EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000018805 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 5573 bases
Position: chr1:106981406-106986978
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000020015	Ribosomal_S18	PF01084.20	6.7e-12	1	1
ENSCHIP00000020009	Ribosomal_S18	PF01084.20	9.8e-12	1	1
ENSCHIP00000020019	Ribosomal_S18	PF01084.20	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000027833	-	402	-	ENSCHIP00000020009	133 (aa)	-	UPI000D1930EA
ENSCHIT00000027839	-	408	-	ENSCHIP00000020015	135 (aa)	-	UPI000D197C50
ENSCHIT00000027842	-	414	-	ENSCHIP00000020019	137 (aa)	-	UPI000D191556

Gene Model

Click here to download ENSCHIG00000018805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000018805	-	99	45.833	ENSCHIG00000016551	-	99	45.833
ENSCHIG00000018805	-	99	63.504	ENSCHIG00000022740	-	98	63.504
ENSCHIG00000018805	-	78	66.972	ENSCHIG00000019359	-	98	66.972
ENSCHIG00000018805	-	93	68.531	ENSCHIG00000004461	-	100	68.531

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000018805	-	99	67.606	ENSG00000163319	MRPS18C	99	67.606	Homo_sapiens
ENSCHIG00000018805	-	99	63.309	ENSAMEG00000004915	MRPS18C	99	63.309	Ailuropoda_melanoleuca
ENSCHIG00000018805	-	99	56.944	ENSANAG00000028055	-	99	56.944	Aotus_nancymaae
ENSCHIG00000018805	-	99	57.047	ENSANAG00000025323	-	94	57.047	Aotus_nancymaae
ENSCHIG00000018805	-	99	65.957	ENSBTAG00000018155	MRPS18C	97	69.565	Bos_taurus
ENSCHIG00000018805	-	99	48.936	ENSBTAG00000049836	-	99	48.252	Bos_taurus
ENSCHIG00000018805	-	99	67.361	ENSCJAG00000042247	MRPS18C	96	67.361	Callithrix_jacchus
ENSCHIG00000018805	-	99	64.539	ENSCAFG00020010491	MRPS18C	99	64.539	Canis_lupus_dingo
ENSCHIG00000018805	-	100	65.734	ENSTSYG00000012924	MRPS18C	100	65.734	Carlito_syrichta
ENSCHIG00000018805	-	99	64.789	ENSCPOG00000009198	MRPS18C	99	64.789	Cavia_porcellus
ENSCHIG00000018805	-	99	68.750	ENSCCAG00000026577	-	99	68.750	Cebus_capucinus
ENSCHIG00000018805	-	98	56.429	ENSCCAG00000025155	-	98	55.782	Cebus_capucinus
ENSCHIG00000018805	-	100	63.768	ENSCCAG00000028283	-	99	63.768	Cebus_capucinus
ENSCHIG00000018805	-	98	68.571	ENSCCAG00000019347	-	99	67.361	Cebus_capucinus
ENSCHIG00000018805	-	99	67.606	ENSCATG00000040697	MRPS18C	99	67.606	Cercocebus_atys
ENSCHIG00000018805	-	100	62.329	ENSCLAG00000008205	-	100	62.329	Chinchilla_lanigera
ENSCHIG00000018805	-	100	63.889	ENSCLAG00000017397	-	100	63.889	Chinchilla_lanigera
ENSCHIG00000018805	-	99	63.971	ENSCANG00000041165	-	99	63.971	Colobus_angolensis_palliatus
ENSCHIG00000018805	-	99	67.606	ENSCANG00000038907	MRPS18C	99	67.606	Colobus_angolensis_palliatus
ENSCHIG00000018805	-	99	50.704	ENSCANG00000037347	-	97	50.704	Colobus_angolensis_palliatus
ENSCHIG00000018805	-	99	64.085	ENSCGRG00001000103	Mrps18c	99	64.085	Cricetulus_griseus_chok1gshd
ENSCHIG00000018805	-	99	64.085	ENSCGRG00000002192	Mrps18c	99	64.085	Cricetulus_griseus_crigri
ENSCHIG00000018805	-	99	62.676	ENSDORG00000012749	Mrps18c	100	62.676	Dipodomys_ordii
ENSCHIG00000018805	-	99	43.662	ENSETEG00000012223	-	99	43.662	Echinops_telfairi
ENSCHIG00000018805	-	99	70.629	ENSEASG00005013234	MRPS18C	99	70.629	Equus_asinus_asinus
ENSCHIG00000018805	-	99	71.329	ENSECAG00000020387	MRPS18C	99	71.329	Equus_caballus
ENSCHIG00000018805	-	98	47.887	ENSEEUG00000003504	MRPS18C	99	47.887	Erinaceus_europaeus
ENSCHIG00000018805	-	99	65.734	ENSFCAG00000042464	MRPS18C	99	65.734	Felis_catus
ENSCHIG00000018805	-	99	64.029	ENSFDAG00000000250	-	99	64.029	Fukomys_damarensis
ENSCHIG00000018805	-	99	59.701	ENSFDAG00000008778	-	95	63.281	Fukomys_damarensis
ENSCHIG00000018805	-	99	50.704	ENSGGOG00000040785	-	98	50.704	Gorilla_gorilla
ENSCHIG00000018805	-	98	44.286	ENSGGOG00000037903	-	99	42.657	Gorilla_gorilla
ENSCHIG00000018805	-	99	54.745	ENSGGOG00000008603	MRPS18C	99	54.745	Gorilla_gorilla
ENSCHIG00000018805	-	99	65.972	ENSHGLG00000002953	-	99	65.972	Heterocephalus_glaber_female
ENSCHIG00000018805	-	99	59.859	ENSHGLG00000012671	-	97	59.028	Heterocephalus_glaber_female
ENSCHIG00000018805	-	99	66.901	ENSHGLG00000020134	-	99	66.901	Heterocephalus_glaber_female
ENSCHIG00000018805	-	99	66.901	ENSHGLG00100019678	-	99	66.901	Heterocephalus_glaber_male
ENSCHIG00000018805	-	99	65.972	ENSHGLG00100016235	-	99	65.972	Heterocephalus_glaber_male
ENSCHIG00000018805	-	99	59.859	ENSHGLG00100015568	-	97	59.028	Heterocephalus_glaber_male
ENSCHIG00000018805	-	99	68.750	ENSSTOG00000007989	MRPS18C	99	68.750	Ictidomys_tridecemlineatus
ENSCHIG00000018805	-	67	52.128	ENSJJAG00000022437	Mrps18c	97	52.128	Jaculus_jaculus
ENSCHIG00000018805	-	100	70.139	ENSLAFG00000001059	MRPS18C	100	70.139	Loxodonta_africana
ENSCHIG00000018805	-	99	66.901	ENSMFAG00000003991	MRPS18C	99	66.901	Macaca_fascicularis
ENSCHIG00000018805	-	99	52.817	ENSMFAG00000041276	-	98	52.817	Macaca_fascicularis
ENSCHIG00000018805	-	99	59.155	ENSMMUG00000039146	-	98	59.155	Macaca_mulatta
ENSCHIG00000018805	-	98	63.571	ENSMMUG00000048717	-	98	63.830	Macaca_mulatta
ENSCHIG00000018805	-	99	52.113	ENSMMUG00000015353	MRPS18C	99	52.083	Macaca_mulatta
ENSCHIG00000018805	-	99	54.348	ENSMNEG00000018700	-	98	54.348	Macaca_nemestrina
ENSCHIG00000018805	-	99	66.901	ENSMNEG00000043663	MRPS18C	99	66.901	Macaca_nemestrina
ENSCHIG00000018805	-	99	67.606	ENSMLEG00000038884	MRPS18C	99	67.606	Mandrillus_leucophaeus
ENSCHIG00000018805	-	99	65.972	ENSMICG00000032609	-	99	65.972	Microcebus_murinus
ENSCHIG00000018805	-	99	50.000	ENSMICG00000037615	-	99	50.350	Microcebus_murinus
ENSCHIG00000018805	-	99	61.268	ENSMOCG00000015591	-	99	61.268	Microtus_ochrogaster
ENSCHIG00000018805	-	99	60.563	ENSMOCG00000009898	-	99	60.563	Microtus_ochrogaster
ENSCHIG00000018805	-	92	59.701	ENSMODG00000020773	MRPS18C	97	58.696	Monodelphis_domestica
ENSCHIG00000018805	-	99	62.329	MGP_CAROLIEiJ_G0027458	Mrps18c	99	62.329	Mus_caroli
ENSCHIG00000018805	-	99	61.644	ENSMUSG00000016833	Mrps18c	99	61.644	Mus_musculus
ENSCHIG00000018805	-	99	63.014	MGP_PahariEiJ_G0017236	Mrps18c	99	63.014	Mus_pahari
ENSCHIG00000018805	-	77	63.303	MGP_SPRETEiJ_G0028455	Mrps18c	83	63.303	Mus_spretus
ENSCHIG00000018805	-	94	65.441	ENSMLUG00000017057	MRPS18C	97	63.768	Myotis_lucifugus
ENSCHIG00000018805	-	86	66.935	ENSNGAG00000015980	Mrps18c	100	62.238	Nannospalax_galili
ENSCHIG00000018805	-	100	65.734	ENSNLEG00000018188	-	99	65.734	Nomascus_leucogenys
ENSCHIG00000018805	-	99	68.310	ENSNLEG00000009119	MRPS18C	99	68.310	Nomascus_leucogenys
ENSCHIG00000018805	-	68	65.957	ENSOPRG00000004113	MRPS18C	66	65.957	Ochotona_princeps
ENSCHIG00000018805	-	100	63.014	ENSODEG00000007599	-	100	63.014	Octodon_degus
ENSCHIG00000018805	-	100	64.583	ENSODEG00000020349	-	100	64.583	Octodon_degus
ENSCHIG00000018805	-	99	67.376	ENSOARG00000002770	MRPS18C	99	67.376	Ovis_aries
ENSCHIG00000018805	-	99	67.606	ENSPPAG00000037122	MRPS18C	99	67.606	Pan_paniscus
ENSCHIG00000018805	-	98	45.000	ENSPPAG00000037400	-	97	44.681	Pan_paniscus
ENSCHIG00000018805	-	99	65.734	ENSPPRG00000011089	MRPS18C	99	65.734	Panthera_pardus
ENSCHIG00000018805	-	99	65.035	ENSPTIG00000021242	MRPS18C	99	65.035	Panthera_tigris_altaica
ENSCHIG00000018805	-	98	44.286	ENSPTRG00000047058	-	97	43.972	Pan_troglodytes
ENSCHIG00000018805	-	99	67.606	ENSPTRG00000016233	MRPS18C	99	67.606	Pan_troglodytes
ENSCHIG00000018805	-	99	67.606	ENSPANG00000033931	MRPS18C	99	67.606	Papio_anubis
ENSCHIG00000018805	-	99	59.155	ENSPANG00000034202	-	98	59.155	Papio_anubis
ENSCHIG00000018805	-	100	61.538	ENSPEMG00000008390	Mrps18c	99	61.538	Peromyscus_maniculatus_bairdii
ENSCHIG00000018805	-	99	57.343	ENSPCIG00000005376	-	100	57.343	Phascolarctos_cinereus
ENSCHIG00000018805	-	73	70.588	ENSPCIG00000019737	-	100	70.588	Phascolarctos_cinereus
ENSCHIG00000018805	-	96	50.370	ENSPCIG00000000097	-	99	50.370	Phascolarctos_cinereus
ENSCHIG00000018805	-	99	66.901	ENSPPYG00000025835	-	99	66.901	Pongo_abelii
ENSCHIG00000018805	-	99	69.718	ENSPPYG00000025867	MRPS18C	99	69.718	Pongo_abelii
ENSCHIG00000018805	-	99	63.194	ENSPCAG00000004975	MRPS18C	99	63.194	Procavia_capensis
ENSCHIG00000018805	-	99	66.197	ENSPCOG00000017634	MRPS18C	99	66.197	Propithecus_coquereli
ENSCHIG00000018805	-	68	72.917	ENSPVAG00000006439	MRPS18C	98	72.917	Pteropus_vampyrus
ENSCHIG00000018805	-	99	62.585	ENSRNOG00000002178	Mrps18c	99	62.585	Rattus_norvegicus
ENSCHIG00000018805	-	99	67.606	ENSRBIG00000041685	MRPS18C	99	67.606	Rhinopithecus_bieti
ENSCHIG00000018805	-	99	46.043	ENSRBIG00000031637	-	99	46.043	Rhinopithecus_bieti
ENSCHIG00000018805	-	99	64.964	ENSRBIG00000035023	-	98	64.964	Rhinopithecus_bieti
ENSCHIG00000018805	-	99	67.606	ENSRROG00000044334	MRPS18C	99	67.606	Rhinopithecus_roxellana
ENSCHIG00000018805	-	99	45.324	ENSRROG00000030722	-	99	45.324	Rhinopithecus_roxellana
ENSCHIG00000018805	-	99	64.964	ENSRROG00000033834	-	98	64.964	Rhinopithecus_roxellana
ENSCHIG00000018805	-	99	58.451	ENSSBOG00000022205	-	92	58.451	Saimiri_boliviensis_boliviensis
ENSCHIG00000018805	-	95	54.676	ENSSBOG00000032292	-	100	54.676	Saimiri_boliviensis_boliviensis
ENSCHIG00000018805	-	99	66.667	ENSSBOG00000027568	-	99	66.667	Saimiri_boliviensis_boliviensis
ENSCHIG00000018805	-	100	60.000	ENSSBOG00000029234	-	99	60.000	Saimiri_boliviensis_boliviensis
ENSCHIG00000018805	-	92	60.000	ENSSHAG00000007084	MRPS18C	94	60.741	Sarcophilus_harrisii
ENSCHIG00000018805	-	99	70.213	ENSSSCG00000038042	MRPS18C	99	70.423	Sus_scrofa
ENSCHIG00000018805	-	99	66.197	ENSTBEG00000012505	MRPS18C	99	66.197	Tupaia_belangeri
ENSCHIG00000018805	-	99	71.631	ENSTTRG00000004897	MRPS18C	99	71.631	Tursiops_truncatus
ENSCHIG00000018805	-	99	70.213	ENSUAMG00000012878	MRPS18C	99	70.213	Ursus_americanus
ENSCHIG00000018805	-	99	70.213	ENSUMAG00000008829	MRPS18C	99	70.213	Ursus_maritimus
ENSCHIG00000018805	-	99	69.231	ENSVPAG00000011358	MRPS18C	99	69.231	Vicugna_pacos
ENSCHIG00000018805	-	99	64.539	ENSVVUG00000015672	MRPS18C	99	64.539	Vulpes_vulpes