EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000019100 (Gene tree)
Gene ID: 102169374
Gene Symbol: CNOT6
Alias: CCR4|Ccr4a|KIAA1194
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 63032 bases
Position: chr7:108071822-108134853
Accession: 102169374
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000020446	Exo_endo_phos	PF03372.23	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000028281	CNOT6-201	1676	XM_018051625	ENSCHIP00000020446	557 (aa)	XP_017907114	UPI0003AFC6AA

Gene Model

Click here to download ENSCHIG00000019100's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019100's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000019100	CNOT6	100	78.636	ENSCHIG00000006297	CNOT6L	99	78.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019100	CNOT6	100	96.948	ENSG00000113300	CNOT6	100	97.368	Homo_sapiens
ENSCHIG00000019100	CNOT6	100	86.762	ENSAPOG00000009994	cnot6b	100	86.762	Acanthochromis_polyacanthus
ENSCHIG00000019100	CNOT6	100	98.390	ENSAMEG00000000949	CNOT6	99	98.390	Ailuropoda_melanoleuca
ENSCHIG00000019100	CNOT6	100	85.689	ENSACIG00000016566	cnot6b	100	85.689	Amphilophus_citrinellus
ENSCHIG00000019100	CNOT6	100	86.762	ENSAOCG00000006893	cnot6b	100	86.762	Amphiprion_ocellaris
ENSCHIG00000019100	CNOT6	100	86.762	ENSAPEG00000016949	cnot6b	100	86.762	Amphiprion_percula
ENSCHIG00000019100	CNOT6	100	84.794	ENSATEG00000007862	cnot6b	100	84.794	Anabas_testudineus
ENSCHIG00000019100	CNOT6	100	95.871	ENSAPLG00000012715	CNOT6	99	95.871	Anas_platyrhynchos
ENSCHIG00000019100	CNOT6	100	93.357	ENSACAG00000016548	CNOT6	100	93.357	Anolis_carolinensis
ENSCHIG00000019100	CNOT6	100	97.307	ENSANAG00000030436	CNOT6	96	97.307	Aotus_nancymaae
ENSCHIG00000019100	CNOT6	100	84.794	ENSACLG00000008279	cnot6b	100	85.689	Astatotilapia_calliptera
ENSCHIG00000019100	CNOT6	100	85.125	ENSAMXG00000034694	cnot6b	100	85.125	Astyanax_mexicanus
ENSCHIG00000019100	CNOT6	100	86.559	ENSAMXG00000019140	cnot6a	100	86.559	Astyanax_mexicanus
ENSCHIG00000019100	CNOT6	100	99.102	ENSBTAG00000017362	CNOT6	100	99.102	Bos_taurus
ENSCHIG00000019100	CNOT6	100	97.127	ENSCJAG00000009795	CNOT6	100	97.127	Callithrix_jacchus
ENSCHIG00000019100	CNOT6	100	98.564	ENSCAFG00000000464	CNOT6	100	98.564	Canis_familiaris
ENSCHIG00000019100	CNOT6	100	98.564	ENSCAFG00020002441	CNOT6	100	98.564	Canis_lupus_dingo
ENSCHIG00000019100	CNOT6	100	96.230	ENSTSYG00000003982	CNOT6	100	96.230	Carlito_syrichta
ENSCHIG00000019100	CNOT6	100	92.101	ENSCPOG00000035657	CNOT6	100	92.101	Cavia_porcellus
ENSCHIG00000019100	CNOT6	100	92.639	ENSCCAG00000033670	CNOT6	100	92.639	Cebus_capucinus
ENSCHIG00000019100	CNOT6	100	96.948	ENSCATG00000042014	CNOT6	100	96.948	Cercocebus_atys
ENSCHIG00000019100	CNOT6	100	95.871	ENSCLAG00000010489	CNOT6	100	95.871	Chinchilla_lanigera
ENSCHIG00000019100	CNOT6	100	96.948	ENSCSAG00000008165	CNOT6	100	96.948	Chlorocebus_sabaeus
ENSCHIG00000019100	CNOT6	100	96.409	ENSCHOG00000009680	CNOT6	100	96.409	Choloepus_hoffmanni
ENSCHIG00000019100	CNOT6	100	95.153	ENSCPBG00000008908	CNOT6	100	95.153	Chrysemys_picta_bellii
ENSCHIG00000019100	CNOT6	100	97.127	ENSCANG00000026756	CNOT6	100	97.127	Colobus_angolensis_palliatus
ENSCHIG00000019100	CNOT6	100	95.332	ENSCGRG00001011452	Cnot6	100	95.332	Cricetulus_griseus_chok1gshd
ENSCHIG00000019100	CNOT6	100	93.716	ENSCGRG00000010407	Cnot6	100	93.716	Cricetulus_griseus_crigri
ENSCHIG00000019100	CNOT6	100	85.868	ENSCSEG00000010939	cnot6b	100	85.868	Cynoglossus_semilaevis
ENSCHIG00000019100	CNOT6	100	85.305	ENSCVAG00000010538	cnot6b	100	85.305	Cyprinodon_variegatus
ENSCHIG00000019100	CNOT6	100	84.229	ENSDARG00000101072	cnot6b	100	84.229	Danio_rerio
ENSCHIG00000019100	CNOT6	100	86.380	ENSDARG00000008255	cnot6a	100	86.380	Danio_rerio
ENSCHIG00000019100	CNOT6	100	97.666	ENSDNOG00000041644	CNOT6	100	97.666	Dasypus_novemcinctus
ENSCHIG00000019100	CNOT6	100	86.535	ENSDORG00000001708	Cnot6	100	86.535	Dipodomys_ordii
ENSCHIG00000019100	CNOT6	100	77.996	ENSETEG00000006975	CNOT6	100	77.996	Echinops_telfairi
ENSCHIG00000019100	CNOT6	100	97.666	ENSEASG00005012794	-	100	97.666	Equus_asinus_asinus
ENSCHIG00000019100	CNOT6	90	92.400	ENSEASG00005012957	-	99	92.400	Equus_asinus_asinus
ENSCHIG00000019100	CNOT6	100	98.384	ENSECAG00000019325	CNOT6	100	98.384	Equus_caballus
ENSCHIG00000019100	CNOT6	100	91.741	ENSECAG00000012704	-	99	91.741	Equus_caballus
ENSCHIG00000019100	CNOT6	100	96.768	ENSEEUG00000015382	CNOT6	100	96.768	Erinaceus_europaeus
ENSCHIG00000019100	CNOT6	100	81.900	ENSELUG00000024580	cnot6a	100	81.900	Esox_lucius
ENSCHIG00000019100	CNOT6	100	83.245	ENSELUG00000015981	cnot6b	99	83.245	Esox_lucius
ENSCHIG00000019100	CNOT6	100	98.564	ENSFCAG00000001881	CNOT6	100	98.564	Felis_catus
ENSCHIG00000019100	CNOT6	100	96.050	ENSFALG00000007699	CNOT6	100	96.050	Ficedula_albicollis
ENSCHIG00000019100	CNOT6	100	95.871	ENSFDAG00000001999	CNOT6	100	95.871	Fukomys_damarensis
ENSCHIG00000019100	CNOT6	68	83.386	ENSFHEG00000013756	cnot6b	94	89.744	Fundulus_heteroclitus
ENSCHIG00000019100	CNOT6	95	85.066	ENSGMOG00000009767	cnot6b	99	85.066	Gadus_morhua
ENSCHIG00000019100	CNOT6	100	96.050	ENSGALG00000034316	CNOT6	100	96.050	Gallus_gallus
ENSCHIG00000019100	CNOT6	100	85.484	ENSGAFG00000008525	cnot6b	100	85.484	Gambusia_affinis
ENSCHIG00000019100	CNOT6	95	82.987	ENSGACG00000018046	cnot6b	99	82.987	Gasterosteus_aculeatus
ENSCHIG00000019100	CNOT6	100	79.354	ENSGAGG00000012176	CNOT6	100	79.354	Gopherus_agassizii
ENSCHIG00000019100	CNOT6	100	96.948	ENSGGOG00000003675	CNOT6	100	96.948	Gorilla_gorilla
ENSCHIG00000019100	CNOT6	100	84.973	ENSHBUG00000002819	cnot6b	100	85.868	Haplochromis_burtoni
ENSCHIG00000019100	CNOT6	100	96.050	ENSHGLG00000017756	CNOT6	100	96.050	Heterocephalus_glaber_female
ENSCHIG00000019100	CNOT6	100	96.050	ENSHGLG00100005747	CNOT6	100	96.050	Heterocephalus_glaber_male
ENSCHIG00000019100	CNOT6	100	83.542	ENSHCOG00000016176	cnot6b	100	84.436	Hippocampus_comes
ENSCHIG00000019100	CNOT6	100	84.409	ENSIPUG00000017482	cnot6b	100	84.409	Ictalurus_punctatus
ENSCHIG00000019100	CNOT6	100	85.484	ENSIPUG00000019831	cnot6a	100	85.484	Ictalurus_punctatus
ENSCHIG00000019100	CNOT6	100	97.307	ENSSTOG00000002803	CNOT6	100	97.307	Ictidomys_tridecemlineatus
ENSCHIG00000019100	CNOT6	100	95.512	ENSJJAG00000012296	Cnot6	100	95.512	Jaculus_jaculus
ENSCHIG00000019100	CNOT6	100	86.559	ENSKMAG00000004640	cnot6b	100	86.559	Kryptolebias_marmoratus
ENSCHIG00000019100	CNOT6	100	83.900	ENSLBEG00000027917	cnot6b	100	84.794	Labrus_bergylta
ENSCHIG00000019100	CNOT6	100	89.785	ENSLOCG00000010102	cnot6b	99	89.785	Lepisosteus_oculatus
ENSCHIG00000019100	CNOT6	100	97.666	ENSLAFG00000016742	CNOT6	100	97.666	Loxodonta_africana
ENSCHIG00000019100	CNOT6	100	96.948	ENSMFAG00000030867	CNOT6	100	96.948	Macaca_fascicularis
ENSCHIG00000019100	CNOT6	100	96.948	ENSMMUG00000018690	CNOT6	100	96.948	Macaca_mulatta
ENSCHIG00000019100	CNOT6	100	96.948	ENSMNEG00000038565	CNOT6	100	96.948	Macaca_nemestrina
ENSCHIG00000019100	CNOT6	100	96.948	ENSMLEG00000010555	CNOT6	100	96.948	Mandrillus_leucophaeus
ENSCHIG00000019100	CNOT6	100	87.120	ENSMAMG00000007515	cnot6b	100	87.120	Mastacembelus_armatus
ENSCHIG00000019100	CNOT6	100	84.794	ENSMZEG00005012899	cnot6b	100	85.689	Maylandia_zebra
ENSCHIG00000019100	CNOT6	100	96.409	ENSMAUG00000019798	Cnot6	100	96.409	Mesocricetus_auratus
ENSCHIG00000019100	CNOT6	100	95.512	ENSMICG00000013018	-	100	95.512	Microcebus_murinus
ENSCHIG00000019100	CNOT6	98	86.949	ENSMICG00000028378	-	99	86.949	Microcebus_murinus
ENSCHIG00000019100	CNOT6	100	96.230	ENSMOCG00000021662	Cnot6	100	96.230	Microtus_ochrogaster
ENSCHIG00000019100	CNOT6	100	83.871	ENSMMOG00000003227	cnot6b	100	83.871	Mola_mola
ENSCHIG00000019100	CNOT6	100	96.230	ENSMODG00000003979	CNOT6	100	96.230	Monodelphis_domestica
ENSCHIG00000019100	CNOT6	100	86.762	ENSMALG00000014251	cnot6b	100	86.762	Monopterus_albus
ENSCHIG00000019100	CNOT6	100	96.409	MGP_CAROLIEiJ_G0016277	Cnot6	100	96.409	Mus_caroli
ENSCHIG00000019100	CNOT6	100	96.409	ENSMUSG00000020362	Cnot6	100	96.409	Mus_musculus
ENSCHIG00000019100	CNOT6	100	96.409	MGP_PahariEiJ_G0017413	Cnot6	100	96.409	Mus_pahari
ENSCHIG00000019100	CNOT6	100	96.230	MGP_SPRETEiJ_G0017122	Cnot6	100	96.230	Mus_spretus
ENSCHIG00000019100	CNOT6	100	98.384	ENSMPUG00000000587	CNOT6	96	98.384	Mustela_putorius_furo
ENSCHIG00000019100	CNOT6	100	95.730	ENSMLUG00000010257	CNOT6	100	95.730	Myotis_lucifugus
ENSCHIG00000019100	CNOT6	100	95.153	ENSNGAG00000008269	Cnot6	100	95.153	Nannospalax_galili
ENSCHIG00000019100	CNOT6	100	84.973	ENSNBRG00000010798	cnot6b	100	85.868	Neolamprologus_brichardi
ENSCHIG00000019100	CNOT6	100	95.871	ENSNLEG00000002322	CNOT6	100	95.871	Nomascus_leucogenys
ENSCHIG00000019100	CNOT6	81	95.794	ENSMEUG00000000025	CNOT6	81	95.794	Notamacropus_eugenii
ENSCHIG00000019100	CNOT6	88	95.943	ENSOPRG00000008244	-	88	95.943	Ochotona_princeps
ENSCHIG00000019100	CNOT6	100	95.332	ENSODEG00000007041	CNOT6	100	95.332	Octodon_degus
ENSCHIG00000019100	CNOT6	75	85.106	ENSONIG00000013027	cnot6b	99	85.106	Oreochromis_niloticus
ENSCHIG00000019100	CNOT6	100	94.794	ENSOANG00000010226	CNOT6	100	94.794	Ornithorhynchus_anatinus
ENSCHIG00000019100	CNOT6	100	96.601	ENSOCUG00000011083	CNOT6	100	96.601	Oryctolagus_cuniculus
ENSCHIG00000019100	CNOT6	100	85.331	ENSORLG00000005059	cnot6b	100	85.331	Oryzias_latipes
ENSCHIG00000019100	CNOT6	100	85.331	ENSORLG00020012784	cnot6b	100	85.331	Oryzias_latipes_hni
ENSCHIG00000019100	CNOT6	94	84.704	ENSORLG00015022658	cnot6b	98	84.704	Oryzias_latipes_hsok
ENSCHIG00000019100	CNOT6	100	85.510	ENSOMEG00000005295	cnot6b	100	85.510	Oryzias_melastigma
ENSCHIG00000019100	CNOT6	94	96.947	ENSOGAG00000032470	CNOT6	100	96.947	Otolemur_garnettii
ENSCHIG00000019100	CNOT6	97	99.446	ENSOARG00000001003	CNOT6	100	99.446	Ovis_aries
ENSCHIG00000019100	CNOT6	100	96.948	ENSPPAG00000032253	CNOT6	100	96.948	Pan_paniscus
ENSCHIG00000019100	CNOT6	100	98.384	ENSPPRG00000011912	CNOT6	100	98.384	Panthera_pardus
ENSCHIG00000019100	CNOT6	100	98.384	ENSPTIG00000016794	CNOT6	100	98.384	Panthera_tigris_altaica
ENSCHIG00000019100	CNOT6	100	96.948	ENSPTRG00000017636	CNOT6	100	96.948	Pan_troglodytes
ENSCHIG00000019100	CNOT6	100	96.948	ENSPANG00000016191	CNOT6	100	96.948	Papio_anubis
ENSCHIG00000019100	CNOT6	100	86.738	ENSPKIG00000021368	cnot6b	100	86.738	Paramormyrops_kingsleyae
ENSCHIG00000019100	CNOT6	98	95.588	ENSPSIG00000017307	CNOT6	100	95.588	Pelodiscus_sinensis
ENSCHIG00000019100	CNOT6	100	85.689	ENSPMGG00000011238	cnot6b	100	85.689	Periophthalmus_magnuspinnatus
ENSCHIG00000019100	CNOT6	100	95.153	ENSPEMG00000000627	Cnot6	100	95.153	Peromyscus_maniculatus_bairdii
ENSCHIG00000019100	CNOT6	100	95.691	ENSPCIG00000020319	CNOT6	99	95.691	Phascolarctos_cinereus
ENSCHIG00000019100	CNOT6	100	85.305	ENSPFOG00000006291	cnot6b	100	85.305	Poecilia_formosa
ENSCHIG00000019100	CNOT6	100	81.720	ENSPLAG00000008266	cnot6b	100	81.720	Poecilia_latipinna
ENSCHIG00000019100	CNOT6	100	85.484	ENSPMEG00000009091	cnot6b	100	85.484	Poecilia_mexicana
ENSCHIG00000019100	CNOT6	100	84.229	ENSPREG00000003713	cnot6b	100	84.229	Poecilia_reticulata
ENSCHIG00000019100	CNOT6	100	96.948	ENSPPYG00000016137	CNOT6	100	96.948	Pongo_abelii
ENSCHIG00000019100	CNOT6	71	95.865	ENSPCAG00000005599	-	71	95.865	Procavia_capensis
ENSCHIG00000019100	CNOT6	100	91.382	ENSPCOG00000017359	CNOT6	100	92.101	Propithecus_coquereli
ENSCHIG00000019100	CNOT6	100	92.819	ENSPVAG00000003069	CNOT6	100	92.819	Pteropus_vampyrus
ENSCHIG00000019100	CNOT6	100	84.615	ENSPNYG00000000321	cnot6b	100	85.510	Pundamilia_nyererei
ENSCHIG00000019100	CNOT6	100	86.738	ENSPNAG00000029586	cnot6a	100	86.738	Pygocentrus_nattereri
ENSCHIG00000019100	CNOT6	100	85.125	ENSPNAG00000028816	cnot6b	100	85.125	Pygocentrus_nattereri
ENSCHIG00000019100	CNOT6	100	95.332	ENSRNOG00000054891	Cnot6	100	95.332	Rattus_norvegicus
ENSCHIG00000019100	CNOT6	100	96.768	ENSRBIG00000004309	CNOT6	100	96.768	Rhinopithecus_bieti
ENSCHIG00000019100	CNOT6	100	96.768	ENSRROG00000035378	CNOT6	100	96.970	Rhinopithecus_roxellana
ENSCHIG00000019100	CNOT6	100	97.127	ENSSBOG00000030494	CNOT6	100	97.127	Saimiri_boliviensis_boliviensis
ENSCHIG00000019100	CNOT6	100	96.050	ENSSHAG00000017436	CNOT6	100	96.050	Sarcophilus_harrisii
ENSCHIG00000019100	CNOT6	100	87.993	ENSSFOG00015015133	CNOT6	100	87.993	Scleropages_formosus
ENSCHIG00000019100	CNOT6	100	86.022	ENSSFOG00015022383	cnot6a	96	86.022	Scleropages_formosus
ENSCHIG00000019100	CNOT6	100	84.615	ENSSMAG00000003084	cnot6b	100	84.615	Scophthalmus_maximus
ENSCHIG00000019100	CNOT6	100	86.583	ENSSDUG00000004151	cnot6b	100	86.583	Seriola_dumerili
ENSCHIG00000019100	CNOT6	100	85.868	ENSSLDG00000004448	cnot6b	100	86.762	Seriola_lalandi_dorsalis
ENSCHIG00000019100	CNOT6	64	77.654	ENSSARG00000012650	-	100	77.654	Sorex_araneus
ENSCHIG00000019100	CNOT6	100	94.794	ENSSPUG00000007893	CNOT6	100	94.794	Sphenodon_punctatus
ENSCHIG00000019100	CNOT6	100	86.583	ENSSPAG00000000149	cnot6b	100	86.583	Stegastes_partitus
ENSCHIG00000019100	CNOT6	100	98.564	ENSSSCG00000014009	CNOT6	100	98.701	Sus_scrofa
ENSCHIG00000019100	CNOT6	100	95.691	ENSTGUG00000001119	CNOT6	100	95.691	Taeniopygia_guttata
ENSCHIG00000019100	CNOT6	100	84.381	ENSTRUG00000002818	cnot6b	100	84.381	Takifugu_rubripes
ENSCHIG00000019100	CNOT6	100	84.740	ENSTNIG00000004443	cnot6b	99	84.740	Tetraodon_nigroviridis
ENSCHIG00000019100	CNOT6	87	67.146	ENSTBEG00000017094	-	100	67.146	Tupaia_belangeri
ENSCHIG00000019100	CNOT6	100	98.923	ENSTTRG00000009363	CNOT6	100	98.923	Tursiops_truncatus
ENSCHIG00000019100	CNOT6	77	98.834	ENSUAMG00000004579	CNOT6	88	98.834	Ursus_americanus
ENSCHIG00000019100	CNOT6	100	94.007	ENSUMAG00000024577	CNOT6	100	94.007	Ursus_maritimus
ENSCHIG00000019100	CNOT6	83	96.963	ENSVPAG00000003593	CNOT6	83	96.963	Vicugna_pacos
ENSCHIG00000019100	CNOT6	100	98.564	ENSVVUG00000026940	CNOT6	100	98.564	Vulpes_vulpes
ENSCHIG00000019100	CNOT6	100	82.079	ENSXCOG00000003360	cnot6b	100	82.079	Xiphophorus_couchianus
ENSCHIG00000019100	CNOT6	100	85.484	ENSXMAG00000008730	cnot6b	100	85.484	Xiphophorus_maculatus