EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000018937 (Gene tree)
Gene ID: 102176575
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 29636 bases
Position: chr3:77480711-77510346
Accession: 102176575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000020201	RTC	PF01137.21	1e-87	1	1
ENSCHIP00000020212	RTC	PF01137.21	1.3e-86	1	1
ENSCHIP00000020201	RTC_insert	PF05189.13	1.5e-24	1	1
ENSCHIP00000020212	RTC_insert	PF05189.13	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000028042	RTCA-202	1113	XM_018045821	ENSCHIP00000020212	370 (aa)	XP_017901310	UPI000D197460
ENSCHIT00000028031	RTCA-201	1101	XM_018045820	ENSCHIP00000020201	366 (aa)	XP_017901309	UPI0005FB0761

Gene Model

Click here to download ENSCHIG00000018937's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000018937's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000018937	RTCA	100	95.355	ENSG00000137996	RTCA	100	97.959	Homo_sapiens
ENSCHIG00000018937	RTCA	99	72.299	ENSAPOG00000001345	rtca	98	72.299	Acanthochromis_polyacanthus
ENSCHIG00000018937	RTCA	73	95.911	ENSAMEG00000008855	RTCA	100	95.911	Ailuropoda_melanoleuca
ENSCHIG00000018937	RTCA	99	72.022	ENSACIG00000019643	rtca	99	72.022	Amphilophus_citrinellus
ENSCHIG00000018937	RTCA	100	71.585	ENSAOCG00000014979	rtca	99	71.585	Amphiprion_ocellaris
ENSCHIG00000018937	RTCA	100	71.585	ENSAPEG00000006945	rtca	99	71.585	Amphiprion_percula
ENSCHIG00000018937	RTCA	100	70.219	ENSATEG00000006315	rtca	100	70.219	Anabas_testudineus
ENSCHIG00000018937	RTCA	96	81.073	ENSAPLG00000015430	RTCA	100	81.073	Anas_platyrhynchos
ENSCHIG00000018937	RTCA	100	94.262	ENSANAG00000025446	RTCA	100	94.262	Aotus_nancymaae
ENSCHIG00000018937	RTCA	100	70.765	ENSACLG00000020770	rtca	99	70.765	Astatotilapia_calliptera
ENSCHIG00000018937	RTCA	100	73.497	ENSAMXG00000043271	rtca	100	73.497	Astyanax_mexicanus
ENSCHIG00000018937	RTCA	100	99.727	ENSBTAG00000006321	RTCA	100	99.727	Bos_taurus
ENSCHIG00000018937	RTCA	100	94.536	ENSCJAG00000003398	RTCA	100	94.536	Callithrix_jacchus
ENSCHIG00000018937	RTCA	100	96.721	ENSCAFG00000020010	RTCA	68	96.721	Canis_familiaris
ENSCHIG00000018937	RTCA	100	96.721	ENSCAFG00020011528	RTCA	57	96.721	Canis_lupus_dingo
ENSCHIG00000018937	RTCA	100	93.716	ENSTSYG00000011305	RTCA	100	93.716	Carlito_syrichta
ENSCHIG00000018937	RTCA	100	94.262	ENSCCAG00000021844	RTCA	100	94.262	Cebus_capucinus
ENSCHIG00000018937	RTCA	100	92.084	ENSCATG00000019364	RTCA	100	94.822	Cercocebus_atys
ENSCHIG00000018937	RTCA	87	94.637	ENSCLAG00000006125	RTCA	100	94.637	Chinchilla_lanigera
ENSCHIG00000018937	RTCA	100	95.628	ENSCSAG00000001509	RTCA	100	95.628	Chlorocebus_sabaeus
ENSCHIG00000018937	RTCA	100	95.355	ENSCHOG00000005211	RTCA	100	95.355	Choloepus_hoffmanni
ENSCHIG00000018937	RTCA	100	84.426	ENSCPBG00000026658	RTCA	100	84.426	Chrysemys_picta_bellii
ENSCHIG00000018937	RTCA	98	55.556	ENSCING00000007875	-	98	55.556	Ciona_intestinalis
ENSCHIG00000018937	RTCA	98	54.722	ENSCSAVG00000007269	-	98	54.722	Ciona_savignyi
ENSCHIG00000018937	RTCA	100	95.355	ENSCANG00000040106	RTCA	100	95.355	Colobus_angolensis_palliatus
ENSCHIG00000018937	RTCA	73	92.937	ENSCGRG00001013163	Rtca	85	92.937	Cricetulus_griseus_chok1gshd
ENSCHIG00000018937	RTCA	99	69.315	ENSCSEG00000000530	rtca	98	69.315	Cynoglossus_semilaevis
ENSCHIG00000018937	RTCA	100	59.836	ENSCVAG00000021809	rtca	100	59.836	Cyprinodon_variegatus
ENSCHIG00000018937	RTCA	100	73.770	ENSDARG00000002215	rtca	100	73.770	Danio_rerio
ENSCHIG00000018937	RTCA	100	94.809	ENSDNOG00000000456	RTCA	100	94.809	Dasypus_novemcinctus
ENSCHIG00000018937	RTCA	100	93.716	ENSDORG00000005448	Rtca	100	93.716	Dipodomys_ordii
ENSCHIG00000018937	RTCA	98	38.268	FBgn0025630	Rtca	98	38.268	Drosophila_melanogaster
ENSCHIG00000018937	RTCA	95	54.520	ENSEBUG00000008556	rtca	97	54.520	Eptatretus_burgeri
ENSCHIG00000018937	RTCA	100	96.721	ENSEASG00005015926	RTCA	100	96.721	Equus_asinus_asinus
ENSCHIG00000018937	RTCA	100	96.721	ENSECAG00000019831	RTCA	100	96.721	Equus_caballus
ENSCHIG00000018937	RTCA	91	83.526	ENSEEUG00000001165	RTCA	100	83.526	Erinaceus_europaeus
ENSCHIG00000018937	RTCA	99	72.576	ENSELUG00000003741	rtca	99	72.576	Esox_lucius
ENSCHIG00000018937	RTCA	100	96.721	ENSFCAG00000024460	RTCA	100	96.721	Felis_catus
ENSCHIG00000018937	RTCA	93	82.353	ENSFALG00000002443	RTCA	91	82.353	Ficedula_albicollis
ENSCHIG00000018937	RTCA	100	95.355	ENSFDAG00000012070	-	100	95.355	Fukomys_damarensis
ENSCHIG00000018937	RTCA	98	73.481	ENSFDAG00000016084	-	100	73.481	Fukomys_damarensis
ENSCHIG00000018937	RTCA	72	62.595	ENSFHEG00000002868	rtca	96	69.027	Fundulus_heteroclitus
ENSCHIG00000018937	RTCA	100	69.672	ENSGMOG00000013264	rtca	100	69.672	Gadus_morhua
ENSCHIG00000018937	RTCA	100	83.880	ENSGALG00000005277	RTCA	100	83.880	Gallus_gallus
ENSCHIG00000018937	RTCA	100	71.858	ENSGAFG00000011853	rtca	99	71.858	Gambusia_affinis
ENSCHIG00000018937	RTCA	100	69.672	ENSGACG00000013497	rtca	100	69.672	Gasterosteus_aculeatus
ENSCHIG00000018937	RTCA	80	85.666	ENSGAGG00000023306	RTCA	100	85.666	Gopherus_agassizii
ENSCHIG00000018937	RTCA	100	94.536	ENSGGOG00000044018	-	100	94.536	Gorilla_gorilla
ENSCHIG00000018937	RTCA	100	95.355	ENSGGOG00000009546	-	100	95.355	Gorilla_gorilla
ENSCHIG00000018937	RTCA	100	70.492	ENSHBUG00000002114	rtca	99	70.492	Haplochromis_burtoni
ENSCHIG00000018937	RTCA	100	94.262	ENSHGLG00000002617	RTCA	100	94.262	Heterocephalus_glaber_female
ENSCHIG00000018937	RTCA	100	94.262	ENSHGLG00100006056	RTCA	100	94.262	Heterocephalus_glaber_male
ENSCHIG00000018937	RTCA	100	64.208	ENSHCOG00000020628	rtca	89	64.208	Hippocampus_comes
ENSCHIG00000018937	RTCA	100	73.770	ENSIPUG00000024803	rtca	100	73.770	Ictalurus_punctatus
ENSCHIG00000018937	RTCA	100	83.106	ENSSTOG00000033099	-	100	83.106	Ictidomys_tridecemlineatus
ENSCHIG00000018937	RTCA	100	87.705	ENSSTOG00000013528	-	100	87.705	Ictidomys_tridecemlineatus
ENSCHIG00000018937	RTCA	100	67.760	ENSJJAG00000016178	Rtca	100	67.760	Jaculus_jaculus
ENSCHIG00000018937	RTCA	99	72.853	ENSKMAG00000006651	rtca	98	72.853	Kryptolebias_marmoratus
ENSCHIG00000018937	RTCA	99	69.529	ENSLBEG00000028971	rtca	99	69.529	Labrus_bergylta
ENSCHIG00000018937	RTCA	88	69.159	ENSLBEG00000002448	-	99	69.159	Labrus_bergylta
ENSCHIG00000018937	RTCA	100	77.596	ENSLACG00000013666	RTCA	100	77.596	Latimeria_chalumnae
ENSCHIG00000018937	RTCA	100	72.951	ENSLOCG00000000093	rtca	99	72.951	Lepisosteus_oculatus
ENSCHIG00000018937	RTCA	100	94.262	ENSLAFG00000001473	RTCA	100	94.262	Loxodonta_africana
ENSCHIG00000018937	RTCA	100	95.628	ENSMFAG00000034132	RTCA	100	95.628	Macaca_fascicularis
ENSCHIG00000018937	RTCA	100	95.082	ENSMMUG00000019105	RTCA	100	95.082	Macaca_mulatta
ENSCHIG00000018937	RTCA	84	95.146	ENSMNEG00000037163	RTCA	100	95.146	Macaca_nemestrina
ENSCHIG00000018937	RTCA	100	78.962	ENSMLEG00000042151	RTCA	100	78.962	Mandrillus_leucophaeus
ENSCHIG00000018937	RTCA	100	72.951	ENSMAMG00000016536	rtca	100	72.951	Mastacembelus_armatus
ENSCHIG00000018937	RTCA	100	70.765	ENSMZEG00005017945	rtca	99	70.765	Maylandia_zebra
ENSCHIG00000018937	RTCA	87	82.759	ENSMGAG00000006892	RTCA	99	82.759	Meleagris_gallopavo
ENSCHIG00000018937	RTCA	100	92.077	ENSMAUG00000008488	Rtca	100	92.077	Mesocricetus_auratus
ENSCHIG00000018937	RTCA	84	95.793	ENSMICG00000008643	RTCA	100	95.793	Microcebus_murinus
ENSCHIG00000018937	RTCA	100	92.896	ENSMOCG00000016660	Rtca	100	92.896	Microtus_ochrogaster
ENSCHIG00000018937	RTCA	84	72.168	ENSMMOG00000007750	rtca	100	72.168	Mola_mola
ENSCHIG00000018937	RTCA	100	90.710	ENSMODG00000003557	RTCA	100	90.710	Monodelphis_domestica
ENSCHIG00000018937	RTCA	100	72.951	ENSMALG00000020844	rtca	100	72.951	Monopterus_albus
ENSCHIG00000018937	RTCA	100	92.350	MGP_CAROLIEiJ_G0025565	Rtca	100	92.350	Mus_caroli
ENSCHIG00000018937	RTCA	100	91.803	ENSMUSG00000000339	Rtca	100	91.803	Mus_musculus
ENSCHIG00000018937	RTCA	100	92.077	MGP_PahariEiJ_G0027011	Rtca	100	92.077	Mus_pahari
ENSCHIG00000018937	RTCA	100	92.077	MGP_SPRETEiJ_G0026515	Rtca	100	92.077	Mus_spretus
ENSCHIG00000018937	RTCA	100	96.448	ENSMPUG00000012119	RTCA	100	96.448	Mustela_putorius_furo
ENSCHIG00000018937	RTCA	100	88.828	ENSMLUG00000009922	RTCA	100	88.828	Myotis_lucifugus
ENSCHIG00000018937	RTCA	100	91.803	ENSNGAG00000011540	Rtca	99	91.803	Nannospalax_galili
ENSCHIG00000018937	RTCA	100	70.765	ENSNBRG00000003062	rtca	99	70.765	Neolamprologus_brichardi
ENSCHIG00000018937	RTCA	100	95.355	ENSNLEG00000031426	RTCA	100	95.355	Nomascus_leucogenys
ENSCHIG00000018937	RTCA	58	95.122	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSCHIG00000018937	RTCA	73	89.219	ENSOPRG00000012092	RTCA	71	89.219	Ochotona_princeps
ENSCHIG00000018937	RTCA	95	94.253	ENSODEG00000006990	RTCA	97	94.318	Octodon_degus
ENSCHIG00000018937	RTCA	100	70.492	ENSONIG00000007753	rtca	99	70.492	Oreochromis_niloticus
ENSCHIG00000018937	RTCA	87	88.328	ENSOANG00000012055	RTCA	98	88.328	Ornithorhynchus_anatinus
ENSCHIG00000018937	RTCA	100	95.902	ENSOCUG00000014247	RTCA	100	95.902	Oryctolagus_cuniculus
ENSCHIG00000018937	RTCA	100	71.038	ENSORLG00000013605	rtca	100	71.038	Oryzias_latipes
ENSCHIG00000018937	RTCA	100	71.038	ENSORLG00020001904	rtca	100	71.038	Oryzias_latipes_hni
ENSCHIG00000018937	RTCA	100	71.038	ENSORLG00015021064	rtca	100	71.038	Oryzias_latipes_hsok
ENSCHIG00000018937	RTCA	100	71.585	ENSOMEG00000000756	rtca	100	71.585	Oryzias_melastigma
ENSCHIG00000018937	RTCA	100	85.246	ENSOGAG00000005627	RTCA	100	85.246	Otolemur_garnettii
ENSCHIG00000018937	RTCA	87	99.371	ENSOARG00000018122	RTCA	100	99.371	Ovis_aries
ENSCHIG00000018937	RTCA	100	91.821	ENSPPAG00000035119	RTCA	100	94.822	Pan_paniscus
ENSCHIG00000018937	RTCA	100	96.448	ENSPPRG00000000350	RTCA	100	96.448	Panthera_pardus
ENSCHIG00000018937	RTCA	100	96.448	ENSPTIG00000012816	RTCA	100	96.448	Panthera_tigris_altaica
ENSCHIG00000018937	RTCA	100	91.821	ENSPTRG00000001004	RTCA	100	94.822	Pan_troglodytes
ENSCHIG00000018937	RTCA	100	95.355	ENSPANG00000000346	RTCA	100	95.355	Papio_anubis
ENSCHIG00000018937	RTCA	100	74.590	ENSPKIG00000001653	rtca	100	74.590	Paramormyrops_kingsleyae
ENSCHIG00000018937	RTCA	100	84.973	ENSPSIG00000011408	RTCA	100	84.973	Pelodiscus_sinensis
ENSCHIG00000018937	RTCA	100	92.623	ENSPEMG00000018582	Rtca	100	92.623	Peromyscus_maniculatus_bairdii
ENSCHIG00000018937	RTCA	100	59.128	ENSPMAG00000009110	rtca	100	59.128	Petromyzon_marinus
ENSCHIG00000018937	RTCA	100	91.530	ENSPCIG00000007684	RTCA	100	91.530	Phascolarctos_cinereus
ENSCHIG00000018937	RTCA	100	72.207	ENSPFOG00000004824	rtca	100	72.207	Poecilia_formosa
ENSCHIG00000018937	RTCA	100	72.404	ENSPLAG00000011753	rtca	99	72.404	Poecilia_latipinna
ENSCHIG00000018937	RTCA	100	72.404	ENSPMEG00000020469	rtca	99	72.404	Poecilia_mexicana
ENSCHIG00000018937	RTCA	100	73.224	ENSPREG00000001365	rtca	99	73.224	Poecilia_reticulata
ENSCHIG00000018937	RTCA	100	95.355	ENSPPYG00000001115	RTCA	100	95.355	Pongo_abelii
ENSCHIG00000018937	RTCA	100	90.984	ENSPCAG00000005076	RTCA	100	90.984	Procavia_capensis
ENSCHIG00000018937	RTCA	100	96.175	ENSPCOG00000005603	RTCA	100	96.175	Propithecus_coquereli
ENSCHIG00000018937	RTCA	100	91.029	ENSPVAG00000009478	RTCA	100	91.029	Pteropus_vampyrus
ENSCHIG00000018937	RTCA	100	70.765	ENSPNYG00000004722	rtca	99	70.765	Pundamilia_nyererei
ENSCHIG00000018937	RTCA	100	73.497	ENSPNAG00000022270	rtca	100	73.497	Pygocentrus_nattereri
ENSCHIG00000018937	RTCA	100	92.896	ENSRNOG00000014575	Rtca	100	92.896	Rattus_norvegicus
ENSCHIG00000018937	RTCA	100	91.557	ENSRBIG00000041180	RTCA	100	94.175	Rhinopithecus_bieti
ENSCHIG00000018937	RTCA	100	94.809	ENSRROG00000024929	RTCA	100	94.809	Rhinopithecus_roxellana
ENSCHIG00000018937	RTCA	100	93.716	ENSSBOG00000028626	RTCA	100	93.716	Saimiri_boliviensis_boliviensis
ENSCHIG00000018937	RTCA	100	91.803	ENSSHAG00000001758	RTCA	100	91.803	Sarcophilus_harrisii
ENSCHIG00000018937	RTCA	98	69.722	ENSSMAG00000014680	rtca	97	69.722	Scophthalmus_maximus
ENSCHIG00000018937	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSCHIG00000018937	RTCA	98	70.300	ENSSLDG00000018985	rtca	99	70.300	Seriola_lalandi_dorsalis
ENSCHIG00000018937	RTCA	87	87.697	ENSSARG00000013993	RTCA	100	87.697	Sorex_araneus
ENSCHIG00000018937	RTCA	100	70.765	ENSSPAG00000011938	rtca	99	70.765	Stegastes_partitus
ENSCHIG00000018937	RTCA	100	97.541	ENSSSCG00000006865	RTCA	100	97.541	Sus_scrofa
ENSCHIG00000018937	RTCA	100	83.607	ENSTGUG00000005154	RTCA	100	83.607	Taeniopygia_guttata
ENSCHIG00000018937	RTCA	100	71.311	ENSTRUG00000008799	rtca	100	71.311	Takifugu_rubripes
ENSCHIG00000018937	RTCA	100	71.858	ENSTNIG00000004725	rtca	100	71.858	Tetraodon_nigroviridis
ENSCHIG00000018937	RTCA	76	67.227	ENSTBEG00000000943	RTCA	82	67.227	Tupaia_belangeri
ENSCHIG00000018937	RTCA	100	93.668	ENSTTRG00000015327	RTCA	100	93.668	Tursiops_truncatus
ENSCHIG00000018937	RTCA	94	93.586	ENSUAMG00000017265	RTCA	96	93.586	Ursus_americanus
ENSCHIG00000018937	RTCA	100	95.902	ENSUMAG00000007881	RTCA	100	95.902	Ursus_maritimus
ENSCHIG00000018937	RTCA	87	86.751	ENSVPAG00000001039	RTCA	84	86.751	Vicugna_pacos
ENSCHIG00000018937	RTCA	100	96.448	ENSVVUG00000022041	RTCA	68	96.448	Vulpes_vulpes
ENSCHIG00000018937	RTCA	99	65.940	ENSXETG00000031661	RTCA	99	65.940	Xenopus_tropicalis
ENSCHIG00000018937	RTCA	100	62.842	ENSXCOG00000008002	rtca	100	62.842	Xiphophorus_couchianus
ENSCHIG00000018937	RTCA	100	72.131	ENSXMAG00000005482	rtca	99	72.131	Xiphophorus_maculatus