EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCHIG00000018772 (Gene tree)
Gene ID
102189934
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Plus strand
Length
259445 bases
Position
chr6:4844551-5103995
Accession
102189934
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6319
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6329
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6339
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6349
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6359
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6369
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6379
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6389
ENSCHIP00000019964zf-C2H2PF00096.261.2e-6399
ENSCHIP00000019973zf-C2H2PF00096.269e-6019
ENSCHIP00000019973zf-C2H2PF00096.269e-6029
ENSCHIP00000019973zf-C2H2PF00096.269e-6039
ENSCHIP00000019973zf-C2H2PF00096.269e-6049
ENSCHIP00000019973zf-C2H2PF00096.269e-6059
ENSCHIP00000019973zf-C2H2PF00096.269e-6069
ENSCHIP00000019973zf-C2H2PF00096.269e-6079
ENSCHIP00000019973zf-C2H2PF00096.269e-6089
ENSCHIP00000019973zf-C2H2PF00096.269e-6099
ENSCHIP00000019964zf-metPF12874.71.3e-2414
ENSCHIP00000019964zf-metPF12874.71.3e-2424
ENSCHIP00000019964zf-metPF12874.71.3e-2434
ENSCHIP00000019964zf-metPF12874.71.3e-2444
ENSCHIP00000019973zf-metPF12874.79.8e-2213
ENSCHIP00000019973zf-metPF12874.79.8e-2223
ENSCHIP00000019973zf-metPF12874.79.8e-2233
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000027797PRDM5-2021800XM_018049170ENSCHIP00000019973599 (aa)XP_017904659UPI000D19528A
ENSCHIT00000027788PRDM5-2013102XM_018049168ENSCHIP00000019964617 (aa)XP_017904657UPI0008465C29
Gene Model
Click here to download ENSCHIG00000018772's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018772's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCHIG00000018772PRDM57538.988ENSCHIG00000014415ZNF817438.988
ENSCHIG00000018772PRDM59042.353ENSCHIG00000025005PRDM126942.353
ENSCHIG00000018772PRDM59736.134ENSCHIG00000009297PRDM145336.134
ENSCHIG00000018772PRDM57738.663ENSCHIG00000015741-8638.663
ENSCHIG00000018772PRDM57537.349ENSCHIG00000016562-7435.612
ENSCHIG00000018772PRDM58437.778ENSCHIG00000020931-8440.306
ENSCHIG00000018772PRDM57537.975ENSCHIG00000012252ZNF8658031.633
ENSCHIG00000018772PRDM57540.909ENSCHIG00000027113ZNF6998140.909
ENSCHIG00000018772PRDM58537.450ENSCHIG00000025346ZNF4087037.450
ENSCHIG00000018772PRDM58235.171ENSCHIG00000015369ZNF3178135.171
ENSCHIG00000018772PRDM57731.733ENSCHIG00000003371ZNF3198632.905
ENSCHIG00000018772PRDM57443.750ENSCHIG00000021099ZNF328143.750
ENSCHIG00000018772PRDM57541.004ENSCHIG00000015281ZFP16939.431
ENSCHIG00000018772PRDM57538.696ENSCHIG00000015070ZNF2267539.721
ENSCHIG00000018772PRDM57437.685ENSCHIG00000014937ZNF2357137.685
ENSCHIG00000018772PRDM57438.851ENSCHIG00000016463-6538.851
ENSCHIG00000018772PRDM57138.539ENSCHIG00000027072ZNF1127238.539
ENSCHIG00000018772PRDM57536.876ENSCHIG00000008992-9237.376
ENSCHIG00000018772PRDM57537.690ENSCHIG00000026481-8437.690
ENSCHIG00000018772PRDM57541.304ENSCHIG00000023988ZNF7685445.588
ENSCHIG00000018772PRDM58145.794ENSCHIG00000000391ZNF2367745.794
ENSCHIG00000018772PRDM57430.797ENSCHIG00000018756ZNF5268931.522
ENSCHIG00000018772PRDM57636.453ENSCHIG00000020779-8336.603
ENSCHIG00000018772PRDM57441.615ENSCHIG00000022075ZNF6286041.615
ENSCHIG00000018772PRDM57930.504ENSCHIG00000009605ZNF5748630.504
ENSCHIG00000018772PRDM57440.800ENSCHIG00000012483ZNF26937.200
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000018772PRDM510096.160ENSG00000138738PRDM510096.160Homo_sapiens
ENSCHIG00000018772PRDM510079.700ENSAPOG00000023220prdm510079.700Acanthochromis_polyacanthus
ENSCHIG00000018772PRDM59189.062ENSAMEG00000003050PRDM510089.236Ailuropoda_melanoleuca
ENSCHIG00000018772PRDM510078.667ENSACIG00000000406prdm510078.667Amphilophus_citrinellus
ENSCHIG00000018772PRDM510080.500ENSAOCG00000014806prdm510080.500Amphiprion_ocellaris
ENSCHIG00000018772PRDM510071.337ENSAPEG00000016846prdm510072.464Amphiprion_percula
ENSCHIG00000018772PRDM510080.500ENSATEG00000013829prdm510080.667Anabas_testudineus
ENSCHIG00000018772PRDM59583.389ENSAPLG00000013828PRDM510083.389Anas_platyrhynchos
ENSCHIG00000018772PRDM510078.571ENSACAG00000012999PRDM510078.571Anolis_carolinensis
ENSCHIG00000018772PRDM510097.785ENSANAG00000027411PRDM510097.785Aotus_nancymaae
ENSCHIG00000018772PRDM510080.833ENSACLG00000017996prdm510080.833Astatotilapia_calliptera
ENSCHIG00000018772PRDM58578.409ENSAMXG00000041864prdm59978.598Astyanax_mexicanus
ENSCHIG00000018772PRDM510096.667ENSBTAG00000012111PRDM510096.667Bos_taurus
ENSCHIG00000018772PRDM510097.785ENSCJAG00000003133PRDM510097.785Callithrix_jacchus
ENSCHIG00000018772PRDM59186.079ENSCAFG00000004179PRDM510084.483Canis_familiaris
ENSCHIG00000018772PRDM510096.494ENSCAFG00020017685PRDM510096.494Canis_lupus_dingo
ENSCHIG00000018772PRDM59594.942ENSTSYG00000009630PRDM59494.942Carlito_syrichta
ENSCHIG00000018772PRDM59096.000ENSCAPG00000015217PRDM510096.000Cavia_aperea
ENSCHIG00000018772PRDM59597.468ENSCPOG00000012883PRDM510097.468Cavia_porcellus
ENSCHIG00000018772PRDM510098.101ENSCCAG00000023157PRDM510098.101Cebus_capucinus
ENSCHIG00000018772PRDM510098.418ENSCATG00000042510PRDM510098.418Cercocebus_atys
ENSCHIG00000018772PRDM59597.468ENSCLAG00000005392PRDM510097.468Chinchilla_lanigera
ENSCHIG00000018772PRDM510095.993ENSCSAG00000003729PRDM510095.993Chlorocebus_sabaeus
ENSCHIG00000018772PRDM59991.324ENSCHOG00000007801PRDM59188.000Choloepus_hoffmanni
ENSCHIG00000018772PRDM510082.473ENSCPBG00000024735PRDM510082.473Chrysemys_picta_bellii
ENSCHIG00000018772PRDM510098.418ENSCANG00000036807PRDM510098.418Colobus_angolensis_palliatus
ENSCHIG00000018772PRDM510096.203ENSCGRG00001010581Prdm510096.203Cricetulus_griseus_chok1gshd
ENSCHIG00000018772PRDM59583.888ENSCGRG00000010996-9983.888Cricetulus_griseus_crigri
ENSCHIG00000018772PRDM510080.167ENSCSEG00000019979prdm510080.167Cynoglossus_semilaevis
ENSCHIG00000018772PRDM510075.806ENSCVAG00000013692prdm510075.806Cyprinodon_variegatus
ENSCHIG00000018772PRDM510077.057ENSDARG00000006288prdm510077.057Danio_rerio
ENSCHIG00000018772PRDM59193.565ENSDNOG00000002009PRDM510093.565Dasypus_novemcinctus
ENSCHIG00000018772PRDM510096.835ENSDORG00000007739Prdm510096.835Dipodomys_ordii
ENSCHIG00000018772PRDM59492.105ENSETEG00000020268PRDM58892.105Echinops_telfairi
ENSCHIG00000018772PRDM59971.237ENSEBUG00000004301prdm510071.739Eptatretus_burgeri
ENSCHIG00000018772PRDM510098.734ENSEASG00005018365PRDM510098.734Equus_asinus_asinus
ENSCHIG00000018772PRDM59996.296ENSECAG00000011516PRDM58996.296Equus_caballus
ENSCHIG00000018772PRDM510072.036ENSECAG00000024747-10084.356Equus_caballus
ENSCHIG00000018772PRDM59986.458ENSEEUG00000010306PRDM510086.458Erinaceus_europaeus
ENSCHIG00000018772PRDM59976.895ENSELUG00000005894prdm59376.895Esox_lucius
ENSCHIG00000018772PRDM510096.494ENSFCAG00000025656PRDM510096.494Felis_catus
ENSCHIG00000018772PRDM59977.882ENSFALG00000008381PRDM510077.882Ficedula_albicollis
ENSCHIG00000018772PRDM510097.785ENSFDAG00000021361PRDM510097.785Fukomys_damarensis
ENSCHIG00000018772PRDM510080.833ENSFHEG00000013040prdm510080.833Fundulus_heteroclitus
ENSCHIG00000018772PRDM59469.079ENSGMOG00000012038prdm510069.079Gadus_morhua
ENSCHIG00000018772PRDM510083.570ENSGALG00000011963PRDM510083.570Gallus_gallus
ENSCHIG00000018772PRDM59978.519ENSGAFG00000019233prdm510077.333Gambusia_affinis
ENSCHIG00000018772PRDM59981.034ENSGAGG00000020362PRDM59981.034Gopherus_agassizii
ENSCHIG00000018772PRDM510098.418ENSGGOG00000013562PRDM510098.418Gorilla_gorilla
ENSCHIG00000018772PRDM510080.500ENSHBUG00000023375prdm510080.833Haplochromis_burtoni
ENSCHIG00000018772PRDM510085.977ENSHGLG00000003010PRDM510089.649Heterocephalus_glaber_female
ENSCHIG00000018772PRDM510097.468ENSHGLG00100003696PRDM510097.468Heterocephalus_glaber_male
ENSCHIG00000018772PRDM510079.294ENSHCOG00000012131prdm510079.327Hippocampus_comes
ENSCHIG00000018772PRDM510080.167ENSIPUG00000001248prdm510080.667Ictalurus_punctatus
ENSCHIG00000018772PRDM59593.671ENSSTOG00000004741PRDM510093.671Ictidomys_tridecemlineatus
ENSCHIG00000018772PRDM59596.835ENSJJAG00000011464Prdm510096.835Jaculus_jaculus
ENSCHIG00000018772PRDM510080.667ENSKMAG00000013663prdm510080.667Kryptolebias_marmoratus
ENSCHIG00000018772PRDM510079.710ENSLBEG00000022736prdm510080.032Labrus_bergylta
ENSCHIG00000018772PRDM59182.118ENSLACG00000009187PRDM59982.292Latimeria_chalumnae
ENSCHIG00000018772PRDM510080.000ENSLOCG00000009778prdm59980.000Lepisosteus_oculatus
ENSCHIG00000018772PRDM510096.661ENSLAFG00000006532PRDM510096.661Loxodonta_africana
ENSCHIG00000018772PRDM510098.418ENSMFAG00000045845PRDM510098.418Macaca_fascicularis
ENSCHIG00000018772PRDM510098.418ENSMMUG00000003249PRDM510098.418Macaca_mulatta
ENSCHIG00000018772PRDM510098.418ENSMNEG00000019018PRDM510098.418Macaca_nemestrina
ENSCHIG00000018772PRDM59595.951ENSMLEG00000023145PRDM510095.951Mandrillus_leucophaeus
ENSCHIG00000018772PRDM510079.871ENSMAMG00000013419prdm510079.871Mastacembelus_armatus
ENSCHIG00000018772PRDM510080.500ENSMZEG00005020645prdm510080.833Maylandia_zebra
ENSCHIG00000018772PRDM59583.056ENSMGAG00000010710PRDM510083.056Meleagris_gallopavo
ENSCHIG00000018772PRDM510096.203ENSMAUG00000006768Prdm510096.203Mesocricetus_auratus
ENSCHIG00000018772PRDM510097.468ENSMICG00000001459PRDM510097.468Microcebus_murinus
ENSCHIG00000018772PRDM510096.203ENSMOCG00000016267Prdm510096.203Microtus_ochrogaster
ENSCHIG00000018772PRDM510080.833ENSMMOG00000006035prdm510080.833Mola_mola
ENSCHIG00000018772PRDM510079.589ENSMODG00000018942PRDM510079.589Monodelphis_domestica
ENSCHIG00000018772PRDM510077.500ENSMALG00000013934prdm510077.500Monopterus_albus
ENSCHIG00000018772PRDM510096.519MGP_CAROLIEiJ_G0028463Prdm510096.519Mus_caroli
ENSCHIG00000018772PRDM510096.203ENSMUSG00000029913Prdm510096.203Mus_musculus
ENSCHIG00000018772PRDM510096.519MGP_PahariEiJ_G0022203Prdm510096.519Mus_pahari
ENSCHIG00000018772PRDM510096.203MGP_SPRETEiJ_G0029467Prdm510096.203Mus_spretus
ENSCHIG00000018772PRDM510093.968ENSMPUG00000017415PRDM510093.968Mustela_putorius_furo
ENSCHIG00000018772PRDM59184.256ENSMLUG00000006097PRDM510084.256Myotis_lucifugus
ENSCHIG00000018772PRDM510096.835ENSNGAG00000018317Prdm510096.835Nannospalax_galili
ENSCHIG00000018772PRDM510071.921ENSNBRG00000004976prdm510076.910Neolamprologus_brichardi
ENSCHIG00000018772PRDM510098.418ENSNLEG00000009107PRDM510098.418Nomascus_leucogenys
ENSCHIG00000018772PRDM58589.831ENSMEUG00000006576-7189.831Notamacropus_eugenii
ENSCHIG00000018772PRDM59595.817ENSOPRG00000011066-8973.805Ochotona_princeps
ENSCHIG00000018772PRDM59997.785ENSODEG00000009133PRDM510097.785Octodon_degus
ENSCHIG00000018772PRDM510078.981ENSONIG00000003111prdm59978.981Oreochromis_niloticus
ENSCHIG00000018772PRDM55686.667ENSOANG00000006197-10086.667Ornithorhynchus_anatinus
ENSCHIG00000018772PRDM59981.725ENSOANG00000015109PRDM59781.725Ornithorhynchus_anatinus
ENSCHIG00000018772PRDM59386.712ENSOCUG00000013454PRDM510088.075Oryctolagus_cuniculus
ENSCHIG00000018772PRDM510080.667ENSORLG00000016247prdm510081.000Oryzias_latipes
ENSCHIG00000018772PRDM510080.833ENSORLG00020018051prdm510080.833Oryzias_latipes_hni
ENSCHIG00000018772PRDM510080.667ENSORLG00015013760prdm510081.000Oryzias_latipes_hsok
ENSCHIG00000018772PRDM510080.865ENSOMEG00000005143prdm510081.198Oryzias_melastigma
ENSCHIG00000018772PRDM58485.876ENSOGAG00000009996PRDM59885.421Otolemur_garnettii
ENSCHIG00000018772PRDM59499.440ENSOARG00000015473PRDM510096.718Ovis_aries
ENSCHIG00000018772PRDM59595.914ENSPPAG00000043045PRDM510095.914Pan_paniscus
ENSCHIG00000018772PRDM510096.494ENSPPRG00000001020PRDM510096.494Panthera_pardus
ENSCHIG00000018772PRDM59596.127ENSPTIG00000010807PRDM59596.127Panthera_tigris_altaica
ENSCHIG00000018772PRDM510098.418ENSPTRG00000016403PRDM510098.418Pan_troglodytes
ENSCHIG00000018772PRDM510098.418ENSPANG00000023612PRDM510098.418Papio_anubis
ENSCHIG00000018772PRDM59454.821ENSPKIG00000015492prdm510052.875Paramormyrops_kingsleyae
ENSCHIG00000018772PRDM510083.254ENSPSIG00000013505PRDM510083.254Pelodiscus_sinensis
ENSCHIG00000018772PRDM510076.333ENSPMGG00000012622prdm510077.667Periophthalmus_magnuspinnatus
ENSCHIG00000018772PRDM57571.359ENSPMAG00000005248prdm510071.359Petromyzon_marinus
ENSCHIG00000018772PRDM59970.640ENSPFOG00000018630prdm59976.471Poecilia_formosa
ENSCHIG00000018772PRDM510080.000ENSPLAG00000014148prdm510080.000Poecilia_latipinna
ENSCHIG00000018772PRDM510081.167ENSPMEG00000018002prdm510081.167Poecilia_mexicana
ENSCHIG00000018772PRDM510081.167ENSPREG00000018366prdm510081.167Poecilia_reticulata
ENSCHIG00000018772PRDM510094.444ENSPPYG00000015031PRDM510094.444Pongo_abelii
ENSCHIG00000018772PRDM59587.980ENSPCAG00000011671PRDM510087.980Procavia_capensis
ENSCHIG00000018772PRDM510097.468ENSPCOG00000022828PRDM510097.468Propithecus_coquereli
ENSCHIG00000018772PRDM59587.813ENSPVAG00000012309PRDM510087.813Pteropus_vampyrus
ENSCHIG00000018772PRDM510080.833ENSPNYG00000012194prdm510080.833Pundamilia_nyererei
ENSCHIG00000018772PRDM510080.500ENSPNAG00000026181prdm510081.167Pygocentrus_nattereri
ENSCHIG00000018772PRDM59374.703ENSPNAG00000023191-10074.703Pygocentrus_nattereri
ENSCHIG00000018772PRDM59988.869ENSRNOG00000023679Prdm59988.869Rattus_norvegicus
ENSCHIG00000018772PRDM510098.418ENSRBIG00000041307PRDM510098.418Rhinopithecus_bieti
ENSCHIG00000018772PRDM59483.645ENSRROG00000035343PRDM510084.859Rhinopithecus_roxellana
ENSCHIG00000018772PRDM510098.101ENSSBOG00000022100PRDM510098.101Saimiri_boliviensis_boliviensis
ENSCHIG00000018772PRDM59077.869ENSSHAG00000003250PRDM510077.869Sarcophilus_harrisii
ENSCHIG00000018772PRDM510076.375ENSSFOG00015020478prdm510076.375Scleropages_formosus
ENSCHIG00000018772PRDM510081.167ENSSMAG00000018844prdm510081.167Scophthalmus_maximus
ENSCHIG00000018772PRDM510080.667ENSSDUG00000020397prdm510081.000Seriola_dumerili
ENSCHIG00000018772PRDM510080.667ENSSLDG00000013353prdm510081.000Seriola_lalandi_dorsalis
ENSCHIG00000018772PRDM59397.436ENSSARG00000014129-6897.436Sorex_araneus
ENSCHIG00000018772PRDM510089.557ENSSPUG00000009941PRDM510089.557Sphenodon_punctatus
ENSCHIG00000018772PRDM510079.839ENSSPAG00000013866prdm510080.000Stegastes_partitus
ENSCHIG00000018772PRDM510097.162ENSSSCG00000009101PRDM510097.162Sus_scrofa
ENSCHIG00000018772PRDM59583.639ENSTGUG00000001920PRDM510083.639Taeniopygia_guttata
ENSCHIG00000018772PRDM510080.167ENSTRUG00000013850prdm510080.167Takifugu_rubripes
ENSCHIG00000018772PRDM510065.724ENSTNIG00000005901prdm510065.724Tetraodon_nigroviridis
ENSCHIG00000018772PRDM59587.945ENSTBEG00000015386PRDM58687.945Tupaia_belangeri
ENSCHIG00000018772PRDM510094.762ENSTTRG00000010996PRDM510094.762Tursiops_truncatus
ENSCHIG00000018772PRDM59597.436ENSUAMG00000009994PRDM58495.267Ursus_americanus
ENSCHIG00000018772PRDM59598.734ENSUMAG00000003733PRDM59998.734Ursus_maritimus
ENSCHIG00000018772PRDM59785.458ENSVPAG00000007435PRDM510085.458Vicugna_pacos
ENSCHIG00000018772PRDM59394.208ENSVVUG00000013192PRDM510094.208Vulpes_vulpes
ENSCHIG00000018772PRDM510078.447ENSXETG00000002101prdm510078.447Xenopus_tropicalis
ENSCHIG00000018772PRDM510080.667ENSXCOG00000008567prdm510081.500Xiphophorus_couchianus
ENSCHIG00000018772PRDM510080.667ENSXMAG00000013825prdm510081.500Xiphophorus_maculatus

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