EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000019425 (Gene tree)
Gene ID: 102187101
Gene Symbol: -
Alias: -
Full Name: STN1%2C CST complex subunit
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 35512 bases
Position: chr26:27279703-27315214
Accession: 102187101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000020950	tRNA_anti-codon	PF01336.25	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000028790	-	1113	XM_018041596	ENSCHIP00000020950	370 (aa)	XP_017897085	UPI00084789CA

Gene Model

Click here to download ENSCHIG00000019425's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019425's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000019425	-	100	83.784	ENSCHIG00000003253	-	98	86.216

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019425	-	100	82.480	ENSG00000107960	STN1	100	81.892	Homo_sapiens
ENSCHIG00000019425	-	100	77.358	ENSAMEG00000017971	STN1	98	77.358	Ailuropoda_melanoleuca
ENSCHIG00000019425	-	100	55.526	ENSAPLG00000006661	STN1	100	54.865	Anas_platyrhynchos
ENSCHIG00000019425	-	100	46.486	ENSACAG00000004954	STN1	100	46.486	Anolis_carolinensis
ENSCHIG00000019425	-	100	82.162	ENSANAG00000038147	STN1	100	81.892	Aotus_nancymaae
ENSCHIG00000019425	-	100	97.838	ENSBTAG00000015019	STN1	100	97.838	Bos_taurus
ENSCHIG00000019425	-	100	82.480	ENSCJAG00000040388	STN1	100	81.351	Callithrix_jacchus
ENSCHIG00000019425	-	100	78.877	ENSCAFG00000010483	STN1	100	78.495	Canis_familiaris
ENSCHIG00000019425	-	100	78.763	ENSCAFG00020010650	STN1	100	78.495	Canis_lupus_dingo
ENSCHIG00000019425	-	88	73.846	ENSCAPG00000016278	STN1	100	73.846	Cavia_aperea
ENSCHIG00000019425	-	100	74.595	ENSCPOG00000006273	STN1	98	73.784	Cavia_porcellus
ENSCHIG00000019425	-	100	81.892	ENSCCAG00000020507	STN1	100	81.892	Cebus_capucinus
ENSCHIG00000019425	-	100	80.863	ENSCATG00000043103	STN1	100	80.541	Cercocebus_atys
ENSCHIG00000019425	-	100	77.027	ENSCLAG00000001617	STN1	98	76.216	Chinchilla_lanigera
ENSCHIG00000019425	-	100	80.863	ENSCSAG00000005318	STN1	100	80.270	Chlorocebus_sabaeus
ENSCHIG00000019425	-	100	59.459	ENSCPBG00000024481	STN1	100	59.459	Chrysemys_picta_bellii
ENSCHIG00000019425	-	100	81.402	ENSCANG00000029004	STN1	100	80.811	Colobus_angolensis_palliatus
ENSCHIG00000019425	-	100	61.995	ENSCGRG00001023175	Stn1	98	61.725	Cricetulus_griseus_chok1gshd
ENSCHIG00000019425	-	100	70.620	ENSCGRG00000004324	Stn1	98	70.081	Cricetulus_griseus_crigri
ENSCHIG00000019425	-	97	44.142	ENSDARG00000007734	stn1	96	44.142	Danio_rerio
ENSCHIG00000019425	-	86	78.997	ENSDNOG00000011022	STN1	99	77.743	Dasypus_novemcinctus
ENSCHIG00000019425	-	96	77.247	ENSDORG00000005994	Stn1	100	76.757	Dipodomys_ordii
ENSCHIG00000019425	-	100	67.655	ENSETEG00000013967	STN1	99	67.027	Echinops_telfairi
ENSCHIG00000019425	-	100	85.984	ENSEASG00005015134	STN1	100	85.984	Equus_asinus_asinus
ENSCHIG00000019425	-	100	85.445	ENSECAG00000023477	STN1	100	85.445	Equus_caballus
ENSCHIG00000019425	-	96	80.056	ENSFCAG00000030378	STN1	100	79.459	Felis_catus
ENSCHIG00000019425	-	100	55.376	ENSFALG00000008791	STN1	100	54.595	Ficedula_albicollis
ENSCHIG00000019425	-	100	74.595	ENSFDAG00000007528	STN1	98	73.784	Fukomys_damarensis
ENSCHIG00000019425	-	100	55.795	ENSGALG00000008304	STN1	100	55.795	Gallus_gallus
ENSCHIG00000019425	-	79	57.483	ENSGAGG00000003673	STN1	89	57.483	Gopherus_agassizii
ENSCHIG00000019425	-	100	82.749	ENSGGOG00000008979	STN1	100	82.162	Gorilla_gorilla
ENSCHIG00000019425	-	100	77.027	ENSHGLG00000002775	OBFC1	98	76.216	Heterocephalus_glaber_female
ENSCHIG00000019425	-	100	77.027	ENSHGLG00100012701	STN1	98	76.216	Heterocephalus_glaber_male
ENSCHIG00000019425	-	98	39.566	ENSHCOG00000002048	stn1	98	39.566	Hippocampus_comes
ENSCHIG00000019425	-	100	76.216	ENSSTOG00000011905	STN1	98	75.946	Ictidomys_tridecemlineatus
ENSCHIG00000019425	-	99	69.003	ENSJJAG00000020389	Stn1	99	67.838	Jaculus_jaculus
ENSCHIG00000019425	-	100	45.213	ENSLACG00000012381	STN1	100	44.947	Latimeria_chalumnae
ENSCHIG00000019425	-	97	80.716	ENSLAFG00000004232	STN1	98	80.000	Loxodonta_africana
ENSCHIG00000019425	-	100	80.863	ENSMFAG00000041817	STN1	100	80.270	Macaca_fascicularis
ENSCHIG00000019425	-	100	80.863	ENSMMUG00000015323	STN1	100	80.270	Macaca_mulatta
ENSCHIG00000019425	-	100	80.863	ENSMNEG00000031906	STN1	100	80.270	Macaca_nemestrina
ENSCHIG00000019425	-	100	80.593	ENSMLEG00000040619	STN1	100	80.270	Mandrillus_leucophaeus
ENSCHIG00000019425	-	100	55.200	ENSMGAG00000010550	STN1	98	54.400	Meleagris_gallopavo
ENSCHIG00000019425	-	100	71.159	ENSMAUG00000015671	Stn1	98	70.620	Mesocricetus_auratus
ENSCHIG00000019425	-	100	79.189	ENSMICG00000012547	STN1	100	79.189	Microcebus_murinus
ENSCHIG00000019425	-	100	63.224	ENSMOCG00000009637	Stn1	98	62.720	Microtus_ochrogaster
ENSCHIG00000019425	-	100	67.925	ENSMODG00000011003	STN1	100	67.925	Monodelphis_domestica
ENSCHIG00000019425	-	100	68.464	MGP_CAROLIEiJ_G0023057	Stn1	98	67.925	Mus_caroli
ENSCHIG00000019425	-	100	66.846	ENSMUSG00000042694	Stn1	98	66.307	Mus_musculus
ENSCHIG00000019425	-	100	67.116	MGP_PahariEiJ_G0014547	Stn1	98	66.577	Mus_pahari
ENSCHIG00000019425	-	100	66.577	MGP_SPRETEiJ_G0023978	Stn1	98	66.038	Mus_spretus
ENSCHIG00000019425	-	100	72.507	ENSMPUG00000016800	STN1	100	72.507	Mustela_putorius_furo
ENSCHIG00000019425	-	100	81.600	ENSMLUG00000002037	STN1	98	80.267	Myotis_lucifugus
ENSCHIG00000019425	-	100	75.472	ENSNGAG00000023986	Stn1	98	75.472	Nannospalax_galili
ENSCHIG00000019425	-	100	82.210	ENSNLEG00000015282	STN1	100	81.622	Nomascus_leucogenys
ENSCHIG00000019425	-	100	71.622	ENSOPRG00000010707	STN1	100	71.351	Ochotona_princeps
ENSCHIG00000019425	-	100	69.730	ENSODEG00000007270	STN1	98	69.189	Octodon_degus
ENSCHIG00000019425	-	98	64.641	ENSOANG00000001628	STN1	98	64.641	Ornithorhynchus_anatinus
ENSCHIG00000019425	-	100	78.706	ENSOCUG00000003028	STN1	98	78.706	Oryctolagus_cuniculus
ENSCHIG00000019425	-	98	41.033	ENSORLG00000002353	stn1	99	41.033	Oryzias_latipes
ENSCHIG00000019425	-	98	41.848	ENSORLG00020012935	stn1	98	41.848	Oryzias_latipes_hni
ENSCHIG00000019425	-	98	41.576	ENSORLG00015012154	stn1	98	41.576	Oryzias_latipes_hsok
ENSCHIG00000019425	-	100	76.944	ENSOGAG00000008722	STN1	98	76.944	Otolemur_garnettii
ENSCHIG00000019425	-	100	97.594	ENSOARG00000004883	STN1	98	97.594	Ovis_aries
ENSCHIG00000019425	-	100	82.749	ENSPPAG00000030947	STN1	100	82.162	Pan_paniscus
ENSCHIG00000019425	-	96	80.618	ENSPPRG00000010476	STN1	100	80.000	Panthera_pardus
ENSCHIG00000019425	-	96	79.387	ENSPTIG00000017333	STN1	100	78.552	Panthera_tigris_altaica
ENSCHIG00000019425	-	100	82.749	ENSPTRG00000002919	STN1	100	82.162	Pan_troglodytes
ENSCHIG00000019425	-	100	80.863	ENSPANG00000020926	STN1	100	80.270	Papio_anubis
ENSCHIG00000019425	-	99	38.120	ENSPKIG00000000721	stn1	98	39.687	Paramormyrops_kingsleyae
ENSCHIG00000019425	-	100	56.604	ENSPSIG00000010802	STN1	100	56.604	Pelodiscus_sinensis
ENSCHIG00000019425	-	100	69.892	ENSPEMG00000013944	Stn1	98	69.355	Peromyscus_maniculatus_bairdii
ENSCHIG00000019425	-	100	66.757	ENSPCIG00000024497	STN1	100	66.757	Phascolarctos_cinereus
ENSCHIG00000019425	-	100	81.671	ENSPPYG00000002628	STN1	100	81.081	Pongo_abelii
ENSCHIG00000019425	-	100	80.000	ENSPCOG00000017648	STN1	100	80.000	Propithecus_coquereli
ENSCHIG00000019425	-	100	82.703	ENSPVAG00000004187	STN1	100	81.892	Pteropus_vampyrus
ENSCHIG00000019425	-	100	68.733	ENSRNOG00000020376	Stn1	98	68.194	Rattus_norvegicus
ENSCHIG00000019425	-	100	81.402	ENSRBIG00000039819	STN1	100	80.811	Rhinopithecus_bieti
ENSCHIG00000019425	-	100	81.402	ENSRROG00000013903	STN1	100	80.811	Rhinopithecus_roxellana
ENSCHIG00000019425	-	100	82.973	ENSSBOG00000031516	STN1	100	82.703	Saimiri_boliviensis_boliviensis
ENSCHIG00000019425	-	100	64.324	ENSSHAG00000017550	STN1	100	64.324	Sarcophilus_harrisii
ENSCHIG00000019425	-	98	43.008	ENSSFOG00015004107	stn1	99	43.008	Scleropages_formosus
ENSCHIG00000019425	-	100	85.135	ENSSSCG00000010605	STN1	85	85.135	Sus_scrofa
ENSCHIG00000019425	-	100	54.667	ENSTGUG00000010354	STN1	100	54.424	Taeniopygia_guttata
ENSCHIG00000019425	-	100	42.627	ENSTNIG00000014162	stn1	98	42.627	Tetraodon_nigroviridis
ENSCHIG00000019425	-	66	78.431	ENSTBEG00000000659	STN1	66	78.431	Tupaia_belangeri
ENSCHIG00000019425	-	100	87.838	ENSTTRG00000003375	STN1	100	86.757	Tursiops_truncatus
ENSCHIG00000019425	-	100	73.315	ENSUMAG00000023647	STN1	100	72.776	Ursus_maritimus
ENSCHIG00000019425	-	100	87.027	ENSVPAG00000002530	STN1	100	85.946	Vicugna_pacos
ENSCHIG00000019425	-	100	79.301	ENSVVUG00000004636	-	60	78.763	Vulpes_vulpes
ENSCHIG00000019425	-	96	48.361	ENSXETG00000011402	STN1	98	47.945	Xenopus_tropicalis