EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000018192 (Gene tree)
Gene ID: 102171449
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 47062 bases
Position: chr16:63176118-63223179
Accession: 102171449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000019008	EST1	PF10374.9	8.5e-25	1	1
ENSCHIP00000019008	EST1_DNA_bind	PF10373.9	2.1e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000026823	SMG7-201	3426	XM_013970377	ENSCHIP00000019008	1141 (aa)	XP_013825831	UPI000D1961EE

Gene Model

Click here to download ENSCHIG00000018192's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018192's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000018192	SMG7	99	96.381	ENSG00000116698	SMG7	100	96.561	Homo_sapiens
ENSCHIG00000018192	SMG7	89	71.257	ENSAPOG00000009611	smg7	95	71.861	Acanthochromis_polyacanthus
ENSCHIG00000018192	SMG7	96	92.838	ENSAMEG00000002357	SMG7	100	92.838	Ailuropoda_melanoleuca
ENSCHIG00000018192	SMG7	91	68.325	ENSACIG00000015152	smg7	100	60.892	Amphilophus_citrinellus
ENSCHIG00000018192	SMG7	99	64.860	ENSAOCG00000013538	smg7	100	65.053	Amphiprion_ocellaris
ENSCHIG00000018192	SMG7	99	64.725	ENSAPEG00000007851	smg7	100	64.918	Amphiprion_percula
ENSCHIG00000018192	SMG7	99	62.010	ENSATEG00000006931	smg7	100	62.623	Anabas_testudineus
ENSCHIG00000018192	SMG7	99	81.313	ENSAPLG00000015811	SMG7	99	81.229	Anas_platyrhynchos
ENSCHIG00000018192	SMG7	99	83.613	ENSACAG00000014989	SMG7	99	83.529	Anolis_carolinensis
ENSCHIG00000018192	SMG7	96	95.807	ENSANAG00000028114	SMG7	99	92.119	Aotus_nancymaae
ENSCHIG00000018192	SMG7	99	64.029	ENSACLG00000022079	smg7	100	64.963	Astatotilapia_calliptera
ENSCHIG00000018192	SMG7	99	66.639	ENSAMXG00000020809	smg7	100	66.472	Astyanax_mexicanus
ENSCHIG00000018192	SMG7	99	98.853	ENSBTAG00000008003	SMG7	97	98.853	Bos_taurus
ENSCHIG00000018192	SMG7	99	96.117	ENSCJAG00000005135	SMG7	97	96.117	Callithrix_jacchus
ENSCHIG00000018192	SMG7	99	96.646	ENSCAFG00000013276	SMG7	97	96.646	Canis_familiaris
ENSCHIG00000018192	SMG7	99	96.646	ENSCAFG00020015475	SMG7	97	96.646	Canis_lupus_dingo
ENSCHIG00000018192	SMG7	99	95.322	ENSTSYG00000002667	SMG7	97	95.322	Carlito_syrichta
ENSCHIG00000018192	SMG7	99	95.410	ENSCPOG00000008906	SMG7	99	94.440	Cavia_porcellus
ENSCHIG00000018192	SMG7	96	92.314	ENSCCAG00000028596	SMG7	100	92.314	Cebus_capucinus
ENSCHIG00000018192	SMG7	99	96.558	ENSCATG00000011063	SMG7	97	96.558	Cercocebus_atys
ENSCHIG00000018192	SMG7	99	96.028	ENSCLAG00000010751	SMG7	99	96.028	Chinchilla_lanigera
ENSCHIG00000018192	SMG7	99	96.558	ENSCSAG00000012654	SMG7	97	96.558	Chlorocebus_sabaeus
ENSCHIG00000018192	SMG7	92	87.679	ENSCHOG00000010522	SMG7	93	87.966	Choloepus_hoffmanni
ENSCHIG00000018192	SMG7	99	87.743	ENSCPBG00000015724	SMG7	99	87.658	Chrysemys_picta_bellii
ENSCHIG00000018192	SMG7	96	92.576	ENSCANG00000015680	SMG7	100	92.576	Colobus_angolensis_palliatus
ENSCHIG00000018192	SMG7	99	94.704	ENSCGRG00001013705	Smg7	99	94.621	Cricetulus_griseus_chok1gshd
ENSCHIG00000018192	SMG7	99	94.704	ENSCGRG00000018401	Smg7	99	94.704	Cricetulus_griseus_crigri
ENSCHIG00000018192	SMG7	95	71.000	ENSCVAG00000011842	smg7	100	70.500	Cyprinodon_variegatus
ENSCHIG00000018192	SMG7	99	66.003	ENSDARG00000060767	smg7	100	66.086	Danio_rerio
ENSCHIG00000018192	SMG7	99	95.146	ENSDORG00000007331	Smg7	99	95.146	Dipodomys_ordii
ENSCHIG00000018192	SMG7	96	94.531	ENSETEG00000002654	SMG7	99	94.531	Echinops_telfairi
ENSCHIG00000018192	SMG7	99	97.176	ENSEASG00005006524	SMG7	99	97.090	Equus_asinus_asinus
ENSCHIG00000018192	SMG7	99	97.264	ENSECAG00000004313	SMG7	99	97.225	Equus_caballus
ENSCHIG00000018192	SMG7	96	95.355	ENSEEUG00000002024	SMG7	94	95.355	Erinaceus_europaeus
ENSCHIG00000018192	SMG7	92	76.923	ENSELUG00000010293	smg7	100	64.720	Esox_lucius
ENSCHIG00000018192	SMG7	99	97.087	ENSFCAG00000010900	SMG7	99	97.002	Felis_catus
ENSCHIG00000018192	SMG7	98	82.483	ENSFALG00000003047	SMG7	100	82.283	Ficedula_albicollis
ENSCHIG00000018192	SMG7	99	96.021	ENSFDAG00000012121	SMG7	98	96.021	Fukomys_damarensis
ENSCHIG00000018192	SMG7	99	60.859	ENSFHEG00000011073	smg7	100	60.744	Fundulus_heteroclitus
ENSCHIG00000018192	SMG7	89	66.909	ENSGMOG00000004916	smg7	92	66.909	Gadus_morhua
ENSCHIG00000018192	SMG7	99	81.550	ENSGALG00000004667	SMG7	99	81.466	Gallus_gallus
ENSCHIG00000018192	SMG7	99	60.579	ENSGAFG00000019000	smg7	100	60.413	Gambusia_affinis
ENSCHIG00000018192	SMG7	97	64.721	ENSGACG00000001634	smg7	100	64.721	Gasterosteus_aculeatus
ENSCHIG00000018192	SMG7	99	96.293	ENSGGOG00000002342	SMG7	97	96.293	Gorilla_gorilla
ENSCHIG00000018192	SMG7	99	64.716	ENSHBUG00000003726	smg7	97	74.112	Haplochromis_burtoni
ENSCHIG00000018192	SMG7	98	96.078	ENSHGLG00000009353	SMG7	100	96.078	Heterocephalus_glaber_female
ENSCHIG00000018192	SMG7	98	94.385	ENSHGLG00100009637	-	100	94.385	Heterocephalus_glaber_male
ENSCHIG00000018192	SMG7	99	88.095	ENSHGLG00100004878	-	99	88.095	Heterocephalus_glaber_male
ENSCHIG00000018192	SMG7	99	67.197	ENSIPUG00000016997	smg7	100	67.280	Ictalurus_punctatus
ENSCHIG00000018192	SMG7	99	96.823	ENSSTOG00000000401	SMG7	99	96.823	Ictidomys_tridecemlineatus
ENSCHIG00000018192	SMG7	99	94.797	ENSJJAG00000012351	Smg7	99	94.797	Jaculus_jaculus
ENSCHIG00000018192	SMG7	97	59.237	ENSKMAG00000004900	smg7	100	59.492	Kryptolebias_marmoratus
ENSCHIG00000018192	SMG7	99	62.303	ENSLBEG00000002983	smg7	99	62.003	Labrus_bergylta
ENSCHIG00000018192	SMG7	99	75.281	ENSLACG00000000972	SMG7	99	74.913	Latimeria_chalumnae
ENSCHIG00000018192	SMG7	99	67.500	ENSLOCG00000002010	smg7	99	67.500	Lepisosteus_oculatus
ENSCHIG00000018192	SMG7	99	96.378	ENSLAFG00000008186	SMG7	99	96.378	Loxodonta_africana
ENSCHIG00000018192	SMG7	99	96.646	ENSMFAG00000031653	SMG7	99	96.561	Macaca_fascicularis
ENSCHIG00000018192	SMG7	99	96.558	ENSMMUG00000018458	SMG7	97	96.558	Macaca_mulatta
ENSCHIG00000018192	SMG7	96	92.664	ENSMNEG00000034798	SMG7	100	92.664	Macaca_nemestrina
ENSCHIG00000018192	SMG7	99	96.558	ENSMLEG00000037170	SMG7	97	96.558	Mandrillus_leucophaeus
ENSCHIG00000018192	SMG7	88	63.796	ENSMAMG00000018733	smg7	85	67.797	Mastacembelus_armatus
ENSCHIG00000018192	SMG7	99	64.297	ENSMZEG00005015247	smg7	100	64.880	Maylandia_zebra
ENSCHIG00000018192	SMG7	99	81.403	ENSMGAG00000001561	SMG7	99	81.319	Meleagris_gallopavo
ENSCHIG00000018192	SMG7	99	95.146	ENSMAUG00000019484	Smg7	99	95.272	Mesocricetus_auratus
ENSCHIG00000018192	SMG7	99	96.381	ENSMICG00000007145	SMG7	99	96.381	Microcebus_murinus
ENSCHIG00000018192	SMG7	99	94.793	ENSMOCG00000020748	Smg7	99	94.793	Microtus_ochrogaster
ENSCHIG00000018192	SMG7	99	60.801	ENSMMOG00000001524	smg7	99	61.037	Mola_mola
ENSCHIG00000018192	SMG7	92	84.890	ENSMODG00000007139	SMG7	99	84.890	Monodelphis_domestica
ENSCHIG00000018192	SMG7	97	68.657	ENSMALG00000000061	smg7	93	68.657	Monopterus_albus
ENSCHIG00000018192	SMG7	99	94.704	MGP_CAROLIEiJ_G0014704	Smg7	99	93.822	Mus_caroli
ENSCHIG00000018192	SMG7	99	94.616	ENSMUSG00000042772	Smg7	99	94.616	Mus_musculus
ENSCHIG00000018192	SMG7	99	94.793	MGP_PahariEiJ_G0027940	Smg7	99	94.793	Mus_pahari
ENSCHIG00000018192	SMG7	99	94.704	MGP_SPRETEiJ_G0015511	Smg7	99	94.704	Mus_spretus
ENSCHIG00000018192	SMG7	100	95.355	ENSMPUG00000011732	SMG7	99	95.355	Mustela_putorius_furo
ENSCHIG00000018192	SMG7	100	95.881	ENSMLUG00000015417	SMG7	100	95.881	Myotis_lucifugus
ENSCHIG00000018192	SMG7	99	94.881	ENSNGAG00000009836	Smg7	99	94.881	Nannospalax_galili
ENSCHIG00000018192	SMG7	98	58.159	ENSNBRG00000024343	smg7	98	71.564	Neolamprologus_brichardi
ENSCHIG00000018192	SMG7	99	96.646	ENSNLEG00000018018	SMG7	97	96.646	Nomascus_leucogenys
ENSCHIG00000018192	SMG7	77	84.866	ENSMEUG00000004681	SMG7	77	85.077	Notamacropus_eugenii
ENSCHIG00000018192	SMG7	96	84.566	ENSOPRG00000013942	SMG7	96	84.292	Ochotona_princeps
ENSCHIG00000018192	SMG7	99	95.587	ENSODEG00000010390	SMG7	99	95.587	Octodon_degus
ENSCHIG00000018192	SMG7	99	61.388	ENSONIG00000000277	smg7	100	62.376	Oreochromis_niloticus
ENSCHIG00000018192	SMG7	98	90.248	ENSOANG00000000994	SMG7	100	90.603	Ornithorhynchus_anatinus
ENSCHIG00000018192	SMG7	99	89.938	ENSOCUG00000005887	SMG7	92	90.115	Oryctolagus_cuniculus
ENSCHIG00000018192	SMG7	99	62.178	ENSORLG00000007314	smg7	74	88.820	Oryzias_latipes
ENSCHIG00000018192	SMG7	99	62.594	ENSORLG00020015779	smg7	74	88.820	Oryzias_latipes_hni
ENSCHIG00000018192	SMG7	99	64.872	ENSORLG00015012289	smg7	100	62.469	Oryzias_latipes_hsok
ENSCHIG00000018192	SMG7	99	62.552	ENSOMEG00000002328	smg7	100	62.552	Oryzias_melastigma
ENSCHIG00000018192	SMG7	96	94.622	ENSOGAG00000003107	SMG7	93	94.439	Otolemur_garnettii
ENSCHIG00000018192	SMG7	99	99.647	ENSOARG00000001352	SMG7	97	99.647	Ovis_aries
ENSCHIG00000018192	SMG7	96	92.664	ENSPPAG00000031619	SMG7	100	92.664	Pan_paniscus
ENSCHIG00000018192	SMG7	99	97.264	ENSPPRG00000011222	SMG7	97	97.264	Panthera_pardus
ENSCHIG00000018192	SMG7	97	96.923	ENSPTIG00000007242	SMG7	100	93.362	Panthera_tigris_altaica
ENSCHIG00000018192	SMG7	96	96.445	ENSPTRG00000001764	SMG7	100	92.664	Pan_troglodytes
ENSCHIG00000018192	SMG7	99	96.558	ENSPANG00000004520	SMG7	97	96.558	Papio_anubis
ENSCHIG00000018192	SMG7	99	63.453	ENSPKIG00000007242	smg7	99	68.500	Paramormyrops_kingsleyae
ENSCHIG00000018192	SMG7	99	90.733	ENSPSIG00000012201	SMG7	99	90.556	Pelodiscus_sinensis
ENSCHIG00000018192	SMG7	55	58.673	ENSPMGG00000021833	smg7	89	54.500	Periophthalmus_magnuspinnatus
ENSCHIG00000018192	SMG7	99	94.351	ENSPEMG00000011315	Smg7	99	94.351	Peromyscus_maniculatus_bairdii
ENSCHIG00000018192	SMG7	99	88.823	ENSPCIG00000003786	SMG7	99	90.909	Phascolarctos_cinereus
ENSCHIG00000018192	SMG7	99	62.798	ENSPFOG00000019219	smg7	100	62.911	Poecilia_formosa
ENSCHIG00000018192	SMG7	99	60.776	ENSPLAG00000001446	smg7	100	60.611	Poecilia_latipinna
ENSCHIG00000018192	SMG7	97	60.120	ENSPMEG00000005218	smg7	99	59.949	Poecilia_mexicana
ENSCHIG00000018192	SMG7	87	59.868	ENSPREG00000019039	smg7	92	59.830	Poecilia_reticulata
ENSCHIG00000018192	SMG7	99	88.644	ENSPPYG00000000427	SMG7	99	88.644	Pongo_abelii
ENSCHIG00000018192	SMG7	95	84.594	ENSPCAG00000008360	SMG7	94	84.594	Procavia_capensis
ENSCHIG00000018192	SMG7	99	96.381	ENSPCOG00000011996	SMG7	97	96.381	Propithecus_coquereli
ENSCHIG00000018192	SMG7	91	91.154	ENSPVAG00000000851	SMG7	89	91.154	Pteropus_vampyrus
ENSCHIG00000018192	SMG7	99	64.575	ENSPNYG00000007643	smg7	100	64.822	Pundamilia_nyererei
ENSCHIG00000018192	SMG7	99	66.750	ENSPNAG00000011374	smg7	98	70.202	Pygocentrus_nattereri
ENSCHIG00000018192	SMG7	99	94.797	ENSRNOG00000027962	Smg7	100	95.370	Rattus_norvegicus
ENSCHIG00000018192	SMG7	99	96.470	ENSRBIG00000036316	SMG7	97	96.470	Rhinopithecus_bieti
ENSCHIG00000018192	SMG7	99	96.470	ENSRROG00000035719	SMG7	99	96.384	Rhinopithecus_roxellana
ENSCHIG00000018192	SMG7	99	96.120	ENSSBOG00000023454	SMG7	99	96.120	Saimiri_boliviensis_boliviensis
ENSCHIG00000018192	SMG7	99	84.720	ENSSHAG00000013147	SMG7	99	84.264	Sarcophilus_harrisii
ENSCHIG00000018192	SMG7	91	76.316	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSCHIG00000018192	SMG7	99	64.374	ENSSMAG00000006067	smg7	100	64.516	Scophthalmus_maximus
ENSCHIG00000018192	SMG7	95	71.905	ENSSDUG00000017543	smg7	100	62.029	Seriola_dumerili
ENSCHIG00000018192	SMG7	99	81.895	ENSSPUG00000002064	SMG7	99	81.810	Sphenodon_punctatus
ENSCHIG00000018192	SMG7	99	62.020	ENSSPAG00000008733	smg7	99	61.937	Stegastes_partitus
ENSCHIG00000018192	SMG7	99	97.264	ENSSSCG00000015558	SMG7	99	97.178	Sus_scrofa
ENSCHIG00000018192	SMG7	99	81.519	ENSTGUG00000003928	SMG7	100	81.519	Taeniopygia_guttata
ENSCHIG00000018192	SMG7	99	63.233	ENSTNIG00000002802	smg7	100	63.238	Tetraodon_nigroviridis
ENSCHIG00000018192	SMG7	77	95.763	ENSTBEG00000003220	SMG7	75	95.763	Tupaia_belangeri
ENSCHIG00000018192	SMG7	96	97.352	ENSTTRG00000014778	SMG7	94	97.352	Tursiops_truncatus
ENSCHIG00000018192	SMG7	96	92.539	ENSUAMG00000017473	SMG7	100	92.539	Ursus_americanus
ENSCHIG00000018192	SMG7	96	96.997	ENSUMAG00000016389	SMG7	100	96.997	Ursus_maritimus
ENSCHIG00000018192	SMG7	99	96.734	ENSVVUG00000008976	SMG7	99	96.649	Vulpes_vulpes
ENSCHIG00000018192	SMG7	99	65.698	ENSXETG00000012528	smg7	99	65.941	Xenopus_tropicalis
ENSCHIG00000018192	SMG7	99	60.794	ENSXMAG00000007123	smg7	100	60.959	Xiphophorus_maculatus