIG00000018072	PARP1	100	67.317	ENSAMXG00000006465	parp1	100	67.415	Astyanax_mexicanus
ENSCHIG00000018072	PARP1	100	97.835	ENSBTAG00000000837	PARP1	100	97.835	Bos_taurus
ENSCHIG00000018072	PARP1	85	43.825	WBGene00004049	parp-1	100	45.977	Caenorhabditis_elegans
ENSCHIG00000018072	PARP1	100	90.256	ENSCJAG00000012831	PARP1	100	90.256	Callithrix_jacchus
ENSCHIG00000018072	PARP1	96	89.538	ENSCAFG00000016089	PARP1	100	89.538	Canis_familiaris
ENSCHIG00000018072	PARP1	100	89.577	ENSCAFG00020001660	PARP1	100	89.577	Canis_lupus_dingo
ENSCHIG00000018072	PARP1	90	91.295	ENSTSYG00000003699	PARP1	100	91.295	Carlito_syrichta
ENSCHIG00000018072	PARP1	98	73.275	ENSCAPG00000011113	-	100	72.697	Cavia_aperea
ENSCHIG00000018072	PARP1	100	88.397	ENSCPOG00000015643	-	100	88.142	Cavia_porcellus
ENSCHIG00000018072	PARP1	100	90.354	ENSCCAG00000033484	PARP1	100	90.354	Cebus_capucinus
ENSCHIG00000018072	PARP1	100	90.560	ENSCATG00000038981	PARP1	100	90.039	Cercocebus_atys
ENSCHIG00000018072	PARP1	100	88.004	ENSCLAG00000006637	PARP1	100	88.004	Chinchilla_lanigera
ENSCHIG00000018072	PARP1	66	96.875	ENSCHOG00000003539	PARP1	66	96.875	Choloepus_hoffmanni
ENSCHIG00000018072	PARP1	100	78.487	ENSCPBG00000011958	PARP1	100	78.424	Chrysemys_picta_bellii
ENSCHIG00000018072	PARP1	99	89.528	ENSCANG00000041340	PARP1	100	89.528	Colobus_angolensis_palliatus
ENSCHIG00000018072	PARP1	100	88.987	ENSCGRG00001020559	Parp1	100	88.987	Cricetulus_griseus_chok1gshd
ENSCHIG00000018072	PARP1	99	89.150	ENSCGRG00000004864	Parp1	100	89.150	Cricetulus_griseus_crigri
ENSCHIG00000018072	PARP1	100	68.426	ENSCSEG00000020665	parp1	99	76.923	Cynoglossus_semilaevis
ENSCHIG00000018072	PARP1	99	68.053	ENSCVAG00000021372	parp1	99	67.513	Cyprinodon_variegatus
ENSCHIG00000018072	PARP1	100	67.934	ENSDARG00000019529	parp1	100	68.164	Danio_rerio
ENSCHIG00000018072	PARP1	96	87.474	ENSDNOG00000012059	PARP1	100	87.474	Dasypus_novemcinctus
ENSCHIG00000018072	PARP1	99	86.680	ENSDORG00000005234	Parp1	100	86.680	Dipodomys_ordii
ENSCHIG00000018072	PARP1	99	41.822	FBgn0010247	Parp	99	41.822	Drosophila_melanogaster
ENSCHIG00000018072	PARP1	88	97.656	ENSETEG00000013254	PARP1	88	97.656	Echinops_telfairi
ENSCHIG00000018072	PARP1	99	56.426	ENSEBUG00000005820	parp1	100	56.256	Eptatretus_burgeri
ENSCHIG00000018072	PARP1	98	90.891	ENSEASG00005013275	PARP1	99	90.900	Equus_asinus_asinus
ENSCHIG00000018072	PARP1	100	90.855	ENSECAG00000019207	PARP1	100	90.954	Equus_caballus
ENSCHIG00000018072	PARP1	100	86.346	ENSEEUG00000012253	PARP1	100	86.346	Erinaceus_europaeus
ENSCHIG00000018072	PARP1	100	69.017	ENSELUG00000017336	parp1	100	69.513	Esox_lucius
ENSCHIG00000018072	PARP1	97	88.289	ENSFCAG00000005777	PARP1	100	88.355	Felis_catus
ENSCHIG00000018072	PARP1	99	77.482	ENSFALG00000011578	PARP1	100	77.380	Ficedula_albicollis
ENSCHIG00000018072	PARP1	96	87.513	ENSFDAG00000017662	PARP1	100	87.513	Fukomys_damarensis
ENSCHIG00000018072	PARP1	99	69.155	ENSFHEG00000001117	parp1	99	68.535	Fundulus_heteroclitus
ENSCHIG00000018072	PARP1	99	67.748	ENSGMOG00000014929	parp1	99	67.389	Gadus_morhua
ENSCHIG00000018072	PARP1	100	77.876	ENSGALG00000009228	PARP1	100	77.953	Gallus_gallus
ENSCHIG00000018072	PARP1	100	68.426	ENSGAFG00000010450	parp1	100	68.200	Gambusia_affinis
ENSCHIG00000018072	PARP1	100	67.742	ENSGACG00000011280	parp1	100	67.480	Gasterosteus_aculeatus
ENSCHIG00000018072	PARP1	100	77.974	ENSGAGG00000010066	PARP1	100	77.909	Gopherus_agassizii
ENSCHIG00000018072	PARP1	100	90.855	ENSGGOG00000006308	PARP1	100	90.855	Gorilla_gorilla
ENSCHIG00000018072	PARP1	100	69.697	ENSHBUG00000010490	parp1	100	69.246	Haplochromis_burtoni
ENSCHIG00000018072	PARP1	96	87.113	ENSHGLG00000003992	PARP1	93	87.113	Heterocephalus_glaber_female
ENSCHIG00000018072	PARP1	96	87.113	ENSHGLG00100016965	PARP1	93	87.113	Heterocephalus_glaber_male
ENSCHIG00000018072	PARP1	100	68.293	ENSHCOG00000011619	parp1	100	68.000	Hippocampus_comes
ENSCHIG00000018072	PARP1	100	66.860	ENSIPUG00000020250	parp1	100	66.957	Ictalurus_punctatus
ENSCHIG00000018072	PARP1	100	90.462	ENSSTOG00000016000	PARP1	100	90.462	Ictidomys_tridecemlineatus
ENSCHIG00000018072	PARP1	100	87.721	ENSJJAG00000023497	Parp1	100	87.721	Jaculus_jaculus
ENSCHIG00000018072	PARP1	100	68.622	ENSKMAG00000011627	parp1	100	68.426	Kryptolebias_marmoratus
ENSCHIG00000018072	PARP1	100	68.982	ENSLBEG00000013376	parp1	100	68.493	Labrus_bergylta
ENSCHIG00000018072	PARP1	99	55.673	ENSLACG00000002735	PARP1	100	57.422	Latimeria_chalumnae
ENSCHIG00000018072	PARP1	100	71.288	ENSLOCG00000015798	parp1	100	71.921	Lepisosteus_oculatus
ENSCHIG00000018072	PARP1	99	87.064	ENSLAFG00000007830	PARP1	100	88.025	Loxodonta_africana
ENSCHIG00000018072	PARP1	100	90.462	ENSMFAG00000002526	PARP1	100	89.941	Macaca_fascicularis
ENSCHIG00000018072	PARP1	100	90.560	ENSMMUG00000021820	PARP1	100	90.039	Macaca_mulatta
ENSCHIG00000018072	PARP1	100	90.560	ENSMNEG00000034074	PARP1	100	90.039	Macaca_nemestrina
ENSCHIG00000018072	PARP1	100	88.333	ENSMLEG00000012344	PARP1	100	87.807	Mandrillus_leucophaeus
ENSCHIG00000018072	PARP1	100	69.774	ENSMAMG00000020652	parp1	100	69.676	Mastacembelus_armatus
ENSCHIG00000018072	PARP1	100	69.892	ENSMZEG00005016907	parp1	100	69.442	Maylandia_zebra
ENSCHIG00000018072	PARP1	99	77.789	ENSMGAG00000007760	PARP1	100	77.869	Meleagris_gallopavo
ENSCHIG00000018072	PARP1	100	88.496	ENSMAUG00000008306	Parp1	100	88.496	Mesocricetus_auratus
ENSCHIG00000018072	PARP1	100	86.726	ENSMICG00000017076	PARP1	100	86.726	Microcebus_murinus
ENSCHIG00000018072	PARP1	100	88.397	ENSMOCG00000014315	Parp1	100	88.397	Microtus_ochrogaster
ENSCHIG00000018072	PARP1	100	68.343	ENSMMOG00000015966	parp1	100	68.343	Mola_mola
ENSCHIG00000018072	PARP1	100	82.104	ENSMODG00000006076	PARP1	100	82.891	Monodelphis_domestica
ENSCHIG00000018072	PARP1	100	67.610	ENSMALG00000004057	parp1	100	66.993	Monopterus_albus
ENSCHIG00000018072	PARP1	100	88.703	MGP_CAROLIEiJ_G0014978	Parp1	100	96.939	Mus_caroli
ENSCHIG00000018072	PARP1	100	88.507	ENSMUSG00000026496	Parp1	99	96.939	Mus_musculus
ENSCHIG00000018072	PARP1	100	88.507	MGP_SPRETEiJ_G0015777	Parp1	100	96.939	Mus_spretus
ENSCHIG00000018072	PARP1	100	88.692	ENSMPUG00000004585	PARP1	100	88.189	Mustela_putorius_furo
ENSCHIG00000018072	PARP1	90	73.026	ENSMLUG00000012285	PARP1	100	72.917	Myotis_lucifugus
ENSCHIG00000018072	PARP1	100	88.987	ENSNGAG00000003885	Parp1	100	89.184	Nannospalax_galili
ENSCHIG00000018072	PARP1	100	70.010	ENSNBRG00000017434	parp1	100	70.010	Neolamprologus_brichardi
ENSCHIG00000018072	PARP1	95	95.767	ENSNLEG00000013905	PARP1	100	95.767	Nomascus_leucogenys
ENSCHIG00000018072	PARP1	66	91.343	ENSMEUG00000007720	PARP1	87	91.343	Notamacropus_eugenii
ENSCHIG00000018072	PARP1	100	89.479	ENSOPRG00000011722	PARP1	100	89.479	Ochotona_princeps
ENSCHIG00000018072	PARP1	100	85.827	ENSODEG00000007424	PARP1	100	85.827	Octodon_degus
ENSCHIG00000018072	PARP1	100	69.892	ENSONIG00000013486	parp1	100	69.208	Oreochromis_niloticus
ENSCHIG00000018072	PARP1	96	82.088	ENSOANG00000001488	PARP1	100	81.865	Ornithorhynchus_anatinus
ENSCHIG00000018072	PARP1	100	90.373	ENSOCUG00000017820	PARP1	100	90.373	Oryctolagus_cuniculus
ENSCHIG00000018072	PARP1	100	67.742	ENSORLG00000013691	parp1	100	68.102	Oryzias_latipes
ENSCHIG00000018072	PARP1	99	67.548	ENSORLG00020001074	parp1	99	67.923	Oryzias_latipes_hni
ENSCHIG00000018072	PARP1	100	67.840	ENSORLG00015007090	parp1	100	68.200	Oryzias_latipes_hsok
ENSCHIG00000018072	PARP1	100	89.577	ENSOGAG00000016206	PARP1	100	89.577	Otolemur_garnettii
ENSCHIG00000018072	PARP1	100	99.409	ENSOARG00000000811	PARP1	100	99.409	Ovis_aries
ENSCHIG00000018072	PARP1	100	90.364	ENSPPAG00000040862	PARP1	100	90.364	Pan_paniscus
ENSCHIG00000018072	PARP1	96	88.217	ENSPPRG00000003528	PARP1	100	88.284	Panthera_pardus
ENSCHIG00000018072	PARP1	93	75.472	ENSPTIG00000009102	PARP1	98	75.472	Panthera_tigris_altaica
ENSCHIG00000018072	PARP1	100	90.364	ENSPTRG00000002049	PARP1	100	90.364	Pan_troglodytes
ENSCHIG00000018072	PARP1	100	90.668	ENSPANG00000011198	PARP1	100	90.148	Papio_anubis
ENSCHIG00000018072	PARP1	100	68.824	ENSPKIG00000006039	parp1	100	69.412	Paramormyrops_kingsleyae
ENSCHIG00000018072	PARP1	99	78.106	ENSPSIG00000016374	PARP1	100	78.163	Pelodiscus_sinensis
ENSCHIG00000018072	PARP1	100	65.951	ENSPMGG00000008936	parp1	100	65.400	Periophthalmus_magnuspinnatus
ENSCHIG00000018072	PARP1	100	88.692	ENSPEMG00000020230	Parp1	100	88.692	Peromyscus_maniculatus_bairdii
ENSCHIG00000018072	PARP1	100	80.610	ENSPCIG00000006436	PARP1	100	87.149	Phascolarctos_cinereus
ENSCHIG00000018072	PARP1	99	68.338	ENSPFOG00000002342	parp1	99	67.913	Poecilia_formosa
ENSCHIG00000018072	PARP1	99	69.027	ENSPLAG00000000909	parp1	99	68.602	Poecilia_latipinna
ENSCHIG00000018072	PARP1	99	69.125	ENSPMEG00000013979	parp1	99	68.799	Poecilia_mexicana
ENSCHIG00000018072	PARP1	99	69.223	ENSPREG00000001114	parp1	99	68.898	Poecilia_reticulata
ENSCHIG00000018072	PARP1	99	91.077	ENSPPYG00000000164	PARP1	100	91.077	Pongo_abelii
ENSCHIG00000018072	PARP1	65	95.988	ENSPCAG00000005558	-	65	95.988	Procavia_capensis
ENSCHIG00000018072	PARP1	100	90.167	ENSPCOG00000016918	PARP1	100	90.265	Propithecus_coquereli
ENSCHIG00000018072	PARP1	92	94.811	ENSPVAG00000005543	PARP1	92	94.811	Pteropus_vampyrus
ENSCHIG00000018072	PARP1	100	70.109	ENSPNYG00000009702	parp1	100	70.109	Pundamilia_nyererei
ENSCHIG00000018072	PARP1	100	68.707	ENSPNAG00000002787	parp1	100	68.744	Pygocentrus_nattereri
ENSCHIG00000018072	PARP1	100	87.819	ENSRNOG00000003084	Parp1	100	87.623	Rattus_norvegicus
ENSCHIG00000018072	PARP1	100	90.265	ENSRBIG00000044893	PARP1	100	89.842	Rhinopithecus_bieti
ENSCHIG00000018072	PARP1	100	90.265	ENSRROG00000029280	PARP1	100	89.842	Rhinopithecus_roxellana
ENSCHIG00000018072	PARP1	100	65.204	ENSRROG00000040615	-	100	68.856	Rhinopithecus_roxellana
ENSCHIG00000018072	PARP1	100	90.157	ENSSBOG00000010144	PARP1	100	90.157	Saimiri_boliviensis_boliviensis
ENSCHIG00000018072	PARP1	99	82.480	ENSSHAG00000001991	PARP1	100	82.769	Sarcophilus_harrisii
ENSCHIG00000018072	PARP1	100	69.050	ENSSFOG00015020017	parp1	100	69.050	Scleropages_formosus
ENSCHIG00000018072	PARP1	100	68.817	ENSSMAG00000013799	parp1	100	68.266	Scophthalmus_maximus
ENSCHIG00000018072	PARP1	100	68.231	ENSSDUG00000016626	parp1	100	67.875	Seriola_dumerili
ENSCHIG00000018072	PARP1	100	68.231	ENSSLDG00000006384	parp1	100	67.875	Seriola_lalandi_dorsalis
ENSCHIG00000018072	PARP1	55	95.139	ENSSARG00000009436	-	59	95.139	Sorex_araneus
ENSCHIG00000018072	PARP1	100	73.353	ENSSPUG00000007790	PARP1	100	73.939	Sphenodon_punctatus
ENSCHIG00000018072	PARP1	100	67.255	ENSSPAG00000019074	parp1	100	68.376	Stegastes_partitus
ENSCHIG00000018072	PARP1	100	90.462	ENSSSCG00000023660	PARP1	100	90.462	Sus_scrofa
ENSCHIG00000018072	PARP1	97	77.531	ENSTGUG00000004260	-	100	78.111	Taeniopygia_guttata
ENSCHIG00000018072	PARP1	100	69.013	ENSTRUG00000014490	parp1	100	68.627	Takifugu_rubripes
ENSCHIG00000018072	PARP1	100	67.868	ENSTNIG00000016384	parp1	100	67.446	Tetraodon_nigroviridis
ENSCHIG00000018072	PARP1	83	95.303	ENSTBEG00000002364	PARP1	92	95.303	Tupaia_belangeri
ENSCHIG00000018072	PARP1	100	87.008	ENSTTRG00000000188	PARP1	100	87.008	Tursiops_truncatus
ENSCHIG00000018072	PARP1	96	89.264	ENSUAMG00000014388	PARP1	100	89.264	Ursus_americanus
ENSCHIG00000018072	PARP1	96	80.556	ENSUMAG00000014555	PARP1	99	80.410	Ursus_maritimus
ENSCHIG00000018072	PARP1	84	97.647	ENSVPAG00000011411	PARP1	84	97.647	Vicugna_pacos
ENSCHIG00000018072	PARP1	96	89.538	ENSVVUG00000001655	PARP1	100	89.538	Vulpes_vulpes
ENSCHIG00000018072	PARP1	98	71.314	ENSXETG00000022610	parp1	99	71.988	Xenopus_tropicalis
ENSCHIG00000018072	PARP1	99	68.535	ENSXMAG00000003632	parp1	99	68.209	Xiphophorus_maculatus