EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000019462 (Gene tree)
Gene ID: 102180007
Gene Symbol: HELLS
Alias: LSH|Nbla10143|PASG|SMARCA6
Full Name: helicase%2C lymphoid specific
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 35911 bases
Position: chr26:35558282-35594192
Accession: 102180007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000021045	ResIII	PF04851.15	2e-07	1	1
ENSCHIP00000021039	ResIII	PF04851.15	3.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000028886	HELLS-202	2418	-	ENSCHIP00000021045	805 (aa)	-	UPI000D18D9EA
ENSCHIT00000028880	HELLS-201	2475	XM_005698236	ENSCHIP00000021039	824 (aa)	XP_005698293	UPI000D193895

Gene Model

Click here to download ENSCHIG00000019462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000019462	HELLS	55	35.922	ENSCHIG00000008230	-	52	35.922
ENSCHIG00000019462	HELLS	56	36.321	ENSCHIG00000020118	RAD54L	64	36.321
ENSCHIG00000019462	HELLS	67	38.674	ENSCHIG00000013871	CHD1L	52	38.674
ENSCHIG00000019462	HELLS	67	37.887	ENSCHIG00000012905	SMARCAD1	51	37.887

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019462	HELLS	100	90.931	ENSG00000119969	HELLS	100	93.120	Homo_sapiens
ENSCHIG00000019462	HELLS	95	65.464	ENSAPOG00000007707	hells	95	65.007	Acanthochromis_polyacanthus
ENSCHIG00000019462	HELLS	100	91.885	ENSAMEG00000013525	HELLS	100	91.885	Ailuropoda_melanoleuca
ENSCHIG00000019462	HELLS	84	68.088	ENSACIG00000018996	hells	99	67.236	Amphilophus_citrinellus
ENSCHIG00000019462	HELLS	96	65.508	ENSAOCG00000006348	hells	97	64.347	Amphiprion_ocellaris
ENSCHIG00000019462	HELLS	96	65.637	ENSAPEG00000001422	hells	97	63.980	Amphiprion_percula
ENSCHIG00000019462	HELLS	98	64.087	ENSATEG00000008107	hells	99	64.987	Anabas_testudineus
ENSCHIG00000019462	HELLS	96	80.255	ENSAPLG00000002649	HELLS	99	79.745	Anas_platyrhynchos
ENSCHIG00000019462	HELLS	90	73.177	ENSACAG00000028785	HELLS	95	74.230	Anolis_carolinensis
ENSCHIG00000019462	HELLS	100	89.845	ENSANAG00000034765	-	97	93.787	Aotus_nancymaae
ENSCHIG00000019462	HELLS	96	64.781	ENSACLG00000007613	hells	99	64.573	Astatotilapia_calliptera
ENSCHIG00000019462	HELLS	85	67.103	ENSAMXG00000002088	hells	96	67.964	Astyanax_mexicanus
ENSCHIG00000019462	HELLS	83	99.553	ENSBTAG00000005979	HELLS	100	99.553	Bos_taurus
ENSCHIG00000019462	HELLS	100	90.442	ENSCJAG00000015819	HELLS	97	94.100	Callithrix_jacchus
ENSCHIG00000019462	HELLS	100	91.538	ENSCAFG00000008090	HELLS	100	91.538	Canis_familiaris
ENSCHIG00000019462	HELLS	97	93.316	ENSCAFG00020004809	HELLS	99	92.976	Canis_lupus_dingo
ENSCHIG00000019462	HELLS	98	89.927	ENSTSYG00000005811	-	97	93.639	Carlito_syrichta
ENSCHIG00000019462	HELLS	100	88.783	ENSCPOG00000003043	HELLS	100	88.783	Cavia_porcellus
ENSCHIG00000019462	HELLS	58	93.642	ENSCCAG00000026761	HELLS	99	93.642	Cebus_capucinus
ENSCHIG00000019462	HELLS	100	86.070	ENSCATG00000033830	HELLS	100	92.567	Cercocebus_atys
ENSCHIG00000019462	HELLS	100	89.379	ENSCLAG00000003938	HELLS	100	89.903	Chinchilla_lanigera
ENSCHIG00000019462	HELLS	88	92.426	ENSCSAG00000006181	HELLS	100	92.426	Chlorocebus_sabaeus
ENSCHIG00000019462	HELLS	88	82.609	ENSCPBG00000025739	HELLS	99	83.752	Chrysemys_picta_bellii
ENSCHIG00000019462	HELLS	100	85.941	ENSCANG00000037736	HELLS	100	92.556	Colobus_angolensis_palliatus
ENSCHIG00000019462	HELLS	98	88.739	ENSCGRG00001017410	Hells	100	88.739	Cricetulus_griseus_chok1gshd
ENSCHIG00000019462	HELLS	95	64.387	ENSCSEG00000016985	hells	99	64.378	Cynoglossus_semilaevis
ENSCHIG00000019462	HELLS	65	62.786	ENSCVAG00000000159	hells	97	63.138	Cyprinodon_variegatus
ENSCHIG00000019462	HELLS	96	65.857	ENSDARG00000057738	hells	94	65.513	Danio_rerio
ENSCHIG00000019462	HELLS	79	94.471	ENSDNOG00000017758	HELLS	100	94.471	Dasypus_novemcinctus
ENSCHIG00000019462	HELLS	100	87.694	ENSDORG00000011812	Hells	100	87.694	Dipodomys_ordii
ENSCHIG00000019462	HELLS	75	53.947	ENSEBUG00000016152	hells	93	53.947	Eptatretus_burgeri
ENSCHIG00000019462	HELLS	100	92.243	ENSEASG00005011764	HELLS	100	93.842	Equus_asinus_asinus
ENSCHIG00000019462	HELLS	100	92.234	ENSECAG00000018810	HELLS	100	92.234	Equus_caballus
ENSCHIG00000019462	HELLS	73	95.652	ENSEEUG00000007680	HELLS	76	95.652	Erinaceus_europaeus
ENSCHIG00000019462	HELLS	96	65.083	ENSELUG00000014909	hells	93	64.170	Esox_lucius
ENSCHIG00000019462	HELLS	88	93.548	ENSFCAG00000005206	HELLS	100	93.689	Felis_catus
ENSCHIG00000019462	HELLS	97	80.098	ENSFALG00000007136	HELLS	99	79.487	Ficedula_albicollis
ENSCHIG00000019462	HELLS	98	88.916	ENSFDAG00000010042	HELLS	100	89.659	Fukomys_damarensis
ENSCHIG00000019462	HELLS	97	63.772	ENSFHEG00000022950	hells	92	65.970	Fundulus_heteroclitus
ENSCHIG00000019462	HELLS	100	77.354	ENSGALG00000005451	HELLS	100	81.519	Gallus_gallus
ENSCHIG00000019462	HELLS	96	64.031	ENSGAFG00000001204	hells	94	63.478	Gambusia_affinis
ENSCHIG00000019462	HELLS	96	63.368	ENSGACG00000003897	hells	91	63.578	Gasterosteus_aculeatus
ENSCHIG00000019462	HELLS	88	82.303	ENSGAGG00000010269	HELLS	99	83.432	Gopherus_agassizii
ENSCHIG00000019462	HELLS	100	86.396	ENSGGOG00000008103	HELLS	100	92.577	Gorilla_gorilla
ENSCHIG00000019462	HELLS	96	65.262	ENSHBUG00000010270	hells	99	64.573	Haplochromis_burtoni
ENSCHIG00000019462	HELLS	75	86.196	ENSHGLG00000006537	-	99	86.196	Heterocephalus_glaber_female
ENSCHIG00000019462	HELLS	98	89.903	ENSHGLG00000011377	-	100	89.903	Heterocephalus_glaber_female
ENSCHIG00000019462	HELLS	98	89.659	ENSHGLG00100017230	-	100	89.659	Heterocephalus_glaber_male
ENSCHIG00000019462	HELLS	89	80.999	ENSHGLG00100001957	-	94	80.583	Heterocephalus_glaber_male
ENSCHIG00000019462	HELLS	87	65.629	ENSHCOG00000001119	hells	96	65.864	Hippocampus_comes
ENSCHIG00000019462	HELLS	97	64.444	ENSIPUG00000002634	HELLS	95	64.286	Ictalurus_punctatus
ENSCHIG00000019462	HELLS	98	91.241	ENSSTOG00000021976	HELLS	100	91.241	Ictidomys_tridecemlineatus
ENSCHIG00000019462	HELLS	100	85.437	ENSJJAG00000000865	Hells	99	86.957	Jaculus_jaculus
ENSCHIG00000019462	HELLS	98	64.259	ENSKMAG00000017279	hells	96	64.504	Kryptolebias_marmoratus
ENSCHIG00000019462	HELLS	96	65.888	ENSLBEG00000027807	hells	95	65.081	Labrus_bergylta
ENSCHIG00000019462	HELLS	98	90.998	ENSLAFG00000007049	HELLS	100	90.998	Loxodonta_africana
ENSCHIG00000019462	HELLS	100	90.800	ENSMFAG00000044053	HELLS	99	92.672	Macaca_fascicularis
ENSCHIG00000019462	HELLS	100	85.517	ENSMMUG00000017255	HELLS	100	92.672	Macaca_mulatta
ENSCHIG00000019462	HELLS	100	86.070	ENSMNEG00000042628	HELLS	100	92.567	Macaca_nemestrina
ENSCHIG00000019462	HELLS	100	90.800	ENSMLEG00000041751	HELLS	99	92.672	Mandrillus_leucophaeus
ENSCHIG00000019462	HELLS	96	63.789	ENSMAMG00000009850	hells	99	65.562	Mastacembelus_armatus
ENSCHIG00000019462	HELLS	96	65.262	ENSMZEG00005018414	hells	99	64.573	Maylandia_zebra
ENSCHIG00000019462	HELLS	96	79.140	ENSMGAG00000006818	HELLS	99	78.180	Meleagris_gallopavo
ENSCHIG00000019462	HELLS	96	88.946	ENSMAUG00000021941	Hells	97	88.466	Mesocricetus_auratus
ENSCHIG00000019462	HELLS	71	93.206	ENSMICG00000046554	-	94	93.097	Microcebus_murinus
ENSCHIG00000019462	HELLS	98	87.315	ENSMOCG00000019342	Hells	100	87.192	Microtus_ochrogaster
ENSCHIG00000019462	HELLS	98	60.000	ENSMMOG00000007950	hells	98	59.902	Mola_mola
ENSCHIG00000019462	HELLS	96	83.397	ENSMODG00000005589	-	51	82.603	Monodelphis_domestica
ENSCHIG00000019462	HELLS	96	63.144	ENSMALG00000010244	hells	94	62.940	Monopterus_albus
ENSCHIG00000019462	HELLS	98	88.206	MGP_CAROLIEiJ_G0022930	Hells	100	88.185	Mus_caroli
ENSCHIG00000019462	HELLS	98	88.185	ENSMUSG00000025001	Hells	100	88.185	Mus_musculus
ENSCHIG00000019462	HELLS	98	89.160	MGP_PahariEiJ_G0014423	Hells	100	89.160	Mus_pahari
ENSCHIG00000019462	HELLS	98	88.708	MGP_SPRETEiJ_G0023848	Hells	100	88.551	Mus_spretus
ENSCHIG00000019462	HELLS	100	91.517	ENSMPUG00000017131	HELLS	100	91.517	Mustela_putorius_furo
ENSCHIG00000019462	HELLS	100	86.619	ENSMLUG00000030511	HELLS	100	87.814	Myotis_lucifugus
ENSCHIG00000019462	HELLS	100	88.305	ENSNGAG00000014049	Hells	100	88.305	Nannospalax_galili
ENSCHIG00000019462	HELLS	96	61.697	ENSNBRG00000024242	hells	99	61.278	Neolamprologus_brichardi
ENSCHIG00000019462	HELLS	100	86.410	ENSNLEG00000012987	HELLS	100	92.847	Nomascus_leucogenys
ENSCHIG00000019462	HELLS	100	86.754	ENSODEG00000015916	HELLS	100	86.754	Octodon_degus
ENSCHIG00000019462	HELLS	96	64.879	ENSONIG00000013166	hells	94	64.384	Oreochromis_niloticus
ENSCHIG00000019462	HELLS	98	81.852	ENSOANG00000005139	HELLS	100	81.840	Ornithorhynchus_anatinus
ENSCHIG00000019462	HELLS	100	90.442	ENSOCUG00000026731	HELLS	100	90.442	Oryctolagus_cuniculus
ENSCHIG00000019462	HELLS	97	64.639	ENSORLG00000000987	hells	96	63.614	Oryzias_latipes
ENSCHIG00000019462	HELLS	97	64.385	ENSORLG00020003952	hells	96	63.363	Oryzias_latipes_hni
ENSCHIG00000019462	HELLS	97	65.019	ENSORLG00015010960	hells	96	63.488	Oryzias_latipes_hsok
ENSCHIG00000019462	HELLS	96	64.194	ENSOMEG00000000135	hells	94	64.172	Oryzias_melastigma
ENSCHIG00000019462	HELLS	99	89.734	ENSOGAG00000017145	HELLS	99	89.734	Otolemur_garnettii
ENSCHIG00000019462	HELLS	100	96.535	ENSOARG00000004495	HELLS	100	96.535	Ovis_aries
ENSCHIG00000019462	HELLS	100	86.277	ENSPPAG00000001726	HELLS	100	92.437	Pan_paniscus
ENSCHIG00000019462	HELLS	88	93.408	ENSPPRG00000005839	HELLS	100	93.548	Panthera_pardus
ENSCHIG00000019462	HELLS	100	91.756	ENSPTIG00000007647	HELLS	100	93.548	Panthera_tigris_altaica
ENSCHIG00000019462	HELLS	100	86.277	ENSPTRG00000002778	HELLS	97	94.379	Pan_troglodytes
ENSCHIG00000019462	HELLS	100	86.070	ENSPANG00000033528	HELLS	100	92.567	Papio_anubis
ENSCHIG00000019462	HELLS	98	63.139	ENSPKIG00000010890	hells	98	62.903	Paramormyrops_kingsleyae
ENSCHIG00000019462	HELLS	96	79.772	ENSPSIG00000005462	HELLS	100	79.924	Pelodiscus_sinensis
ENSCHIG00000019462	HELLS	97	61.395	ENSPMGG00000014690	hells	99	65.286	Periophthalmus_magnuspinnatus
ENSCHIG00000019462	HELLS	100	80.672	ENSPEMG00000017579	Hells	100	80.877	Peromyscus_maniculatus_bairdii
ENSCHIG00000019462	HELLS	97	60.427	ENSPMAG00000004376	hells	98	60.296	Petromyzon_marinus
ENSCHIG00000019462	HELLS	100	82.283	ENSPCIG00000013361	HELLS	100	82.283	Phascolarctos_cinereus
ENSCHIG00000019462	HELLS	96	63.104	ENSPFOG00000001954	hells	94	62.903	Poecilia_formosa
ENSCHIG00000019462	HELLS	96	62.850	ENSPLAG00000006504	hells	99	63.077	Poecilia_latipinna
ENSCHIG00000019462	HELLS	96	62.977	ENSPMEG00000003024	hells	99	63.217	Poecilia_mexicana
ENSCHIG00000019462	HELLS	96	62.850	ENSPREG00000020337	hells	94	62.655	Poecilia_reticulata
ENSCHIG00000019462	HELLS	100	86.199	ENSPPYG00000002502	HELLS	100	86.199	Pongo_abelii
ENSCHIG00000019462	HELLS	100	83.353	ENSPCAG00000013618	HELLS	100	83.353	Procavia_capensis
ENSCHIG00000019462	HELLS	100	90.203	ENSPCOG00000023985	HELLS	99	93.678	Propithecus_coquereli
ENSCHIG00000019462	HELLS	92	95.028	ENSPVAG00000017899	HELLS	92	95.028	Pteropus_vampyrus
ENSCHIG00000019462	HELLS	96	63.871	ENSPNYG00000009100	hells	99	63.396	Pundamilia_nyererei
ENSCHIG00000019462	HELLS	94	64.020	ENSPNAG00000029968	hells	95	63.364	Pygocentrus_nattereri
ENSCHIG00000019462	HELLS	100	88.530	ENSRNOG00000047692	LOC100911660	100	88.916	Rattus_norvegicus
ENSCHIG00000019462	HELLS	100	88.530	ENSRNOG00000047104	Hells	100	88.530	Rattus_norvegicus
ENSCHIG00000019462	HELLS	100	87.343	ENSRBIG00000041080	HELLS	99	94.248	Rhinopithecus_bieti
ENSCHIG00000019462	HELLS	100	86.369	ENSRROG00000040169	HELLS	100	92.286	Rhinopithecus_roxellana
ENSCHIG00000019462	HELLS	98	81.939	ENSSHAG00000014358	HELLS	100	82.788	Sarcophilus_harrisii
ENSCHIG00000019462	HELLS	96	66.582	ENSSFOG00015017895	hells	97	65.633	Scleropages_formosus
ENSCHIG00000019462	HELLS	96	65.419	ENSSMAG00000017423	hells	99	64.322	Scophthalmus_maximus
ENSCHIG00000019462	HELLS	96	65.464	ENSSDUG00000016924	hells	99	65.239	Seriola_dumerili
ENSCHIG00000019462	HELLS	96	63.508	ENSSLDG00000018960	hells	94	62.995	Seriola_lalandi_dorsalis
ENSCHIG00000019462	HELLS	98	80.247	ENSSPUG00000017425	HELLS	99	80.370	Sphenodon_punctatus
ENSCHIG00000019462	HELLS	94	66.026	ENSSPAG00000015579	hells	97	66.518	Stegastes_partitus
ENSCHIG00000019462	HELLS	100	92.473	ENSSSCG00000010486	HELLS	100	92.473	Sus_scrofa
ENSCHIG00000019462	HELLS	99	79.493	ENSTGUG00000007157	HELLS	99	79.011	Taeniopygia_guttata
ENSCHIG00000019462	HELLS	96	66.023	ENSTRUG00000000350	hells	96	65.245	Takifugu_rubripes
ENSCHIG00000019462	HELLS	96	56.407	ENSTNIG00000003738	hells	98	56.484	Tetraodon_nigroviridis
ENSCHIG00000019462	HELLS	98	93.374	ENSUAMG00000003343	HELLS	100	93.374	Ursus_americanus
ENSCHIG00000019462	HELLS	99	92.280	ENSUMAG00000004748	HELLS	100	93.276	Ursus_maritimus
ENSCHIG00000019462	HELLS	100	91.627	ENSVPAG00000010115	HELLS	100	91.627	Vicugna_pacos
ENSCHIG00000019462	HELLS	100	92.115	ENSVVUG00000022808	HELLS	100	92.115	Vulpes_vulpes
ENSCHIG00000019462	HELLS	96	63.531	ENSXCOG00000013840	hells	98	62.408	Xiphophorus_couchianus
ENSCHIG00000019462	HELLS	96	63.104	ENSXMAG00000005731	hells	97	64.865	Xiphophorus_maculatus