EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000018220 (Gene tree)
Gene ID: 100860753
Gene Symbol: RNASEH2B
Alias: -
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 74425 bases
Position: chr12:66177357-66251781
Accession: 100860753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000019081	RNase_H2-Ydr279	PF09468.10	5.6e-15	1	1
ENSCHIP00000019072	RNase_H2-Ydr279	PF09468.10	5.6e-15	1	1
ENSCHIP00000019058	RNase_H2-Ydr279	PF09468.10	8.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000026887	-	4753	XM_018056279	ENSCHIP00000019072	306 (aa)	XP_017911768	UPI0008478ECB
ENSCHIT00000026896	-	921	-	ENSCHIP00000019081	306 (aa)	-	UPI000D19117D
ENSCHIT00000026873	-	846	XM_018056281	ENSCHIP00000019058	281 (aa)	XP_017911770	UPI000D1941FA

Gene Model

Click here to download ENSCHIG00000018220's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000018220	RNASEH2B	78	82.773	ENSCHIG00000012982	-	84	82.773

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000018220	RNASEH2B	99	84.918	ENSG00000136104	RNASEH2B	100	91.011	Homo_sapiens
ENSCHIG00000018220	RNASEH2B	90	50.909	ENSAPOG00000010496	rnaseh2b	90	50.909	Acanthochromis_polyacanthus
ENSCHIG00000018220	RNASEH2B	94	83.562	ENSAMEG00000012040	RNASEH2B	99	83.562	Ailuropoda_melanoleuca
ENSCHIG00000018220	RNASEH2B	83	48.438	ENSACIG00000021991	rnaseh2b	97	48.515	Amphilophus_citrinellus
ENSCHIG00000018220	RNASEH2B	90	50.182	ENSAOCG00000013398	rnaseh2b	90	50.182	Amphiprion_ocellaris
ENSCHIG00000018220	RNASEH2B	90	49.818	ENSAPEG00000006033	rnaseh2b	90	49.818	Amphiprion_percula
ENSCHIG00000018220	RNASEH2B	93	51.049	ENSATEG00000008370	rnaseh2b	91	51.049	Anabas_testudineus
ENSCHIG00000018220	RNASEH2B	84	62.257	ENSAPLG00000008955	RNASEH2B	98	62.547	Anas_platyrhynchos
ENSCHIG00000018220	RNASEH2B	93	55.594	ENSACAG00000011679	RNASEH2B	97	55.401	Anolis_carolinensis
ENSCHIG00000018220	RNASEH2B	99	83.934	ENSANAG00000020662	RNASEH2B	99	83.934	Aotus_nancymaae
ENSCHIG00000018220	RNASEH2B	87	49.813	ENSACLG00000000467	rnaseh2b	87	49.813	Astatotilapia_calliptera
ENSCHIG00000018220	RNASEH2B	97	48.986	ENSAMXG00000014351	rnaseh2b	96	48.986	Astyanax_mexicanus
ENSCHIG00000018220	RNASEH2B	100	95.146	ENSBTAG00000020149	RNASEH2B	100	95.146	Bos_taurus
ENSCHIG00000018220	RNASEH2B	88	80.972	ENSCJAG00000003822	-	92	80.972	Callithrix_jacchus
ENSCHIG00000018220	RNASEH2B	98	84.385	ENSCJAG00000008585	-	99	84.385	Callithrix_jacchus
ENSCHIG00000018220	RNASEH2B	95	81.724	ENSCAFG00000004295	RNASEH2B	99	78.548	Canis_familiaris
ENSCHIG00000018220	RNASEH2B	99	81.639	ENSCAFG00020000250	RNASEH2B	99	81.639	Canis_lupus_dingo
ENSCHIG00000018220	RNASEH2B	94	83.681	ENSTSYG00000009176	-	94	83.681	Carlito_syrichta
ENSCHIG00000018220	RNASEH2B	97	72.054	ENSTSYG00000031177	-	98	72.054	Carlito_syrichta
ENSCHIG00000018220	RNASEH2B	92	75.000	ENSCAPG00000009978	RNASEH2B	96	75.439	Cavia_aperea
ENSCHIG00000018220	RNASEH2B	95	82.534	ENSCPOG00000032527	RNASEH2B	99	81.046	Cavia_porcellus
ENSCHIG00000018220	RNASEH2B	99	84.262	ENSCCAG00000026979	RNASEH2B	99	84.718	Cebus_capucinus
ENSCHIG00000018220	RNASEH2B	96	86.007	ENSCATG00000031336	RNASEH2B	83	86.007	Cercocebus_atys
ENSCHIG00000018220	RNASEH2B	92	83.039	ENSCLAG00000003517	RNASEH2B	78	83.039	Chinchilla_lanigera
ENSCHIG00000018220	RNASEH2B	97	84.385	ENSCSAG00000017701	RNASEH2B	91	84.385	Chlorocebus_sabaeus
ENSCHIG00000018220	RNASEH2B	100	66.019	ENSCHOG00000013688	RNASEH2B	100	66.019	Choloepus_hoffmanni
ENSCHIG00000018220	RNASEH2B	98	56.811	ENSCPBG00000008684	RNASEH2B	93	56.811	Chrysemys_picta_bellii
ENSCHIG00000018220	RNASEH2B	94	35.855	ENSCING00000016454	-	96	34.899	Ciona_intestinalis
ENSCHIG00000018220	RNASEH2B	99	84.740	ENSCANG00000041511	-	99	84.740	Colobus_angolensis_palliatus
ENSCHIG00000018220	RNASEH2B	99	82.237	ENSCGRG00001000611	Rnaseh2b	99	82.237	Cricetulus_griseus_chok1gshd
ENSCHIG00000018220	RNASEH2B	99	82.237	ENSCGRG00000006077	Rnaseh2b	99	82.237	Cricetulus_griseus_crigri
ENSCHIG00000018220	RNASEH2B	87	51.504	ENSCSEG00000004910	rnaseh2b	90	51.765	Cynoglossus_semilaevis
ENSCHIG00000018220	RNASEH2B	90	49.455	ENSCVAG00000005212	rnaseh2b	90	49.455	Cyprinodon_variegatus
ENSCHIG00000018220	RNASEH2B	97	47.811	ENSDARG00000005128	rnaseh2b	96	47.811	Danio_rerio
ENSCHIG00000018220	RNASEH2B	100	73.529	ENSDNOG00000034290	-	99	73.529	Dasypus_novemcinctus
ENSCHIG00000018220	RNASEH2B	92	76.596	ENSDNOG00000049666	-	92	76.596	Dasypus_novemcinctus
ENSCHIG00000018220	RNASEH2B	99	82.295	ENSDORG00000010708	Rnaseh2b	99	82.295	Dipodomys_ordii
ENSCHIG00000018220	RNASEH2B	84	39.147	ENSEBUG00000005965	rnaseh2b	98	39.922	Eptatretus_burgeri
ENSCHIG00000018220	RNASEH2B	99	86.230	ENSEASG00005017323	RNASEH2B	99	86.230	Equus_asinus_asinus
ENSCHIG00000018220	RNASEH2B	100	85.053	ENSECAG00000014262	RNASEH2B	100	85.053	Equus_caballus
ENSCHIG00000018220	RNASEH2B	97	47.157	ENSELUG00000019560	rnaseh2b	90	49.821	Esox_lucius
ENSCHIG00000018220	RNASEH2B	95	86.090	ENSFCAG00000014257	RNASEH2B	90	86.806	Felis_catus
ENSCHIG00000018220	RNASEH2B	90	58.123	ENSFALG00000008435	RNASEH2B	94	58.123	Ficedula_albicollis
ENSCHIG00000018220	RNASEH2B	92	82.686	ENSFDAG00000009920	RNASEH2B	99	82.686	Fukomys_damarensis
ENSCHIG00000018220	RNASEH2B	87	51.311	ENSFHEG00000012160	rnaseh2b	87	51.311	Fundulus_heteroclitus
ENSCHIG00000018220	RNASEH2B	83	49.425	ENSGMOG00000016830	rnaseh2b	90	49.425	Gadus_morhua
ENSCHIG00000018220	RNASEH2B	92	58.803	ENSGALG00000017015	RNASEH2B	95	59.184	Gallus_gallus
ENSCHIG00000018220	RNASEH2B	87	51.504	ENSGAFG00000021222	rnaseh2b	87	51.504	Gambusia_affinis
ENSCHIG00000018220	RNASEH2B	90	50.355	ENSGACG00000002821	rnaseh2b	90	50.355	Gasterosteus_aculeatus
ENSCHIG00000018220	RNASEH2B	88	60.595	ENSGAGG00000014722	RNASEH2B	96	60.595	Gopherus_agassizii
ENSCHIG00000018220	RNASEH2B	99	85.065	ENSGGOG00000001044	RNASEH2B	99	85.065	Gorilla_gorilla
ENSCHIG00000018220	RNASEH2B	87	50.187	ENSHBUG00000006049	rnaseh2b	89	50.588	Haplochromis_burtoni
ENSCHIG00000018220	RNASEH2B	93	83.451	ENSHGLG00100015953	RNASEH2B	97	83.451	Heterocephalus_glaber_male
ENSCHIG00000018220	RNASEH2B	87	48.327	ENSHCOG00000003318	rnaseh2b	85	52.263	Hippocampus_comes
ENSCHIG00000018220	RNASEH2B	97	49.329	ENSIPUG00000023815	rnaseh2b	96	49.329	Ictalurus_punctatus
ENSCHIG00000018220	RNASEH2B	92	85.512	ENSSTOG00000015126	RNASEH2B	97	85.512	Ictidomys_tridecemlineatus
ENSCHIG00000018220	RNASEH2B	95	80.345	ENSJJAG00000013335	Rnaseh2b	97	80.345	Jaculus_jaculus
ENSCHIG00000018220	RNASEH2B	90	51.087	ENSKMAG00000002198	rnaseh2b	90	51.087	Kryptolebias_marmoratus
ENSCHIG00000018220	RNASEH2B	90	53.455	ENSLBEG00000019331	rnaseh2b	87	54.511	Labrus_bergylta
ENSCHIG00000018220	RNASEH2B	68	57.346	ENSLACG00000010782	RNASEH2B	90	57.658	Latimeria_chalumnae
ENSCHIG00000018220	RNASEH2B	94	52.595	ENSLOCG00000009296	rnaseh2b	93	52.595	Lepisosteus_oculatus
ENSCHIG00000018220	RNASEH2B	98	76.159	ENSLAFG00000030158	RNASEH2B	98	76.159	Loxodonta_africana
ENSCHIG00000018220	RNASEH2B	99	85.197	ENSMFAG00000038464	-	98	85.197	Macaca_fascicularis
ENSCHIG00000018220	RNASEH2B	99	76.974	ENSMMUG00000021746	RNASEH2B	97	85.366	Macaca_mulatta
ENSCHIG00000018220	RNASEH2B	99	85.197	ENSMNEG00000030580	RNASEH2B	98	85.197	Macaca_nemestrina
ENSCHIG00000018220	RNASEH2B	99	84.365	ENSMLEG00000043911	-	98	84.365	Mandrillus_leucophaeus
ENSCHIG00000018220	RNASEH2B	87	53.160	ENSMAMG00000017109	rnaseh2b	87	53.160	Mastacembelus_armatus
ENSCHIG00000018220	RNASEH2B	85	49.808	ENSMZEG00005021926	rnaseh2b	86	49.808	Maylandia_zebra
ENSCHIG00000018220	RNASEH2B	88	58.456	ENSMGAG00000015025	RNASEH2B	98	58.865	Meleagris_gallopavo
ENSCHIG00000018220	RNASEH2B	99	80.921	ENSMAUG00000016520	Rnaseh2b	99	80.921	Mesocricetus_auratus
ENSCHIG00000018220	RNASEH2B	99	84.868	ENSMICG00000000528	RNASEH2B	99	84.868	Microcebus_murinus
ENSCHIG00000018220	RNASEH2B	87	52.256	ENSMMOG00000019799	rnaseh2b	93	52.256	Mola_mola
ENSCHIG00000018220	RNASEH2B	94	61.458	ENSMODG00000010775	RNASEH2B	94	61.458	Monodelphis_domestica
ENSCHIG00000018220	RNASEH2B	90	50.909	ENSMALG00000004463	rnaseh2b	90	50.909	Monopterus_albus
ENSCHIG00000018220	RNASEH2B	99	69.836	MGP_CAROLIEiJ_G0019389	Rnaseh2b	99	70.164	Mus_caroli
ENSCHIG00000018220	RNASEH2B	99	81.967	ENSMUSG00000021932	Rnaseh2b	99	82.295	Mus_musculus
ENSCHIG00000018220	RNASEH2B	99	64.162	MGP_PahariEiJ_G0030407	-	99	59.654	Mus_pahari
ENSCHIG00000018220	RNASEH2B	80	84.000	ENSMPUG00000018010	RNASEH2B	95	84.000	Mustela_putorius_furo
ENSCHIG00000018220	RNASEH2B	99	85.902	ENSMLUG00000004065	-	99	85.902	Myotis_lucifugus
ENSCHIG00000018220	RNASEH2B	87	50.186	ENSNBRG00000003253	rnaseh2b	88	49.630	Neolamprologus_brichardi
ENSCHIG00000018220	RNASEH2B	99	84.091	ENSNLEG00000003804	RNASEH2B	99	84.091	Nomascus_leucogenys
ENSCHIG00000018220	RNASEH2B	91	61.210	ENSMEUG00000003665	RNASEH2B	96	61.649	Notamacropus_eugenii
ENSCHIG00000018220	RNASEH2B	51	82.692	ENSOPRG00000003695	-	77	62.857	Ochotona_princeps
ENSCHIG00000018220	RNASEH2B	99	81.126	ENSODEG00000006793	-	98	81.126	Octodon_degus
ENSCHIG00000018220	RNASEH2B	87	73.770	ENSODEG00000005412	-	97	73.770	Octodon_degus
ENSCHIG00000018220	RNASEH2B	87	47.970	ENSONIG00000006657	rnaseh2b	87	49.064	Oreochromis_niloticus
ENSCHIG00000018220	RNASEH2B	91	63.509	ENSOANG00000015537	RNASEH2B	98	63.509	Ornithorhynchus_anatinus
ENSCHIG00000018220	RNASEH2B	100	83.333	ENSOCUG00000008904	RNASEH2B	97	83.333	Oryctolagus_cuniculus
ENSCHIG00000018220	RNASEH2B	93	50.699	ENSORLG00000011850	rnaseh2b	94	50.350	Oryzias_latipes
ENSCHIG00000018220	RNASEH2B	93	51.049	ENSORLG00020012081	rnaseh2b	94	50.699	Oryzias_latipes_hni
ENSCHIG00000018220	RNASEH2B	93	51.049	ENSORLG00015015468	rnaseh2b	94	50.699	Oryzias_latipes_hsok
ENSCHIG00000018220	RNASEH2B	93	48.951	ENSOMEG00000012441	rnaseh2b	94	48.601	Oryzias_melastigma
ENSCHIG00000018220	RNASEH2B	95	81.356	ENSOGAG00000016486	RNASEH2B	99	81.356	Otolemur_garnettii
ENSCHIG00000018220	RNASEH2B	93	98.944	ENSOARG00000008701	RNASEH2B	98	97.924	Ovis_aries
ENSCHIG00000018220	RNASEH2B	90	84.892	ENSPPAG00000026374	RNASEH2B	96	84.475	Pan_paniscus
ENSCHIG00000018220	RNASEH2B	98	85.197	ENSPPRG00000012450	RNASEH2B	99	85.197	Panthera_pardus
ENSCHIG00000018220	RNASEH2B	90	85.663	ENSPTIG00000013918	RNASEH2B	99	85.663	Panthera_tigris_altaica
ENSCHIG00000018220	RNASEH2B	99	84.416	ENSPTRG00000005886	RNASEH2B	98	85.612	Pan_troglodytes
ENSCHIG00000018220	RNASEH2B	99	84.365	ENSPANG00000022424	-	98	84.365	Papio_anubis
ENSCHIG00000018220	RNASEH2B	95	47.619	ENSPKIG00000013386	rnaseh2b	94	47.619	Paramormyrops_kingsleyae
ENSCHIG00000018220	RNASEH2B	64	54.144	ENSPSIG00000002224	RNASEH2B	84	54.144	Pelodiscus_sinensis
ENSCHIG00000018220	RNASEH2B	65	53.731	ENSPMGG00000010299	rnaseh2b	96	52.736	Periophthalmus_magnuspinnatus
ENSCHIG00000018220	RNASEH2B	99	81.908	ENSPEMG00000019721	Rnaseh2b	99	81.908	Peromyscus_maniculatus_bairdii
ENSCHIG00000018220	RNASEH2B	92	59.846	ENSPCIG00000014535	-	93	57.401	Phascolarctos_cinereus
ENSCHIG00000018220	RNASEH2B	87	52.416	ENSPFOG00000016722	rnaseh2b	87	52.416	Poecilia_formosa
ENSCHIG00000018220	RNASEH2B	87	52.809	ENSPLAG00000011755	rnaseh2b	87	52.809	Poecilia_latipinna
ENSCHIG00000018220	RNASEH2B	87	52.809	ENSPMEG00000002721	rnaseh2b	87	52.809	Poecilia_mexicana
ENSCHIG00000018220	RNASEH2B	87	52.809	ENSPREG00000007737	rnaseh2b	87	52.809	Poecilia_reticulata
ENSCHIG00000018220	RNASEH2B	99	84.091	ENSPPYG00000005378	RNASEH2B	99	83.442	Pongo_abelii
ENSCHIG00000018220	RNASEH2B	99	85.246	ENSPCOG00000026623	RNASEH2B	99	85.246	Propithecus_coquereli
ENSCHIG00000018220	RNASEH2B	89	82.609	ENSPVAG00000000508	RNASEH2B	100	78.598	Pteropus_vampyrus
ENSCHIG00000018220	RNASEH2B	87	50.187	ENSPNYG00000013552	rnaseh2b	89	50.588	Pundamilia_nyererei
ENSCHIG00000018220	RNASEH2B	87	51.311	ENSPNAG00000024825	rnaseh2b	86	51.311	Pygocentrus_nattereri
ENSCHIG00000018220	RNASEH2B	99	81.250	ENSRNOG00000009192	Rnaseh2b	99	81.250	Rattus_norvegicus
ENSCHIG00000018220	RNASEH2B	99	84.590	ENSRBIG00000028928	-	99	84.590	Rhinopithecus_bieti
ENSCHIG00000018220	RNASEH2B	92	74.468	ENSRBIG00000036017	-	93	74.468	Rhinopithecus_bieti
ENSCHIG00000018220	RNASEH2B	99	84.590	ENSRROG00000018808	-	99	84.590	Rhinopithecus_roxellana
ENSCHIG00000018220	RNASEH2B	91	66.926	ENSRROG00000044915	-	96	66.926	Rhinopithecus_roxellana
ENSCHIG00000018220	RNASEH2B	98	84.718	ENSSBOG00000008081	RNASEH2B	99	85.455	Saimiri_boliviensis_boliviensis
ENSCHIG00000018220	RNASEH2B	94	62.500	ENSSHAG00000016190	RNASEH2B	94	62.500	Sarcophilus_harrisii
ENSCHIG00000018220	RNASEH2B	90	50.903	ENSSFOG00015010190	rnaseh2b	90	50.903	Scleropages_formosus
ENSCHIG00000018220	RNASEH2B	87	51.685	ENSSMAG00000001546	rnaseh2b	87	51.685	Scophthalmus_maximus
ENSCHIG00000018220	RNASEH2B	90	51.636	ENSSDUG00000007567	rnaseh2b	90	51.636	Seriola_dumerili
ENSCHIG00000018220	RNASEH2B	94	48.443	ENSSLDG00000012485	rnaseh2b	96	48.443	Seriola_lalandi_dorsalis
ENSCHIG00000018220	RNASEH2B	84	58.462	ENSSPUG00000006745	-	94	58.462	Sphenodon_punctatus
ENSCHIG00000018220	RNASEH2B	90	51.273	ENSSPAG00000020926	rnaseh2b	90	51.273	Stegastes_partitus
ENSCHIG00000018220	RNASEH2B	98	86.232	ENSSSCG00000024385	RNASEH2B	99	89.091	Sus_scrofa
ENSCHIG00000018220	RNASEH2B	87	59.551	ENSTGUG00000012104	RNASEH2B	98	59.551	Taeniopygia_guttata
ENSCHIG00000018220	RNASEH2B	88	52.941	ENSTRUG00000015098	rnaseh2b	87	53.558	Takifugu_rubripes
ENSCHIG00000018220	RNASEH2B	87	52.239	ENSTNIG00000013861	rnaseh2b	87	52.239	Tetraodon_nigroviridis
ENSCHIG00000018220	RNASEH2B	92	83.916	ENSTTRG00000010761	RNASEH2B	98	80.519	Tursiops_truncatus
ENSCHIG00000018220	RNASEH2B	93	85.263	ENSUAMG00000022849	RNASEH2B	99	85.766	Ursus_americanus
ENSCHIG00000018220	RNASEH2B	93	84.912	ENSUMAG00000018556	RNASEH2B	99	85.401	Ursus_maritimus
ENSCHIG00000018220	RNASEH2B	92	90.493	ENSVPAG00000005679	RNASEH2B	99	90.493	Vicugna_pacos
ENSCHIG00000018220	RNASEH2B	93	83.099	ENSVVUG00000024015	RNASEH2B	85	83.099	Vulpes_vulpes
ENSCHIG00000018220	RNASEH2B	98	53.488	ENSXETG00000020720	rnaseh2b	98	52.492	Xenopus_tropicalis
ENSCHIG00000018220	RNASEH2B	87	51.685	ENSXCOG00000018732	rnaseh2b	88	50.958	Xiphophorus_couchianus
ENSCHIG00000018220	RNASEH2B	87	52.256	ENSXMAG00000022554	rnaseh2b	87	52.256	Xiphophorus_maculatus