EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000018727 (Gene tree)
Gene ID: 102178554
Gene Symbol: MRPS28
Alias: HSPC007|MRP-S28|MRPS35
Full Name: mitochondrial ribosomal protein S28
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 102551 bases
Position: chr14:38822186-38924736
Accession: 102178554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000019873	MRP-S35	PF10246.9	4e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000027696	MRPS28-201	567	XM_005689121	ENSCHIP00000019873	188 (aa)	XP_005689178	UPI0003AFC46E

Gene Model

Click here to download ENSCHIG00000018727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000018727	MRPS28	100	83.511	ENSG00000147586	MRPS28	100	92.233	Homo_sapiens
ENSCHIG00000018727	MRPS28	61	90.435	ENSAMEG00000017516	MRPS28	100	90.435	Ailuropoda_melanoleuca
ENSCHIG00000018727	MRPS28	73	58.865	ENSACIG00000007839	mrps28	80	59.574	Amphilophus_citrinellus
ENSCHIG00000018727	MRPS28	73	58.571	ENSAOCG00000000705	mrps28	81	58.571	Amphiprion_ocellaris
ENSCHIG00000018727	MRPS28	73	57.746	ENSAPEG00000016051	mrps28	81	57.746	Amphiprion_percula
ENSCHIG00000018727	MRPS28	85	61.728	ENSATEG00000015295	mrps28	76	67.143	Anabas_testudineus
ENSCHIG00000018727	MRPS28	57	85.981	ENSAPLG00000005666	MRPS28	100	85.981	Anas_platyrhynchos
ENSCHIG00000018727	MRPS28	55	60.577	ENSACLG00000003892	mrps28	90	60.577	Astatotilapia_calliptera
ENSCHIG00000018727	MRPS28	80	63.576	ENSAMXG00000026324	mrps28	74	66.429	Astyanax_mexicanus
ENSCHIG00000018727	MRPS28	100	95.745	ENSBTAG00000001302	MRPS28	99	95.745	Bos_taurus
ENSCHIG00000018727	MRPS28	55	48.544	WBGene00012830	mrps-28	60	48.544	Caenorhabditis_elegans
ENSCHIG00000018727	MRPS28	96	83.978	ENSCAFG00000008393	MRPS28	100	83.978	Canis_familiaris
ENSCHIG00000018727	MRPS28	96	83.978	ENSCAFG00020017987	MRPS28	100	83.978	Canis_lupus_dingo
ENSCHIG00000018727	MRPS28	100	74.468	ENSTSYG00000031343	-	100	74.468	Carlito_syrichta
ENSCHIG00000018727	MRPS28	70	80.303	ENSTSYG00000013531	-	100	78.030	Carlito_syrichta
ENSCHIG00000018727	MRPS28	56	84.762	ENSCAPG00000006948	-	95	84.762	Cavia_aperea
ENSCHIG00000018727	MRPS28	56	85.714	ENSCPOG00000031885	-	95	85.714	Cavia_porcellus
ENSCHIG00000018727	MRPS28	100	80.851	ENSCCAG00000022534	MRPS28	100	80.851	Cebus_capucinus
ENSCHIG00000018727	MRPS28	50	91.489	ENSCLAG00000003227	-	95	87.619	Chinchilla_lanigera
ENSCHIG00000018727	MRPS28	100	81.915	ENSCHOG00000004885	MRPS28	100	81.915	Choloepus_hoffmanni
ENSCHIG00000018727	MRPS28	74	70.000	ENSCPBG00000007206	MRPS28	64	74.803	Chrysemys_picta_bellii
ENSCHIG00000018727	MRPS28	100	78.723	ENSCGRG00001018741	Mrps28	100	78.723	Cricetulus_griseus_chok1gshd
ENSCHIG00000018727	MRPS28	61	88.696	ENSCGRG00000018208	Mrps28	99	88.696	Cricetulus_griseus_crigri
ENSCHIG00000018727	MRPS28	55	66.990	ENSCSEG00000020947	mrps28	97	66.990	Cynoglossus_semilaevis
ENSCHIG00000018727	MRPS28	64	49.587	ENSCVAG00000007159	mrps28	99	49.587	Cyprinodon_variegatus
ENSCHIG00000018727	MRPS28	94	56.111	ENSDARG00000041538	mrps28	73	67.424	Danio_rerio
ENSCHIG00000018727	MRPS28	99	82.888	ENSDNOG00000017379	-	60	82.888	Dasypus_novemcinctus
ENSCHIG00000018727	MRPS28	100	77.660	ENSDORG00000002762	Mrps28	100	77.660	Dipodomys_ordii
ENSCHIG00000018727	MRPS28	86	41.615	FBgn0034361	mRpS28	69	46.043	Drosophila_melanogaster
ENSCHIG00000018727	MRPS28	93	56.000	ENSEBUG00000010846	mrps28	73	65.385	Eptatretus_burgeri
ENSCHIG00000018727	MRPS28	100	88.830	ENSEASG00005020574	MRPS28	100	88.830	Equus_asinus_asinus
ENSCHIG00000018727	MRPS28	100	88.830	ENSECAG00000015430	MRPS28	100	88.830	Equus_caballus
ENSCHIG00000018727	MRPS28	71	85.821	ENSECAG00000030797	-	83	85.821	Equus_caballus
ENSCHIG00000018727	MRPS28	71	85.821	ENSECAG00000036837	-	80	85.821	Equus_caballus
ENSCHIG00000018727	MRPS28	94	59.322	ENSEEUG00000013471	MRPS28	97	59.322	Erinaceus_europaeus
ENSCHIG00000018727	MRPS28	65	48.031	ENSELUG00000023151	mrps28	52	62.667	Esox_lucius
ENSCHIG00000018727	MRPS28	99	89.305	ENSFCAG00000032510	MRPS28	100	89.305	Felis_catus
ENSCHIG00000018727	MRPS28	56	84.762	ENSFALG00000008608	MRPS28	80	84.762	Ficedula_albicollis
ENSCHIG00000018727	MRPS28	100	78.191	ENSFDAG00000013634	MRPS28	97	78.191	Fukomys_damarensis
ENSCHIG00000018727	MRPS28	58	53.211	ENSFHEG00000006233	mrps28	82	53.211	Fundulus_heteroclitus
ENSCHIG00000018727	MRPS28	70	50.000	ENSGAFG00000014759	mrps28	73	50.360	Gambusia_affinis
ENSCHIG00000018727	MRPS28	81	56.774	ENSGACG00000019939	mrps28	76	60.417	Gasterosteus_aculeatus
ENSCHIG00000018727	MRPS28	74	70.714	ENSGAGG00000025904	MRPS28	63	84.259	Gopherus_agassizii
ENSCHIG00000018727	MRPS28	55	61.165	ENSHBUG00000014315	mrps28	88	61.165	Haplochromis_burtoni
ENSCHIG00000018727	MRPS28	100	82.979	ENSHGLG00000009986	MRPS28	81	82.979	Heterocephalus_glaber_female
ENSCHIG00000018727	MRPS28	100	82.979	ENSHGLG00100019258	MRPS28	81	82.979	Heterocephalus_glaber_male
ENSCHIG00000018727	MRPS28	71	53.285	ENSHCOG00000011561	mrps28	71	55.200	Hippocampus_comes
ENSCHIG00000018727	MRPS28	80	60.390	ENSIPUG00000012566	mrps28	74	64.706	Ictalurus_punctatus
ENSCHIG00000018727	MRPS28	71	84.962	ENSSTOG00000015179	MRPS28	100	84.962	Ictidomys_tridecemlineatus
ENSCHIG00000018727	MRPS28	87	62.195	ENSJJAG00000023759	Mrps28	84	61.585	Jaculus_jaculus
ENSCHIG00000018727	MRPS28	96	55.738	ENSKMAG00000006636	mrps28	73	64.493	Kryptolebias_marmoratus
ENSCHIG00000018727	MRPS28	97	57.812	ENSLACG00000014702	MRPS28	69	72.180	Latimeria_chalumnae
ENSCHIG00000018727	MRPS28	97	58.247	ENSLOCG00000017359	mrps28	72	70.000	Lepisosteus_oculatus
ENSCHIG00000018727	MRPS28	55	60.577	ENSMZEG00005010529	-	90	60.577	Maylandia_zebra
ENSCHIG00000018727	MRPS28	55	60.577	ENSMZEG00005014997	mrps28	90	60.577	Maylandia_zebra
ENSCHIG00000018727	MRPS28	55	85.577	ENSMGAG00000011622	MRPS28	100	85.577	Meleagris_gallopavo
ENSCHIG00000018727	MRPS28	100	78.723	ENSMAUG00000009465	Mrps28	100	78.723	Mesocricetus_auratus
ENSCHIG00000018727	MRPS28	100	87.766	ENSMICG00000044873	MRPS28	100	87.766	Microcebus_murinus
ENSCHIG00000018727	MRPS28	100	80.319	ENSMOCG00000021930	Mrps28	100	80.319	Microtus_ochrogaster
ENSCHIG00000018727	MRPS28	97	70.492	ENSMODG00000006621	MRPS28	97	70.492	Monodelphis_domestica
ENSCHIG00000018727	MRPS28	59	69.369	ENSMALG00000006494	mrps28	83	70.000	Monopterus_albus
ENSCHIG00000018727	MRPS28	100	78.191	MGP_CAROLIEiJ_G0024833	Mrps28	100	78.191	Mus_caroli
ENSCHIG00000018727	MRPS28	100	77.660	ENSMUSG00000040269	Mrps28	100	77.660	Mus_musculus
ENSCHIG00000018727	MRPS28	100	75.532	MGP_PahariEiJ_G0026281	Mrps28	100	75.532	Mus_pahari
ENSCHIG00000018727	MRPS28	100	77.660	MGP_SPRETEiJ_G0025763	Mrps28	100	77.660	Mus_spretus
ENSCHIG00000018727	MRPS28	99	88.235	ENSMPUG00000001853	MRPS28	100	88.235	Mustela_putorius_furo
ENSCHIG00000018727	MRPS28	99	83.957	ENSMLUG00000015175	MRPS28	100	83.957	Myotis_lucifugus
ENSCHIG00000018727	MRPS28	100	78.191	ENSNGAG00000000216	Mrps28	100	78.191	Nannospalax_galili
ENSCHIG00000018727	MRPS28	97	47.312	ENSNBRG00000021393	mrps28	78	52.206	Neolamprologus_brichardi
ENSCHIG00000018727	MRPS28	98	70.652	ENSMEUG00000007676	MRPS28	100	69.355	Notamacropus_eugenii
ENSCHIG00000018727	MRPS28	98	84.324	ENSODEG00000005701	MRPS28	98	84.324	Octodon_degus
ENSCHIG00000018727	MRPS28	71	52.899	ENSONIG00000020758	mrps28	78	52.899	Oreochromis_niloticus
ENSCHIG00000018727	MRPS28	94	81.921	ENSOCUG00000000867	MRPS28	99	81.921	Oryctolagus_cuniculus
ENSCHIG00000018727	MRPS28	79	54.194	ENSORLG00000026843	mrps28	78	56.835	Oryzias_latipes
ENSCHIG00000018727	MRPS28	79	54.839	ENSORLG00020022089	mrps28	78	57.554	Oryzias_latipes_hni
ENSCHIG00000018727	MRPS28	71	54.478	ENSOMEG00000008250	mrps28	76	54.478	Oryzias_melastigma
ENSCHIG00000018727	MRPS28	100	86.702	ENSOGAG00000016599	MRPS28	100	86.702	Otolemur_garnettii
ENSCHIG00000018727	MRPS28	99	89.840	ENSPPRG00000009220	MRPS28	100	89.840	Panthera_pardus
ENSCHIG00000018727	MRPS28	99	89.305	ENSPTIG00000019934	MRPS28	100	89.305	Panthera_tigris_altaica
ENSCHIG00000018727	MRPS28	60	74.561	ENSPKIG00000022304	mrps28	91	74.561	Paramormyrops_kingsleyae
ENSCHIG00000018727	MRPS28	91	47.399	ENSPMGG00000008007	-	69	58.065	Periophthalmus_magnuspinnatus
ENSCHIG00000018727	MRPS28	100	77.660	ENSPEMG00000012338	Mrps28	100	77.660	Peromyscus_maniculatus_bairdii
ENSCHIG00000018727	MRPS28	54	77.451	ENSPMAG00000002015	mrps28	91	77.451	Petromyzon_marinus
ENSCHIG00000018727	MRPS28	98	68.649	ENSPCIG00000026795	MRPS28	99	68.649	Phascolarctos_cinereus
ENSCHIG00000018727	MRPS28	99	46.316	ENSPFOG00000020828	mrps28	77	51.429	Poecilia_formosa
ENSCHIG00000018727	MRPS28	99	46.316	ENSPLAG00000005387	mrps28	77	51.429	Poecilia_latipinna
ENSCHIG00000018727	MRPS28	91	49.133	ENSPMEG00000022332	mrps28	72	56.098	Poecilia_mexicana
ENSCHIG00000018727	MRPS28	80	49.351	ENSPREG00000005690	mrps28	78	50.714	Poecilia_reticulata
ENSCHIG00000018727	MRPS28	100	80.851	ENSPPYG00000018694	MRPS28	100	80.851	Pongo_abelii
ENSCHIG00000018727	MRPS28	62	92.241	ENSPCAG00000000404	MRPS28	100	92.241	Procavia_capensis
ENSCHIG00000018727	MRPS28	100	87.234	ENSPCOG00000003866	MRPS28	100	87.234	Propithecus_coquereli
ENSCHIG00000018727	MRPS28	98	84.324	ENSPVAG00000007815	MRPS28	99	84.324	Pteropus_vampyrus
ENSCHIG00000018727	MRPS28	55	60.577	ENSPNYG00000016499	mrps28	90	60.577	Pundamilia_nyererei
ENSCHIG00000018727	MRPS28	71	64.336	ENSPNAG00000018621	mrps28	77	64.336	Pygocentrus_nattereri
ENSCHIG00000018727	MRPS28	100	78.191	ENSRNOG00000032630	Mrps28	99	78.191	Rattus_norvegicus
ENSCHIG00000018727	MRPS28	100	80.851	ENSSBOG00000028198	MRPS28	100	80.851	Saimiri_boliviensis_boliviensis
ENSCHIG00000018727	MRPS28	89	55.866	ENSSFOG00015004723	mrps28	74	61.745	Scleropages_formosus
ENSCHIG00000018727	MRPS28	72	58.993	ENSSMAG00000021042	mrps28	75	63.077	Scophthalmus_maximus
ENSCHIG00000018727	MRPS28	89	56.471	ENSSDUG00000021722	mrps28	93	56.471	Seriola_dumerili
ENSCHIG00000018727	MRPS28	68	61.832	ENSSLDG00000013261	mrps28	76	59.859	Seriola_lalandi_dorsalis
ENSCHIG00000018727	MRPS28	100	77.128	ENSSARG00000007429	MRPS28	99	77.128	Sorex_araneus
ENSCHIG00000018727	MRPS28	88	55.952	ENSSPUG00000017502	MRPS28	68	73.913	Sphenodon_punctatus
ENSCHIG00000018727	MRPS28	71	58.088	ENSSPAG00000003194	mrps28	78	58.088	Stegastes_partitus
ENSCHIG00000018727	MRPS28	100	90.957	ENSSSCG00000037782	MRPS28	100	90.957	Sus_scrofa
ENSCHIG00000018727	MRPS28	92	51.445	ENSTRUG00000012758	mrps28	68	62.602	Takifugu_rubripes
ENSCHIG00000018727	MRPS28	100	80.319	ENSTBEG00000010380	MRPS28	100	80.319	Tupaia_belangeri
ENSCHIG00000018727	MRPS28	100	88.298	ENSTTRG00000000087	MRPS28	100	88.298	Tursiops_truncatus
ENSCHIG00000018727	MRPS28	99	85.561	ENSUAMG00000018127	MRPS28	100	85.561	Ursus_americanus
ENSCHIG00000018727	MRPS28	99	85.561	ENSUMAG00000014927	MRPS28	100	85.561	Ursus_maritimus
ENSCHIG00000018727	MRPS28	100	89.362	ENSVPAG00000000652	MRPS28	100	89.362	Vicugna_pacos
ENSCHIG00000018727	MRPS28	96	84.530	ENSVVUG00000000384	MRPS28	100	84.530	Vulpes_vulpes
ENSCHIG00000018727	MRPS28	63	56.198	ENSXCOG00000015251	mrps28	65	57.258	Xiphophorus_couchianus