EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000018658 (Gene tree)
Gene ID: 102174995
Gene Symbol: -
Alias: -
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 11502 bases
Position: chr25:10419526-10431027
Accession: 102174995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000019757	Ribosomal_L1	PF00687.21	4.1e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000027574	-	1455	XM_018040471	ENSCHIP00000019757	484 (aa)	XP_017895960	UPI000D191A4A

Gene Model

Click here to download ENSCHIG00000018658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018658's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000018658	-	99	86.542	ENSCHIG00000009867	-	99	86.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000018658	-	95	64.957	ENSG00000171490	RSL1D1	100	81.633	Homo_sapiens
ENSCHIG00000018658	-	94	71.030	ENSAMEG00000009570	RSL1D1	99	70.732	Ailuropoda_melanoleuca
ENSCHIG00000018658	-	50	45.417	ENSACIG00000006608	rsl1d1	74	45.417	Amphilophus_citrinellus
ENSCHIG00000018658	-	51	48.996	ENSAOCG00000001548	rsl1d1	91	41.114	Amphiprion_ocellaris
ENSCHIG00000018658	-	51	48.996	ENSAPEG00000003334	rsl1d1	91	40.000	Amphiprion_percula
ENSCHIG00000018658	-	88	43.280	ENSAPLG00000004451	RSL1D1	96	42.212	Anas_platyrhynchos
ENSCHIG00000018658	-	94	61.242	ENSANAG00000028185	-	99	60.729	Aotus_nancymaae
ENSCHIG00000018658	-	94	65.806	ENSANAG00000034590	-	99	63.273	Aotus_nancymaae
ENSCHIG00000018658	-	99	58.788	ENSANAG00000026520	-	96	59.034	Aotus_nancymaae
ENSCHIG00000018658	-	77	39.791	ENSAMXG00000008624	rsl1d1	98	39.747	Astyanax_mexicanus
ENSCHIG00000018658	-	99	93.789	ENSBTAG00000014588	RSL1D1	99	93.789	Bos_taurus
ENSCHIG00000018658	-	91	65.256	ENSCJAG00000008375	-	97	64.768	Callithrix_jacchus
ENSCHIG00000018658	-	91	65.625	ENSCJAG00000042606	-	98	64.842	Callithrix_jacchus
ENSCHIG00000018658	-	96	71.610	ENSCAFG00000018865	RSL1D1	99	71.545	Canis_familiaris
ENSCHIG00000018658	-	88	57.968	ENSCAFG00020002457	-	94	57.792	Canis_lupus_dingo
ENSCHIG00000018658	-	99	70.732	ENSCAFG00020024488	-	99	70.325	Canis_lupus_dingo
ENSCHIG00000018658	-	99	61.290	ENSTSYG00000009276	RSL1D1	99	59.557	Carlito_syrichta
ENSCHIG00000018658	-	100	60.619	ENSCPOG00000010630	RSL1D1	95	62.473	Cavia_porcellus
ENSCHIG00000018658	-	99	55.131	ENSCCAG00000025197	-	99	58.144	Cebus_capucinus
ENSCHIG00000018658	-	99	62.753	ENSCCAG00000017391	-	99	62.124	Cebus_capucinus
ENSCHIG00000018658	-	100	58.586	ENSCCAG00000031641	-	97	59.305	Cebus_capucinus
ENSCHIG00000018658	-	95	57.862	ENSCATG00000031153	RSL1D1	96	59.579	Cercocebus_atys
ENSCHIG00000018658	-	99	60.950	ENSCLAG00000010975	RSL1D1	95	63.261	Chinchilla_lanigera
ENSCHIG00000018658	-	93	64.410	ENSCSAG00000008255	RSL1D1	99	65.051	Chlorocebus_sabaeus
ENSCHIG00000018658	-	81	69.896	ENSCHOG00000010827	RSL1D1	76	71.326	Choloepus_hoffmanni
ENSCHIG00000018658	-	93	65.217	ENSCANG00000029202	RSL1D1	99	65.657	Colobus_angolensis_palliatus
ENSCHIG00000018658	-	99	53.498	ENSCGRG00001014989	Rsl1d1	99	52.653	Cricetulus_griseus_chok1gshd
ENSCHIG00000018658	-	99	53.498	ENSCGRG00000001905	Rsl1d1	99	52.653	Cricetulus_griseus_crigri
ENSCHIG00000018658	-	50	48.963	ENSCSEG00000019693	rsl1d1	92	38.542	Cynoglossus_semilaevis
ENSCHIG00000018658	-	60	46.735	ENSCVAG00000000672	rsl1d1	83	41.228	Cyprinodon_variegatus
ENSCHIG00000018658	-	52	45.200	ENSDARG00000055868	rsl1d1	95	37.778	Danio_rerio
ENSCHIG00000018658	-	95	61.602	ENSDNOG00000040779	-	94	63.441	Dasypus_novemcinctus
ENSCHIG00000018658	-	69	52.023	ENSDNOG00000047567	-	99	50.867	Dasypus_novemcinctus
ENSCHIG00000018658	-	97	60.729	ENSDNOG00000004601	-	94	63.656	Dasypus_novemcinctus
ENSCHIG00000018658	-	97	49.895	ENSDORG00000013432	-	98	50.316	Dipodomys_ordii
ENSCHIG00000018658	-	93	72.727	ENSEASG00005011499	RSL1D1	98	70.935	Equus_asinus_asinus
ENSCHIG00000018658	-	93	71.861	ENSECAG00000025036	RSL1D1	98	69.715	Equus_caballus
ENSCHIG00000018658	-	75	83.871	ENSEEUG00000015569	-	79	83.871	Erinaceus_europaeus
ENSCHIG00000018658	-	77	40.533	ENSELUG00000019243	rsl1d1	87	45.525	Esox_lucius
ENSCHIG00000018658	-	99	68.839	ENSFCAG00000010114	RSL1D1	99	68.548	Felis_catus
ENSCHIG00000018658	-	93	43.261	ENSFALG00000003869	RSL1D1	96	42.706	Ficedula_albicollis
ENSCHIG00000018658	-	99	57.438	ENSFDAG00000011414	RSL1D1	99	57.350	Fukomys_damarensis
ENSCHIG00000018658	-	53	47.451	ENSFHEG00000017235	rsl1d1	74	45.865	Fundulus_heteroclitus
ENSCHIG00000018658	-	51	54.251	ENSGALG00000033690	RSL1D1	99	41.239	Gallus_gallus
ENSCHIG00000018658	-	62	44.667	ENSGACG00000004483	rsl1d1	70	48.148	Gasterosteus_aculeatus
ENSCHIG00000018658	-	95	64.530	ENSGGOG00000013463	RSL1D1	99	64.694	Gorilla_gorilla
ENSCHIG00000018658	-	99	57.231	ENSHGLG00000006774	RSL1D1	94	58.952	Heterocephalus_glaber_female
ENSCHIG00000018658	-	100	57.113	ENSHGLG00100017781	RSL1D1	95	58.824	Heterocephalus_glaber_male
ENSCHIG00000018658	-	51	48.178	ENSIPUG00000001677	rsl1d1	89	39.628	Ictalurus_punctatus
ENSCHIG00000018658	-	87	63.333	ENSSTOG00000015400	RSL1D1	99	63.333	Ictidomys_tridecemlineatus
ENSCHIG00000018658	-	92	54.036	ENSJJAG00000012115	Rsl1d1	99	54.274	Jaculus_jaculus
ENSCHIG00000018658	-	50	48.333	ENSKMAG00000021908	rsl1d1	89	39.344	Kryptolebias_marmoratus
ENSCHIG00000018658	-	50	46.250	ENSLBEG00000001076	rsl1d1	68	46.250	Labrus_bergylta
ENSCHIG00000018658	-	50	49.180	ENSLOCG00000007416	rsl1d1	97	37.953	Lepisosteus_oculatus
ENSCHIG00000018658	-	94	63.020	ENSLAFG00000013664	RSL1D1	96	62.272	Loxodonta_africana
ENSCHIG00000018658	-	96	65.263	ENSMFAG00000037288	RSL1D1	100	65.927	Macaca_fascicularis
ENSCHIG00000018658	-	99	65.041	ENSMMUG00000019632	RSL1D1	99	80.255	Macaca_mulatta
ENSCHIG00000018658	-	96	65.053	ENSMNEG00000044196	RSL1D1	100	65.726	Macaca_nemestrina
ENSCHIG00000018658	-	95	65.466	ENSMLEG00000042058	RSL1D1	100	65.524	Mandrillus_leucophaeus
ENSCHIG00000018658	-	88	43.023	ENSMGAG00000000863	RSL1D1	98	41.304	Meleagris_gallopavo
ENSCHIG00000018658	-	100	59.557	ENSMICG00000008229	RSL1D1	100	59.155	Microcebus_murinus
ENSCHIG00000018658	-	83	59.057	ENSMOCG00000017724	Rsl1d1	89	57.353	Microtus_ochrogaster
ENSCHIG00000018658	-	53	41.473	ENSMMOG00000003730	rsl1d1	78	45.957	Mola_mola
ENSCHIG00000018658	-	93	47.732	ENSMODG00000004625	-	99	47.425	Monodelphis_domestica
ENSCHIG00000018658	-	83	40.821	ENSMODG00000029494	-	86	41.063	Monodelphis_domestica
ENSCHIG00000018658	-	97	54.298	ENSMUSG00000005846	Rsl1d1	92	54.967	Mus_musculus
ENSCHIG00000018658	-	99	52.965	MGP_PahariEiJ_G0016164	Rsl1d1	99	52.846	Mus_pahari
ENSCHIG00000018658	-	97	54.298	MGP_SPRETEiJ_G0021352	Rsl1d1	92	54.305	Mus_spretus
ENSCHIG00000018658	-	95	70.231	ENSMPUG00000014548	RSL1D1	99	68.410	Mustela_putorius_furo
ENSCHIG00000018658	-	99	68.737	ENSMLUG00000000784	RSL1D1	99	68.136	Myotis_lucifugus
ENSCHIG00000018658	-	93	60.356	ENSNGAG00000009086	-	94	60.222	Nannospalax_galili
ENSCHIG00000018658	-	93	58.444	ENSNGAG00000013578	-	98	58.057	Nannospalax_galili
ENSCHIG00000018658	-	71	65.254	ENSNLEG00000012149	-	93	64.917	Nomascus_leucogenys
ENSCHIG00000018658	-	93	66.377	ENSNLEG00000010196	-	99	66.263	Nomascus_leucogenys
ENSCHIG00000018658	-	100	60.905	ENSOPRG00000004442	-	100	60.905	Ochotona_princeps
ENSCHIG00000018658	-	87	42.759	ENSOANG00000009408	-	99	42.759	Ornithorhynchus_anatinus
ENSCHIG00000018658	-	96	62.955	ENSOCUG00000004751	RSL1D1	99	62.500	Oryctolagus_cuniculus
ENSCHIG00000018658	-	57	44.643	ENSORLG00020006636	rsl1d1	77	45.725	Oryzias_latipes_hni
ENSCHIG00000018658	-	57	44.643	ENSORLG00015005427	rsl1d1	77	45.725	Oryzias_latipes_hsok
ENSCHIG00000018658	-	99	62.146	ENSOGAG00000015151	RSL1D1	99	62.475	Otolemur_garnettii
ENSCHIG00000018658	-	99	96.894	ENSOARG00000006923	RSL1D1	99	96.894	Ovis_aries
ENSCHIG00000018658	-	95	64.957	ENSPPAG00000039716	RSL1D1	99	65.173	Pan_paniscus
ENSCHIG00000018658	-	96	69.851	ENSPPRG00000005220	RSL1D1	99	69.355	Panthera_pardus
ENSCHIG00000018658	-	93	69.281	ENSPTIG00000005526	RSL1D1	94	69.935	Panthera_tigris_altaica
ENSCHIG00000018658	-	95	64.744	ENSPTRG00000007777	RSL1D1	99	64.969	Pan_troglodytes
ENSCHIG00000018658	-	95	65.254	ENSPANG00000023073	RSL1D1	100	64.919	Papio_anubis
ENSCHIG00000018658	-	50	44.167	ENSPKIG00000022687	rsl1d1	64	44.167	Paramormyrops_kingsleyae
ENSCHIG00000018658	-	81	44.332	ENSPSIG00000011642	RSL1D1	99	42.405	Pelodiscus_sinensis
ENSCHIG00000018658	-	99	53.484	ENSPEMG00000009523	Rsl1d1	95	53.092	Peromyscus_maniculatus_bairdii
ENSCHIG00000018658	-	80	48.969	ENSPCIG00000026851	-	88	49.485	Phascolarctos_cinereus
ENSCHIG00000018658	-	53	49.412	ENSPFOG00000005017	rsl1d1	92	42.075	Poecilia_formosa
ENSCHIG00000018658	-	53	49.020	ENSPLAG00000000482	rsl1d1	58	50.628	Poecilia_latipinna
ENSCHIG00000018658	-	53	49.020	ENSPMEG00000007032	rsl1d1	65	50.628	Poecilia_mexicana
ENSCHIG00000018658	-	95	56.803	ENSPPYG00000019335	-	95	56.077	Pongo_abelii
ENSCHIG00000018658	-	94	65.451	ENSPPYG00000007112	RSL1D1	99	64.766	Pongo_abelii
ENSCHIG00000018658	-	82	69.697	ENSPCAG00000011264	-	83	69.697	Procavia_capensis
ENSCHIG00000018658	-	72	56.944	ENSPCOG00000022456	RSL1D1	99	56.104	Propithecus_coquereli
ENSCHIG00000018658	-	99	69.371	ENSPVAG00000005014	RSL1D1	99	68.675	Pteropus_vampyrus
ENSCHIG00000018658	-	76	39.837	ENSPNAG00000011848	rsl1d1	89	39.295	Pygocentrus_nattereri
ENSCHIG00000018658	-	93	54.846	ENSRNOG00000061236	LOC108348298	91	54.505	Rattus_norvegicus
ENSCHIG00000018658	-	93	54.846	ENSRNOG00000048608	Rsl1d1l1	91	54.505	Rattus_norvegicus
ENSCHIG00000018658	-	94	65.665	ENSRBIG00000030317	RSL1D1	99	66.061	Rhinopithecus_bieti
ENSCHIG00000018658	-	95	65.106	ENSRROG00000033658	RSL1D1	99	65.455	Rhinopithecus_roxellana
ENSCHIG00000018658	-	98	60.124	ENSSBOG00000028384	-	99	59.229	Saimiri_boliviensis_boliviensis
ENSCHIG00000018658	-	99	49.595	ENSSBOG00000029329	-	99	48.600	Saimiri_boliviensis_boliviensis
ENSCHIG00000018658	-	94	65.236	ENSSBOG00000035910	-	99	62.948	Saimiri_boliviensis_boliviensis
ENSCHIG00000018658	-	50	50.617	ENSSFOG00015011354	rsl1d1	70	50.617	Scleropages_formosus
ENSCHIG00000018658	-	76	34.704	ENSSMAG00000007957	rsl1d1	67	47.009	Scophthalmus_maximus
ENSCHIG00000018658	-	94	42.766	ENSSPUG00000007525	RSL1D1	98	41.949	Sphenodon_punctatus
ENSCHIG00000018658	-	52	48.000	ENSSPAG00000009755	rsl1d1	92	40.426	Stegastes_partitus
ENSCHIG00000018658	-	94	79.060	ENSSSCG00000023984	RSL1D1	99	76.316	Sus_scrofa
ENSCHIG00000018658	-	51	57.959	ENSTGUG00000005174	RSL1D1	99	57.959	Taeniopygia_guttata
ENSCHIG00000018658	-	50	46.748	ENSTRUG00000016970	rsl1d1	68	47.107	Takifugu_rubripes
ENSCHIG00000018658	-	50	47.521	ENSTNIG00000012925	rsl1d1	68	47.521	Tetraodon_nigroviridis
ENSCHIG00000018658	-	83	55.147	ENSTBEG00000014678	RSL1D1	99	55.422	Tupaia_belangeri
ENSCHIG00000018658	-	95	82.609	ENSTTRG00000011629	RSL1D1	99	82.025	Tursiops_truncatus
ENSCHIG00000018658	-	94	71.674	ENSUAMG00000004470	RSL1D1	99	71.138	Ursus_americanus
ENSCHIG00000018658	-	87	65.359	ENSUMAG00000003994	RSL1D1	99	65.359	Ursus_maritimus
ENSCHIG00000018658	-	96	71.398	ENSVVUG00000018170	-	99	70.624	Vulpes_vulpes
ENSCHIG00000018658	-	94	62.446	ENSVVUG00000024962	-	96	61.992	Vulpes_vulpes
ENSCHIG00000018658	-	94	44.259	ENSXETG00000033365	-	97	45.303	Xenopus_tropicalis
ENSCHIG00000018658	-	52	47.826	ENSXMAG00000025111	rsl1d1	70	48.571	Xiphophorus_maculatus