EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCHIG00000019398 (Gene tree)
Gene ID
102168232
Gene Symbol
-
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Capra_hircus
Status
putative
Strand
Minus strand
Length
13404 bases
Position
chr3:14299427-14312830
Accession
102168232
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCHIP00000020905PABPPF00658.182.1e-3111
ENSCHIP00000020905RRM_5PF13893.64.3e-0912
ENSCHIP00000020905RRM_5PF13893.64.3e-0922
ENSCHIP00000020905RRM_1PF00076.225.1e-9214
ENSCHIP00000020905RRM_1PF00076.225.1e-9224
ENSCHIP00000020905RRM_1PF00076.225.1e-9234
ENSCHIP00000020905RRM_1PF00076.225.1e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCHIT00000028745-2448XM_018042151ENSCHIP00000020905660 (aa)XP_017897640UPI00029D5365
Gene Model
Click here to download ENSCHIG00000019398's gene model file
Pathways
Pathway IDPathway NameSource
chx03013RNA transportKEGG
chx03015mRNA surveillance pathwayKEGG
chx03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019398's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCHIG00000019398-10077.121ENSCHIG00000023385-10077.121
ENSCHIG00000019398-5430.072ENSCHIG00000021052-5530.072
ENSCHIG00000019398-5677.041ENSCHIG00000006283-9877.041
ENSCHIG00000019398-5231.646ENSCHIG00000002602HNRNPA05032.450
ENSCHIG00000019398-5530.769ENSCHIG00000020810TIAL17830.220
ENSCHIG00000019398-5666.854ENSCHIG00000019004PABPC59566.667
ENSCHIG00000019398-5533.553ENSCHIG00000014334ELAVL19533.553
ENSCHIG00000019398-5436.905ENSCHIG00000020214TIA19936.905
ENSCHIG00000019398-5537.681ENSCHIG00000015379CELF26037.500
ENSCHIG00000019398-9975.075ENSCHIG00000023714PABPC19794.444
ENSCHIG00000019398-5874.324ENSCHIG00000007231PABPC4L9974.324
ENSCHIG00000019398-9764.734ENSCHIG00000025759PABPC1L9164.734
ENSCHIG00000019398-5830.625ENSCHIG00000002038ELAVL49330.818
ENSCHIG00000019398-5677.041ENSCHIG00000011138-9877.041
ENSCHIG00000019398-5631.579ENSCHIG00000025894ELAVL28934.940
ENSCHIG00000019398-5030.556ENSCHIG00000008431-6730.556
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCHIG00000019398-10098.939ENSG00000090621PABPC4100100.000Homo_sapiens
ENSCHIG00000019398-9979.242ENSAPOG00000001161pabpc410079.671Acanthochromis_polyacanthus
ENSCHIG00000019398-9854.685ENSAMEG00000015083-9954.378Ailuropoda_melanoleuca
ENSCHIG00000019398-10099.091ENSAMEG00000011535-10099.091Ailuropoda_melanoleuca
ENSCHIG00000019398-10079.970ENSACIG00000023343pabpc410080.568Amphilophus_citrinellus
ENSCHIG00000019398-9979.697ENSAOCG00000021529pabpc49190.583Amphiprion_ocellaris
ENSCHIG00000019398-9979.697ENSAPEG00000019196pabpc410079.970Amphiprion_percula
ENSCHIG00000019398-9978.399ENSATEG00000007402pabpc410079.104Anabas_testudineus
ENSCHIG00000019398-9987.557ENSAPLG00000009729-10087.557Anas_platyrhynchos
ENSCHIG00000019398-9985.884ENSACAG00000002544PABPC410085.884Anolis_carolinensis
ENSCHIG00000019398-10099.091ENSANAG00000025079PABPC410099.091Aotus_nancymaae
ENSCHIG00000019398-10079.372ENSACLG00000019558pabpc410079.970Astatotilapia_calliptera
ENSCHIG00000019398-9975.909ENSAMXG00000018779pabpc49976.515Astyanax_mexicanus
ENSCHIG00000019398-5586.826ENSBTAG00000048536-9886.826Bos_taurus
ENSCHIG00000019398-10097.126ENSBTAG00000017125PABPC410097.126Bos_taurus
ENSCHIG00000019398-7882.784ENSCJAG00000045953-9282.721Callithrix_jacchus
ENSCHIG00000019398-10098.636ENSCJAG00000002512-10098.636Callithrix_jacchus
ENSCHIG00000019398-9999.161ENSCAFG00000003081PABPC410095.000Canis_familiaris
ENSCHIG00000019398-10099.242ENSCAFG00020004161PABPC410099.242Canis_lupus_dingo
ENSCHIG00000019398-10098.939ENSTSYG00000006532PABPC410098.939Carlito_syrichta
ENSCHIG00000019398-9998.936ENSCAPG00000015984PABPC410098.936Cavia_aperea
ENSCHIG00000019398-10099.091ENSCPOG00000009552PABPC410099.091Cavia_porcellus
ENSCHIG00000019398-10098.788ENSCCAG00000037306PABPC410098.788Cebus_capucinus
ENSCHIG00000019398-10099.091ENSCATG00000042164PABPC410099.091Cercocebus_atys
ENSCHIG00000019398-10098.636ENSCLAG00000011899PABPC410098.636Chinchilla_lanigera
ENSCHIG00000019398-10099.091ENSCSAG00000001135PABPC410099.091Chlorocebus_sabaeus
ENSCHIG00000019398-8297.098ENSCHOG00000005327PABPC48197.098Choloepus_hoffmanni
ENSCHIG00000019398-9987.860ENSCPBG00000001038PABPC410087.860Chrysemys_picta_bellii
ENSCHIG00000019398-9998.925ENSCANG00000034177PABPC410098.925Colobus_angolensis_palliatus
ENSCHIG00000019398-10097.289ENSCGRG00001018166Pabpc410097.289Cricetulus_griseus_chok1gshd
ENSCHIG00000019398-9994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSCHIG00000019398-10078.924ENSCSEG00000000130pabpc410079.372Cynoglossus_semilaevis
ENSCHIG00000019398-9979.787ENSCVAG00000019246pabpc410080.699Cyprinodon_variegatus
ENSCHIG00000019398-9981.487ENSDARG00000059259pabpc410081.319Danio_rerio
ENSCHIG00000019398-9899.310ENSDNOG00000018444-9999.310Dasypus_novemcinctus
ENSCHIG00000019398-10096.818ENSDORG00000011581Pabpc410096.818Dipodomys_ordii
ENSCHIG00000019398-8662.039ENSETEG00000009172-9962.087Echinops_telfairi
ENSCHIG00000019398-100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSCHIG00000019398-9773.148ENSEBUG00000013782pabpc49972.440Eptatretus_burgeri
ENSCHIG00000019398-9973.222ENSEBUG00000000992pabpc49980.130Eptatretus_burgeri
ENSCHIG00000019398-10099.394ENSEASG00005014119PABPC410099.394Equus_asinus_asinus
ENSCHIG00000019398-10099.394ENSECAG00000009396PABPC410099.394Equus_caballus
ENSCHIG00000019398-10095.909ENSEEUG00000002962PABPC410095.909Erinaceus_europaeus
ENSCHIG00000019398-9980.213ENSELUG00000003195pabpc49980.816Esox_lucius
ENSCHIG00000019398-10099.394ENSFCAG00000015254-10099.394Felis_catus
ENSCHIG00000019398-9987.102ENSFALG00000000543PABPC410087.102Ficedula_albicollis
ENSCHIG00000019398-10098.939ENSFDAG00000020016-10098.939Fukomys_damarensis
ENSCHIG00000019398-9066.872ENSFDAG00000010581-10062.857Fukomys_damarensis
ENSCHIG00000019398-10079.641ENSFHEG00000007548pabpc49390.807Fundulus_heteroclitus
ENSCHIG00000019398-9979.066ENSGMOG00000019025pabpc49979.789Gadus_morhua
ENSCHIG00000019398-9987.860ENSGALG00000003800PABPC410087.860Gallus_gallus
ENSCHIG00000019398-10079.730ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSCHIG00000019398-10077.877ENSGACG00000007179pabpc410078.625Gasterosteus_aculeatus
ENSCHIG00000019398-9987.709ENSGAGG00000001888PABPC410087.709Gopherus_agassizii
ENSCHIG00000019398-10098.939ENSGGOG00000004002PABPC410098.939Gorilla_gorilla
ENSCHIG00000019398-10079.522ENSHBUG00000020206pabpc410080.120Haplochromis_burtoni
ENSCHIG00000019398-10099.091ENSHGLG00000011162PABPC410099.091Heterocephalus_glaber_female
ENSCHIG00000019398-10096.818ENSHGLG00100001580PABPC410096.818Heterocephalus_glaber_male
ENSCHIG00000019398-10079.042ENSHCOG00000012694pabpc410079.192Hippocampus_comes
ENSCHIG00000019398-9879.755ENSIPUG00000016620pabpc49980.330Ictalurus_punctatus
ENSCHIG00000019398-10096.667ENSSTOG00000010416PABPC410096.667Ictidomys_tridecemlineatus
ENSCHIG00000019398-10094.697ENSJJAG00000007781Pabpc410094.697Jaculus_jaculus
ENSCHIG00000019398-9979.248ENSKMAG00000013597pabpc49979.518Kryptolebias_marmoratus
ENSCHIG00000019398-10078.720ENSLBEG00000013654pabpc410079.136Labrus_bergylta
ENSCHIG00000019398-9984.314ENSLACG00000011907PABPC410084.314Latimeria_chalumnae
ENSCHIG00000019398-9982.078ENSLOCG00000001877pabpc49981.928Lepisosteus_oculatus
ENSCHIG00000019398-10099.242ENSLAFG00000000151PABPC410099.242Loxodonta_africana
ENSCHIG00000019398-10099.091ENSMFAG00000041481PABPC410099.091Macaca_fascicularis
ENSCHIG00000019398-10099.091ENSMMUG00000007497PABPC410099.091Macaca_mulatta
ENSCHIG00000019398-10098.939ENSMNEG00000043054PABPC410098.939Macaca_nemestrina
ENSCHIG00000019398-10099.091ENSMLEG00000040716PABPC410099.091Mandrillus_leucophaeus
ENSCHIG00000019398-9979.394ENSMAMG00000010025pabpc49979.248Mastacembelus_armatus
ENSCHIG00000019398-10079.223ENSMZEG00005006141pabpc49290.583Maylandia_zebra
ENSCHIG00000019398-9987.248ENSMGAG00000005408PABPC410087.248Meleagris_gallopavo
ENSCHIG00000019398-7495.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSCHIG00000019398-6988.462ENSMAUG00000001295-9788.462Mesocricetus_auratus
ENSCHIG00000019398-5581.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCHIG00000019398-8994.924ENSMICG00000016633-10094.924Microcebus_murinus
ENSCHIG00000019398-9973.311ENSMICG00000036729-10075.676Microcebus_murinus
ENSCHIG00000019398-10097.741ENSMOCG00000006763Pabpc410097.741Microtus_ochrogaster
ENSCHIG00000019398-10074.667ENSMMOG00000002363pabpc49977.225Mola_mola
ENSCHIG00000019398-5674.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSCHIG00000019398-9889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSCHIG00000019398-9979.003ENSMALG00000011017pabpc410079.136Monopterus_albus
ENSCHIG00000019398-10097.727MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCHIG00000019398-9984.068MGP_CAROLIEiJ_G0024864-10084.068Mus_caroli
ENSCHIG00000019398-10098.182ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSCHIG00000019398-9997.849MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCHIG00000019398-9978.900MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCHIG00000019398-9550.869ENSMPUG00000006836-10050.711Mustela_putorius_furo
ENSCHIG00000019398-10099.394ENSMPUG00000014414-10099.394Mustela_putorius_furo
ENSCHIG00000019398-10092.273ENSMLUG00000012068PABPC410092.273Myotis_lucifugus
ENSCHIG00000019398-10096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSCHIG00000019398-6486.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSCHIG00000019398-5792.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSCHIG00000019398-10096.818ENSNLEG00000011928PABPC410096.818Nomascus_leucogenys
ENSCHIG00000019398-8298.316ENSOPRG00000011984PABPC48798.316Ochotona_princeps
ENSCHIG00000019398-10098.333ENSODEG00000006592-10098.333Octodon_degus
ENSCHIG00000019398-5085.714ENSODEG00000013457-10085.714Octodon_degus
ENSCHIG00000019398-9989.117ENSODEG00000017434-10089.002Octodon_degus
ENSCHIG00000019398-10079.522ENSONIG00000008176pabpc410079.821Oreochromis_niloticus
ENSCHIG00000019398-9987.405ENSOANG00000010001PABPC410087.405Ornithorhynchus_anatinus
ENSCHIG00000019398-9698.892ENSOCUG00000000562PABPC48898.892Oryctolagus_cuniculus
ENSCHIG00000019398-9991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSCHIG00000019398-9991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSCHIG00000019398-9991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSCHIG00000019398-9979.697ENSOMEG00000014410pabpc49983.266Oryzias_melastigma
ENSCHIG00000019398-10096.531ENSOGAG00000004067PABPC410096.531Otolemur_garnettii
ENSCHIG00000019398-100100.000ENSOARG00000020060PABPC4100100.000Ovis_aries
ENSCHIG00000019398-10098.939ENSPPAG00000043625PABPC410098.939Pan_paniscus
ENSCHIG00000019398-10099.394ENSPPRG00000024727PABPC410099.394Panthera_pardus
ENSCHIG00000019398-10099.394ENSPTIG00000005829PABPC410099.394Panthera_tigris_altaica
ENSCHIG00000019398-10098.939ENSPTRG00000000573PABPC410098.939Pan_troglodytes
ENSCHIG00000019398-10099.242ENSPANG00000009484PABPC410099.242Papio_anubis
ENSCHIG00000019398-9981.089ENSPKIG00000025356pabpc49981.694Paramormyrops_kingsleyae
ENSCHIG00000019398-9987.860ENSPSIG00000016892PABPC410087.860Pelodiscus_sinensis
ENSCHIG00000019398-10076.621ENSPMGG00000009073pabpc49977.039Periophthalmus_magnuspinnatus
ENSCHIG00000019398-10090.909ENSPEMG00000024193-9990.909Peromyscus_maniculatus_bairdii
ENSCHIG00000019398-10097.273ENSPEMG00000023569-9997.273Peromyscus_maniculatus_bairdii
ENSCHIG00000019398-9667.311ENSPMAG00000007885pabpc410066.479Petromyzon_marinus
ENSCHIG00000019398-8970.297ENSPMAG00000002836pabpc410070.627Petromyzon_marinus
ENSCHIG00000019398-9893.795ENSPCIG00000020674PABPC410093.571Phascolarctos_cinereus
ENSCHIG00000019398-10079.042ENSPFOG00000002682pabpc410079.790Poecilia_formosa
ENSCHIG00000019398-10078.892ENSPLAG00000010112pabpc410080.240Poecilia_latipinna
ENSCHIG00000019398-9979.483ENSPMEG00000019739pabpc410079.940Poecilia_mexicana
ENSCHIG00000019398-10083.220ENSPREG00000001589pabpc410080.240Poecilia_reticulata
ENSCHIG00000019398-10098.939ENSPPYG00000001506PABPC410098.939Pongo_abelii
ENSCHIG00000019398-10094.545ENSPCAG00000003341PABPC410094.545Procavia_capensis
ENSCHIG00000019398-10099.092ENSPCOG00000023725-10099.092Propithecus_coquereli
ENSCHIG00000019398-9981.494ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSCHIG00000019398-9998.992ENSPVAG00000002187PABPC410098.992Pteropus_vampyrus
ENSCHIG00000019398-10079.372ENSPNYG00000006134pabpc410079.970Pundamilia_nyererei
ENSCHIG00000019398-10079.790ENSPNAG00000024355pabpc410079.940Pygocentrus_nattereri
ENSCHIG00000019398-10095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSCHIG00000019398-10093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSCHIG00000019398-10099.091ENSRBIG00000039761PABPC410099.091Rhinopithecus_bieti
ENSCHIG00000019398-10099.091ENSRROG00000033355PABPC410099.091Rhinopithecus_roxellana
ENSCHIG00000019398-10098.939ENSSBOG00000026193PABPC410098.939Saimiri_boliviensis_boliviensis
ENSCHIG00000019398-9888.253ENSSHAG00000018139PABPC410087.860Sarcophilus_harrisii
ENSCHIG00000019398-9981.975ENSSFOG00015023514pabpc49981.875Scleropages_formosus
ENSCHIG00000019398-9978.971ENSSMAG00000009007pabpc49979.123Scophthalmus_maximus
ENSCHIG00000019398-9979.091ENSSDUG00000012683pabpc49389.412Seriola_dumerili
ENSCHIG00000019398-9979.091ENSSLDG00000013025pabpc49785.217Seriola_lalandi_dorsalis
ENSCHIG00000019398-10091.667ENSSARG00000000310PABPC410091.667Sorex_araneus
ENSCHIG00000019398-9987.405ENSSPUG00000003204PABPC410087.253Sphenodon_punctatus
ENSCHIG00000019398-9979.728ENSSPAG00000009252pabpc49978.987Stegastes_partitus
ENSCHIG00000019398-10099.545ENSSSCG00000003660-10099.545Sus_scrofa
ENSCHIG00000019398-8950.168ENSSSCG00000036170-9650.168Sus_scrofa
ENSCHIG00000019398-9987.746ENSTGUG00000001266PABPC410087.746Taeniopygia_guttata
ENSCHIG00000019398-10078.593ENSTRUG00000005907pabpc49979.129Takifugu_rubripes
ENSCHIG00000019398-10075.716ENSTNIG00000016902pabpc49975.716Tetraodon_nigroviridis
ENSCHIG00000019398-9987.899ENSTBEG00000009035PABPC410087.899Tupaia_belangeri
ENSCHIG00000019398-9983.525ENSTTRG00000014340PABPC410087.227Tursiops_truncatus
ENSCHIG00000019398-10099.091ENSUAMG00000000303PABPC410099.091Ursus_americanus
ENSCHIG00000019398-10099.091ENSUMAG00000019585PABPC410099.091Ursus_maritimus
ENSCHIG00000019398-8498.582ENSVPAG00000010041PABPC47798.582Vicugna_pacos
ENSCHIG00000019398-10099.242ENSVVUG00000005215PABPC410099.242Vulpes_vulpes
ENSCHIG00000019398-9979.666ENSXETG00000010946pabpc410079.666Xenopus_tropicalis
ENSCHIG00000019398-5697.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSCHIG00000019398-9977.907ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSCHIG00000019398-10079.192ENSXMAG00000019007pabpc410080.090Xiphophorus_maculatus

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