EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000019448 (Gene tree)
Gene ID: 102173626
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 97243 bases
Position: chr25:22325058-22422300
Accession: 102173626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000021053	Ago_hook	PF10427.9	9.1e-19	1	1
ENSCHIP00000021074	Ago_hook	PF10427.9	1.7e-18	1	1
ENSCHIP00000021032	Ago_hook	PF10427.9	2e-18	1	1
ENSCHIP00000021010	Ago_hook	PF10427.9	2.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000028851	TNRC6A-201	8248	XM_018040459	ENSCHIP00000021010	1901 (aa)	XP_017895948	UPI000847847D
ENSCHIT00000028873	TNRC6A-202	7849	-	ENSCHIP00000021032	1768 (aa)	-	UPI000D18DE98
ENSCHIT00000028915	TNRC6A-204	5628	-	ENSCHIP00000021074	1875 (aa)	-	UPI000D18D893
ENSCHIT00000028894	TNRC6A-203	5205	-	ENSCHIP00000021053	1734 (aa)	-	UPI000D190874

Gene Model

Click here to download ENSCHIG00000019448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000019448	TNRC6A	88	48.504	ENSCHIG00000026004	TNRC6C	97	43.496
ENSCHIG00000019448	TNRC6A	94	36.468	ENSCHIG00000003491	TNRC6B	99	37.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019448	TNRC6A	100	95.224	ENSG00000090905	TNRC6A	100	95.034	Homo_sapiens
ENSCHIG00000019448	TNRC6A	99	92.312	ENSAMEG00000009333	TNRC6A	100	93.204	Ailuropoda_melanoleuca
ENSCHIG00000019448	TNRC6A	99	79.278	ENSAPLG00000009978	TNRC6A	100	79.278	Anas_platyrhynchos
ENSCHIG00000019448	TNRC6A	99	68.966	ENSACAG00000011857	TNRC6A	99	55.982	Anolis_carolinensis
ENSCHIG00000019448	TNRC6A	100	95.224	ENSANAG00000025252	TNRC6A	100	94.864	Aotus_nancymaae
ENSCHIG00000019448	TNRC6A	97	57.295	ENSAMXG00000019919	tnrc6a	99	57.076	Astyanax_mexicanus
ENSCHIG00000019448	TNRC6A	100	98.159	ENSBTAG00000017999	TNRC6A	100	98.159	Bos_taurus
ENSCHIG00000019448	TNRC6A	100	98.182	ENSCJAG00000020677	TNRC6A	100	93.402	Callithrix_jacchus
ENSCHIG00000019448	TNRC6A	99	95.909	ENSCAFG00000017531	TNRC6A	100	95.909	Canis_familiaris
ENSCHIG00000019448	TNRC6A	99	93.028	ENSCAFG00020021160	TNRC6A	99	94.184	Canis_lupus_dingo
ENSCHIG00000019448	TNRC6A	100	95.399	ENSTSYG00000012711	TNRC6A	100	95.233	Carlito_syrichta
ENSCHIG00000019448	TNRC6A	99	100.000	ENSCPOG00000036684	TNRC6A	100	94.532	Cavia_porcellus
ENSCHIG00000019448	TNRC6A	100	94.991	ENSCCAG00000033664	TNRC6A	100	94.921	Cebus_capucinus
ENSCHIG00000019448	TNRC6A	99	94.167	ENSCATG00000019284	TNRC6A	99	94.535	Cercocebus_atys
ENSCHIG00000019448	TNRC6A	100	90.856	ENSCLAG00000010217	TNRC6A	100	90.833	Chinchilla_lanigera
ENSCHIG00000019448	TNRC6A	100	92.525	ENSCSAG00000006561	TNRC6A	100	92.704	Chlorocebus_sabaeus
ENSCHIG00000019448	TNRC6A	95	87.338	ENSCHOG00000009374	TNRC6A	95	87.747	Choloepus_hoffmanni
ENSCHIG00000019448	TNRC6A	97	81.845	ENSCPBG00000001881	TNRC6A	99	81.845	Chrysemys_picta_bellii
ENSCHIG00000019448	TNRC6A	100	94.814	ENSCANG00000041549	TNRC6A	100	95.181	Colobus_angolensis_palliatus
ENSCHIG00000019448	TNRC6A	100	93.015	ENSCGRG00001015021	Tnrc6a	100	93.333	Cricetulus_griseus_chok1gshd
ENSCHIG00000019448	TNRC6A	99	92.433	ENSCGRG00000013351	Tnrc6a	99	92.441	Cricetulus_griseus_crigri
ENSCHIG00000019448	TNRC6A	96	56.997	ENSDARG00000079688	tnrc6a	99	56.973	Danio_rerio
ENSCHIG00000019448	TNRC6A	99	90.021	ENSDNOG00000013989	TNRC6A	99	90.466	Dasypus_novemcinctus
ENSCHIG00000019448	TNRC6A	99	84.255	ENSETEG00000014658	TNRC6A	99	84.349	Echinops_telfairi
ENSCHIG00000019448	TNRC6A	100	96.218	ENSEASG00005017693	TNRC6A	100	96.218	Equus_asinus_asinus
ENSCHIG00000019448	TNRC6A	99	96.164	ENSECAG00000025056	TNRC6A	100	96.164	Equus_caballus
ENSCHIG00000019448	TNRC6A	97	89.558	ENSEEUG00000004530	TNRC6A	99	86.520	Erinaceus_europaeus
ENSCHIG00000019448	TNRC6A	100	94.755	ENSFCAG00000025236	TNRC6A	100	94.541	Felis_catus
ENSCHIG00000019448	TNRC6A	97	78.592	ENSFALG00000003757	TNRC6A	93	87.037	Ficedula_albicollis
ENSCHIG00000019448	TNRC6A	97	81.934	ENSGALG00000006068	TNRC6A	99	82.687	Gallus_gallus
ENSCHIG00000019448	TNRC6A	97	81.167	ENSGAGG00000023209	TNRC6A	99	81.456	Gopherus_agassizii
ENSCHIG00000019448	TNRC6A	99	94.409	ENSGGOG00000005137	TNRC6A	99	94.831	Gorilla_gorilla
ENSCHIG00000019448	TNRC6A	97	74.052	ENSHGLG00000007368	-	93	73.655	Heterocephalus_glaber_female
ENSCHIG00000019448	TNRC6A	99	92.259	ENSHGLG00000012474	-	100	92.733	Heterocephalus_glaber_female
ENSCHIG00000019448	TNRC6A	99	92.255	ENSHGLG00100012496	-	100	92.518	Heterocephalus_glaber_male
ENSCHIG00000019448	TNRC6A	99	92.072	ENSSTOG00000023394	TNRC6A	99	91.853	Ictidomys_tridecemlineatus
ENSCHIG00000019448	TNRC6A	97	68.230	ENSLACG00000006277	TNRC6A	99	67.705	Latimeria_chalumnae
ENSCHIG00000019448	TNRC6A	99	85.816	ENSLOCG00000005517	tnrc6a	93	82.561	Lepisosteus_oculatus
ENSCHIG00000019448	TNRC6A	99	93.538	ENSLAFG00000004209	TNRC6A	100	93.646	Loxodonta_africana
ENSCHIG00000019448	TNRC6A	99	89.766	ENSMFAG00000003824	TNRC6A	99	91.223	Macaca_fascicularis
ENSCHIG00000019448	TNRC6A	100	95.108	ENSMMUG00000020428	TNRC6A	100	95.076	Macaca_mulatta
ENSCHIG00000019448	TNRC6A	100	95.050	ENSMNEG00000034854	TNRC6A	100	94.372	Macaca_nemestrina
ENSCHIG00000019448	TNRC6A	99	89.777	ENSMLEG00000042737	TNRC6A	97	90.881	Mandrillus_leucophaeus
ENSCHIG00000019448	TNRC6A	97	79.933	ENSMGAG00000006455	TNRC6A	93	87.037	Meleagris_gallopavo
ENSCHIG00000019448	TNRC6A	100	93.015	ENSMAUG00000012750	Tnrc6a	100	93.228	Mesocricetus_auratus
ENSCHIG00000019448	TNRC6A	100	96.273	ENSMICG00000030685	TNRC6A	100	95.609	Microcebus_murinus
ENSCHIG00000019448	TNRC6A	100	93.477	ENSMOCG00000000152	Tnrc6a	100	93.225	Microtus_ochrogaster
ENSCHIG00000019448	TNRC6A	99	79.301	ENSMODG00000016348	TNRC6A	99	79.582	Monodelphis_domestica
ENSCHIG00000019448	TNRC6A	99	91.415	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	91.574	Mus_caroli
ENSCHIG00000019448	TNRC6A	100	92.069	ENSMUSG00000052707	Tnrc6a	100	92.174	Mus_musculus
ENSCHIG00000019448	TNRC6A	99	92.267	MGP_PahariEiJ_G0013635	Tnrc6a	99	92.373	Mus_pahari
ENSCHIG00000019448	TNRC6A	100	89.807	MGP_SPRETEiJ_G0031539	Tnrc6a	100	90.064	Mus_spretus
ENSCHIG00000019448	TNRC6A	99	83.549	ENSMPUG00000012324	TNRC6A	100	83.765	Mustela_putorius_furo
ENSCHIG00000019448	TNRC6A	99	90.042	ENSMLUG00000002701	TNRC6A	100	89.989	Myotis_lucifugus
ENSCHIG00000019448	TNRC6A	99	94.470	ENSNGAG00000020702	Tnrc6a	100	94.482	Nannospalax_galili
ENSCHIG00000019448	TNRC6A	99	92.515	ENSNLEG00000011851	TNRC6A	99	92.423	Nomascus_leucogenys
ENSCHIG00000019448	TNRC6A	77	83.832	ENSMEUG00000015959	-	77	83.832	Notamacropus_eugenii
ENSCHIG00000019448	TNRC6A	95	97.938	ENSOPRG00000005819	TNRC6A	96	97.015	Ochotona_princeps
ENSCHIG00000019448	TNRC6A	99	88.023	ENSODEG00000012802	TNRC6A	99	88.500	Octodon_degus
ENSCHIG00000019448	TNRC6A	94	80.359	ENSOANG00000007672	TNRC6A	99	80.549	Ornithorhynchus_anatinus
ENSCHIG00000019448	TNRC6A	99	88.947	ENSOCUG00000004325	TNRC6A	100	89.316	Oryctolagus_cuniculus
ENSCHIG00000019448	TNRC6A	99	92.621	ENSOGAG00000006666	TNRC6A	100	92.828	Otolemur_garnettii
ENSCHIG00000019448	TNRC6A	98	99.311	ENSOARG00000017950	TNRC6A	100	99.311	Ovis_aries
ENSCHIG00000019448	TNRC6A	99	95.282	ENSPPAG00000028379	TNRC6A	100	94.885	Pan_paniscus
ENSCHIG00000019448	TNRC6A	100	94.755	ENSPPRG00000005861	TNRC6A	100	94.541	Panthera_pardus
ENSCHIG00000019448	TNRC6A	99	100.000	ENSPTIG00000006346	TNRC6A	99	93.564	Panthera_tigris_altaica
ENSCHIG00000019448	TNRC6A	99	91.693	ENSPTRG00000007898	TNRC6A	99	92.059	Pan_troglodytes
ENSCHIG00000019448	TNRC6A	100	92.545	ENSPANG00000018523	TNRC6A	100	92.484	Papio_anubis
ENSCHIG00000019448	TNRC6A	93	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSCHIG00000019448	TNRC6A	83	77.500	ENSPSIG00000003965	TNRC6A	100	77.973	Pelodiscus_sinensis
ENSCHIG00000019448	TNRC6A	100	93.186	ENSPEMG00000016318	Tnrc6a	100	93.060	Peromyscus_maniculatus_bairdii
ENSCHIG00000019448	TNRC6A	97	84.951	ENSPCIG00000012106	TNRC6A	100	82.648	Phascolarctos_cinereus
ENSCHIG00000019448	TNRC6A	99	92.072	ENSPPYG00000007202	TNRC6A	100	91.947	Pongo_abelii
ENSCHIG00000019448	TNRC6A	94	98.148	ENSPCAG00000008260	TNRC6A	94	93.814	Procavia_capensis
ENSCHIG00000019448	TNRC6A	100	93.244	ENSPCOG00000010134	TNRC6A	100	93.201	Propithecus_coquereli
ENSCHIG00000019448	TNRC6A	97	69.235	ENSPVAG00000012066	TNRC6A	99	69.925	Pteropus_vampyrus
ENSCHIG00000019448	TNRC6A	100	92.666	ENSRNOG00000024737	Tnrc6a	100	92.280	Rattus_norvegicus
ENSCHIG00000019448	TNRC6A	99	94.343	ENSRBIG00000014222	TNRC6A	99	94.895	Rhinopithecus_bieti
ENSCHIG00000019448	TNRC6A	99	94.694	ENSRROG00000032360	TNRC6A	100	92.835	Rhinopithecus_roxellana
ENSCHIG00000019448	TNRC6A	99	91.426	ENSSBOG00000036197	TNRC6A	100	93.037	Saimiri_boliviensis_boliviensis
ENSCHIG00000019448	TNRC6A	97	83.400	ENSSHAG00000008811	TNRC6A	99	84.144	Sarcophilus_harrisii
ENSCHIG00000019448	TNRC6A	97	58.158	ENSSFOG00015008920	tnrc6a	100	57.673	Scleropages_formosus
ENSCHIG00000019448	TNRC6A	78	76.381	ENSSARG00000002479	TNRC6A	89	76.733	Sorex_araneus
ENSCHIG00000019448	TNRC6A	97	77.330	ENSSPUG00000010525	TNRC6A	100	77.893	Sphenodon_punctatus
ENSCHIG00000019448	TNRC6A	99	97.117	ENSSSCG00000038870	TNRC6A	100	97.227	Sus_scrofa
ENSCHIG00000019448	TNRC6A	99	79.624	ENSTGUG00000006142	TNRC6A	100	79.990	Taeniopygia_guttata
ENSCHIG00000019448	TNRC6A	99	89.133	ENSTBEG00000014965	TNRC6A	100	89.446	Tupaia_belangeri
ENSCHIG00000019448	TNRC6A	90	95.365	ENSTTRG00000002008	TNRC6A	93	92.233	Tursiops_truncatus
ENSCHIG00000019448	TNRC6A	86	94.990	ENSUAMG00000006656	-	93	95.458	Ursus_americanus
ENSCHIG00000019448	TNRC6A	99	92.267	ENSUMAG00000008274	TNRC6A	100	96.504	Ursus_maritimus
ENSCHIG00000019448	TNRC6A	55	85.572	ENSVPAG00000010764	-	57	85.572	Vicugna_pacos
ENSCHIG00000019448	TNRC6A	99	95.877	ENSVVUG00000005380	TNRC6A	99	95.877	Vulpes_vulpes
ENSCHIG00000019448	TNRC6A	99	62.991	ENSXETG00000030437	TNRC6A	99	63.827	Xenopus_tropicalis