EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000019479 (Gene tree)
Gene ID: 102188042
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 16397 bases
Position: chr8:61267297-61283693
Accession: 102188042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000021029	RNA_pol_I_A49	PF06870.12	7.2e-112	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000028870	POLR1E-201	1364	XM_005683878	ENSCHIP00000021029	419 (aa)	XP_005683935	UPI000846C0C7

Gene Model

Click here to download ENSCHIG00000019479's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019479	POLR1E	100	86.158	ENSG00000137054	POLR1E	100	86.158	Homo_sapiens
ENSCHIG00000019479	POLR1E	98	43.237	ENSAPOG00000012452	polr1e	99	43.237	Acanthochromis_polyacanthus
ENSCHIG00000019479	POLR1E	100	78.280	ENSAMEG00000010193	POLR1E	97	78.280	Ailuropoda_melanoleuca
ENSCHIG00000019479	POLR1E	93	44.670	ENSACIG00000009884	polr1e	99	44.670	Amphilophus_citrinellus
ENSCHIG00000019479	POLR1E	98	46.135	ENSAOCG00000005665	polr1e	99	46.135	Amphiprion_ocellaris
ENSCHIG00000019479	POLR1E	98	46.377	ENSAPEG00000020581	polr1e	99	46.377	Amphiprion_percula
ENSCHIG00000019479	POLR1E	97	47.794	ENSATEG00000020609	polr1e	98	47.794	Anabas_testudineus
ENSCHIG00000019479	POLR1E	80	56.316	ENSAPLG00000010340	POLR1E	99	56.316	Anas_platyrhynchos
ENSCHIG00000019479	POLR1E	100	85.919	ENSANAG00000038046	POLR1E	100	85.919	Aotus_nancymaae
ENSCHIG00000019479	POLR1E	98	44.928	ENSACLG00000013685	polr1e	98	44.928	Astatotilapia_calliptera
ENSCHIG00000019479	POLR1E	97	42.233	ENSAMXG00000018181	polr1e	98	42.233	Astyanax_mexicanus
ENSCHIG00000019479	POLR1E	100	96.181	ENSBTAG00000012243	POLR1E	100	96.181	Bos_taurus
ENSCHIG00000019479	POLR1E	95	82.576	ENSCJAG00000010512	POLR1E	93	87.166	Callithrix_jacchus
ENSCHIG00000019479	POLR1E	100	87.351	ENSCAFG00000002377	POLR1E	100	87.351	Canis_familiaris
ENSCHIG00000019479	POLR1E	100	87.589	ENSCAFG00020017851	POLR1E	100	87.589	Canis_lupus_dingo
ENSCHIG00000019479	POLR1E	100	85.203	ENSTSYG00000002075	POLR1E	100	85.203	Carlito_syrichta
ENSCHIG00000019479	POLR1E	68	84.669	ENSCAPG00000015653	POLR1E	99	84.669	Cavia_aperea
ENSCHIG00000019479	POLR1E	99	84.211	ENSCPOG00000009965	POLR1E	100	84.211	Cavia_porcellus
ENSCHIG00000019479	POLR1E	100	78.520	ENSCCAG00000029460	POLR1E	100	78.520	Cebus_capucinus
ENSCHIG00000019479	POLR1E	100	85.919	ENSCATG00000031732	POLR1E	100	85.919	Cercocebus_atys
ENSCHIG00000019479	POLR1E	87	87.158	ENSCLAG00000012701	POLR1E	96	87.158	Chinchilla_lanigera
ENSCHIG00000019479	POLR1E	100	85.442	ENSCSAG00000010782	POLR1E	100	85.442	Chlorocebus_sabaeus
ENSCHIG00000019479	POLR1E	95	76.010	ENSCHOG00000013024	POLR1E	83	76.010	Choloepus_hoffmanni
ENSCHIG00000019479	POLR1E	98	65.937	ENSCPBG00000006923	POLR1E	99	66.910	Chrysemys_picta_bellii
ENSCHIG00000019479	POLR1E	100	85.919	ENSCANG00000036112	POLR1E	100	85.919	Colobus_angolensis_palliatus
ENSCHIG00000019479	POLR1E	99	81.100	ENSCGRG00001006197	Polr1e	96	81.100	Cricetulus_griseus_chok1gshd
ENSCHIG00000019479	POLR1E	99	80.622	ENSCGRG00000006430	Polr1e	96	80.622	Cricetulus_griseus_crigri
ENSCHIG00000019479	POLR1E	94	44.304	ENSCSEG00000005121	polr1e	96	44.304	Cynoglossus_semilaevis
ENSCHIG00000019479	POLR1E	97	44.390	ENSCVAG00000019759	polr1e	98	44.390	Cyprinodon_variegatus
ENSCHIG00000019479	POLR1E	94	45.844	ENSDARG00000006434	polr1e	98	44.903	Danio_rerio
ENSCHIG00000019479	POLR1E	100	75.641	ENSDNOG00000010257	POLR1E	99	75.641	Dasypus_novemcinctus
ENSCHIG00000019479	POLR1E	85	81.285	ENSETEG00000018204	POLR1E	99	81.285	Echinops_telfairi
ENSCHIG00000019479	POLR1E	100	89.260	ENSEASG00005000675	POLR1E	100	89.260	Equus_asinus_asinus
ENSCHIG00000019479	POLR1E	100	89.499	ENSECAG00000014669	POLR1E	100	89.499	Equus_caballus
ENSCHIG00000019479	POLR1E	95	74.623	ENSEEUG00000011928	POLR1E	85	74.623	Erinaceus_europaeus
ENSCHIG00000019479	POLR1E	97	47.059	ENSELUG00000008150	polr1e	97	47.059	Esox_lucius
ENSCHIG00000019479	POLR1E	100	87.351	ENSFCAG00000013081	POLR1E	100	87.351	Felis_catus
ENSCHIG00000019479	POLR1E	95	60.705	ENSFALG00000012950	POLR1E	99	60.705	Ficedula_albicollis
ENSCHIG00000019479	POLR1E	99	85.407	ENSFDAG00000016917	POLR1E	100	85.407	Fukomys_damarensis
ENSCHIG00000019479	POLR1E	98	45.060	ENSFHEG00000009801	polr1e	99	45.060	Fundulus_heteroclitus
ENSCHIG00000019479	POLR1E	93	38.987	ENSGMOG00000003336	POLR1E	93	39.899	Gadus_morhua
ENSCHIG00000019479	POLR1E	98	61.557	ENSGALG00000005395	POLR1E	99	61.557	Gallus_gallus
ENSCHIG00000019479	POLR1E	97	45.833	ENSGAFG00000004850	polr1e	98	45.833	Gambusia_affinis
ENSCHIG00000019479	POLR1E	97	43.309	ENSGACG00000016087	polr1e	98	43.309	Gasterosteus_aculeatus
ENSCHIG00000019479	POLR1E	98	60.097	ENSGAGG00000001659	POLR1E	98	60.145	Gopherus_agassizii
ENSCHIG00000019479	POLR1E	100	85.919	ENSGGOG00000001882	POLR1E	100	85.919	Gorilla_gorilla
ENSCHIG00000019479	POLR1E	98	45.169	ENSHBUG00000002559	polr1e	98	45.169	Haplochromis_burtoni
ENSCHIG00000019479	POLR1E	99	85.885	ENSHGLG00000002036	POLR1E	100	85.885	Heterocephalus_glaber_female
ENSCHIG00000019479	POLR1E	99	86.124	ENSHGLG00100012784	POLR1E	100	86.124	Heterocephalus_glaber_male
ENSCHIG00000019479	POLR1E	97	44.118	ENSHCOG00000002774	polr1e	98	44.118	Hippocampus_comes
ENSCHIG00000019479	POLR1E	97	43.204	ENSIPUG00000003019	polr1e	98	43.204	Ictalurus_punctatus
ENSCHIG00000019479	POLR1E	100	84.487	ENSSTOG00000009810	POLR1E	100	84.487	Ictidomys_tridecemlineatus
ENSCHIG00000019479	POLR1E	99	81.490	ENSJJAG00000020731	Polr1e	96	81.490	Jaculus_jaculus
ENSCHIG00000019479	POLR1E	98	43.301	ENSKMAG00000000046	polr1e	99	43.301	Kryptolebias_marmoratus
ENSCHIG00000019479	POLR1E	97	46.173	ENSLBEG00000003104	polr1e	97	46.420	Labrus_bergylta
ENSCHIG00000019479	POLR1E	85	62.881	ENSLACG00000003416	POLR1E	99	62.881	Latimeria_chalumnae
ENSCHIG00000019479	POLR1E	99	50.120	ENSLOCG00000012859	polr1e	99	50.120	Lepisosteus_oculatus
ENSCHIG00000019479	POLR1E	100	86.635	ENSLAFG00000012831	POLR1E	99	86.635	Loxodonta_africana
ENSCHIG00000019479	POLR1E	100	86.158	ENSMFAG00000045465	POLR1E	100	81.395	Macaca_fascicularis
ENSCHIG00000019479	POLR1E	100	86.158	ENSMMUG00000017892	POLR1E	100	86.158	Macaca_mulatta
ENSCHIG00000019479	POLR1E	100	79.673	ENSMNEG00000040283	POLR1E	100	86.607	Macaca_nemestrina
ENSCHIG00000019479	POLR1E	100	86.158	ENSMLEG00000031135	POLR1E	100	86.158	Mandrillus_leucophaeus
ENSCHIG00000019479	POLR1E	97	46.814	ENSMAMG00000001260	polr1e	97	46.814	Mastacembelus_armatus
ENSCHIG00000019479	POLR1E	98	45.169	ENSMZEG00005021536	polr1e	98	45.169	Maylandia_zebra
ENSCHIG00000019479	POLR1E	100	79.714	ENSMAUG00000021044	Polr1e	97	79.714	Mesocricetus_auratus
ENSCHIG00000019479	POLR1E	100	87.589	ENSMICG00000003673	POLR1E	100	87.589	Microcebus_murinus
ENSCHIG00000019479	POLR1E	99	80.861	ENSMOCG00000012920	Polr1e	96	80.861	Microtus_ochrogaster
ENSCHIG00000019479	POLR1E	94	46.212	ENSMMOG00000007391	polr1e	96	46.212	Mola_mola
ENSCHIG00000019479	POLR1E	95	75.253	ENSMODG00000002884	POLR1E	97	75.253	Monodelphis_domestica
ENSCHIG00000019479	POLR1E	97	46.944	ENSMALG00000002665	polr1e	97	46.944	Monopterus_albus
ENSCHIG00000019479	POLR1E	99	77.831	MGP_CAROLIEiJ_G0025967	Polr1e	97	78.734	Mus_caroli
ENSCHIG00000019479	POLR1E	99	78.554	ENSMUSG00000028318	Polr1e	97	79.241	Mus_musculus
ENSCHIG00000019479	POLR1E	99	79.759	MGP_PahariEiJ_G0024114	Polr1e	97	80.506	Mus_pahari
ENSCHIG00000019479	POLR1E	99	78.072	MGP_SPRETEiJ_G0026930	Polr1e	97	78.734	Mus_spretus
ENSCHIG00000019479	POLR1E	100	78.252	ENSMPUG00000006040	POLR1E	99	78.038	Mustela_putorius_furo
ENSCHIG00000019479	POLR1E	100	87.112	ENSMLUG00000012688	POLR1E	97	87.112	Myotis_lucifugus
ENSCHIG00000019479	POLR1E	98	83.942	ENSNGAG00000002520	Polr1e	95	83.942	Nannospalax_galili
ENSCHIG00000019479	POLR1E	99	44.893	ENSNBRG00000016822	polr1e	99	44.893	Neolamprologus_brichardi
ENSCHIG00000019479	POLR1E	100	86.158	ENSNLEG00000003616	POLR1E	100	86.158	Nomascus_leucogenys
ENSCHIG00000019479	POLR1E	73	81.250	ENSMEUG00000015372	-	80	81.250	Notamacropus_eugenii
ENSCHIG00000019479	POLR1E	86	74.373	ENSOPRG00000014206	POLR1E	100	74.373	Ochotona_princeps
ENSCHIG00000019479	POLR1E	99	85.885	ENSODEG00000014565	POLR1E	97	85.885	Octodon_degus
ENSCHIG00000019479	POLR1E	98	45.673	ENSONIG00000008921	polr1e	98	45.652	Oreochromis_niloticus
ENSCHIG00000019479	POLR1E	100	82.100	ENSOCUG00000024773	POLR1E	100	82.100	Oryctolagus_cuniculus
ENSCHIG00000019479	POLR1E	98	45.894	ENSORLG00000005143	polr1e	99	45.894	Oryzias_latipes
ENSCHIG00000019479	POLR1E	92	45.269	ENSORLG00020007271	polr1e	99	45.269	Oryzias_latipes_hni
ENSCHIG00000019479	POLR1E	98	45.652	ENSORLG00015000137	polr1e	99	45.652	Oryzias_latipes_hsok
ENSCHIG00000019479	POLR1E	97	44.853	ENSOMEG00000013264	polr1e	96	44.853	Oryzias_melastigma
ENSCHIG00000019479	POLR1E	100	88.305	ENSOGAG00000012981	POLR1E	98	88.305	Otolemur_garnettii
ENSCHIG00000019479	POLR1E	100	99.045	ENSOARG00000011465	POLR1E	97	99.045	Ovis_aries
ENSCHIG00000019479	POLR1E	100	86.396	ENSPPAG00000034566	POLR1E	100	86.396	Pan_paniscus
ENSCHIG00000019479	POLR1E	100	88.067	ENSPPRG00000005649	POLR1E	100	88.067	Panthera_pardus
ENSCHIG00000019479	POLR1E	100	88.067	ENSPTIG00000009774	POLR1E	100	88.067	Panthera_tigris_altaica
ENSCHIG00000019479	POLR1E	100	86.396	ENSPTRG00000020944	POLR1E	100	86.396	Pan_troglodytes
ENSCHIG00000019479	POLR1E	100	86.158	ENSPANG00000025563	POLR1E	100	86.158	Papio_anubis
ENSCHIG00000019479	POLR1E	98	48.804	ENSPKIG00000003562	polr1e	99	48.804	Paramormyrops_kingsleyae
ENSCHIG00000019479	POLR1E	94	63.291	ENSPSIG00000003274	POLR1E	92	63.291	Pelodiscus_sinensis
ENSCHIG00000019479	POLR1E	94	46.402	ENSPMGG00000024169	polr1e	96	46.500	Periophthalmus_magnuspinnatus
ENSCHIG00000019479	POLR1E	100	64.048	ENSPEMG00000022300	-	96	64.048	Peromyscus_maniculatus_bairdii
ENSCHIG00000019479	POLR1E	100	79.714	ENSPEMG00000019151	-	97	79.714	Peromyscus_maniculatus_bairdii
ENSCHIG00000019479	POLR1E	95	74.242	ENSPCIG00000014798	POLR1E	97	74.242	Phascolarctos_cinereus
ENSCHIG00000019479	POLR1E	97	44.676	ENSPFOG00000019627	polr1e	97	44.676	Poecilia_formosa
ENSCHIG00000019479	POLR1E	98	46.135	ENSPLAG00000022679	polr1e	99	46.135	Poecilia_latipinna
ENSCHIG00000019479	POLR1E	85	46.944	ENSPMEG00000022123	polr1e	93	46.944	Poecilia_mexicana
ENSCHIG00000019479	POLR1E	97	45.833	ENSPREG00000009470	polr1e	98	45.833	Poecilia_reticulata
ENSCHIG00000019479	POLR1E	100	85.442	ENSPPYG00000019061	POLR1E	100	85.442	Pongo_abelii
ENSCHIG00000019479	POLR1E	73	70.395	ENSPCAG00000004891	POLR1E	100	70.395	Procavia_capensis
ENSCHIG00000019479	POLR1E	100	88.305	ENSPCOG00000027448	POLR1E	100	88.305	Propithecus_coquereli
ENSCHIG00000019479	POLR1E	95	90.152	ENSPVAG00000007940	POLR1E	83	90.152	Pteropus_vampyrus
ENSCHIG00000019479	POLR1E	98	45.169	ENSPNYG00000001032	polr1e	98	45.169	Pundamilia_nyererei
ENSCHIG00000019479	POLR1E	97	43.066	ENSPNAG00000006987	polr1e	99	43.066	Pygocentrus_nattereri
ENSCHIG00000019479	POLR1E	99	79.808	ENSRNOG00000012664	Polr1e	96	79.808	Rattus_norvegicus
ENSCHIG00000019479	POLR1E	99	83.373	ENSRBIG00000034214	POLR1E	100	86.614	Rhinopithecus_bieti
ENSCHIG00000019479	POLR1E	100	85.680	ENSRROG00000031986	POLR1E	100	85.680	Rhinopithecus_roxellana
ENSCHIG00000019479	POLR1E	100	85.442	ENSSBOG00000021415	POLR1E	100	85.442	Saimiri_boliviensis_boliviensis
ENSCHIG00000019479	POLR1E	85	72.423	ENSSHAG00000016084	POLR1E	99	72.423	Sarcophilus_harrisii
ENSCHIG00000019479	POLR1E	97	47.805	ENSSFOG00015002293	polr1e	98	47.805	Scleropages_formosus
ENSCHIG00000019479	POLR1E	99	47.045	ENSSMAG00000011672	polr1e	94	47.045	Scophthalmus_maximus
ENSCHIG00000019479	POLR1E	97	47.549	ENSSDUG00000022279	polr1e	97	47.549	Seriola_dumerili
ENSCHIG00000019479	POLR1E	97	47.059	ENSSLDG00000024918	polr1e	97	47.059	Seriola_lalandi_dorsalis
ENSCHIG00000019479	POLR1E	64	71.552	ENSSARG00000009810	-	67	71.552	Sorex_araneus
ENSCHIG00000019479	POLR1E	98	65.291	ENSSPUG00000009499	POLR1E	99	65.291	Sphenodon_punctatus
ENSCHIG00000019479	POLR1E	98	46.860	ENSSPAG00000021240	polr1e	99	46.860	Stegastes_partitus
ENSCHIG00000019479	POLR1E	100	89.737	ENSSSCG00000005347	POLR1E	100	89.737	Sus_scrofa
ENSCHIG00000019479	POLR1E	94	52.262	ENSTGUG00000007169	POLR1E	99	52.262	Taeniopygia_guttata
ENSCHIG00000019479	POLR1E	98	43.750	ENSTRUG00000020779	polr1e	99	44.619	Takifugu_rubripes
ENSCHIG00000019479	POLR1E	97	45.477	ENSTNIG00000017812	polr1e	98	45.477	Tetraodon_nigroviridis
ENSCHIG00000019479	POLR1E	94	88.325	ENSTBEG00000013786	POLR1E	84	88.325	Tupaia_belangeri
ENSCHIG00000019479	POLR1E	95	90.476	ENSTTRG00000008294	POLR1E	85	90.476	Tursiops_truncatus
ENSCHIG00000019479	POLR1E	100	87.828	ENSUAMG00000012474	POLR1E	100	89.373	Ursus_americanus
ENSCHIG00000019479	POLR1E	100	87.828	ENSUMAG00000011496	POLR1E	100	87.828	Ursus_maritimus
ENSCHIG00000019479	POLR1E	82	85.131	ENSVPAG00000009048	POLR1E	81	85.131	Vicugna_pacos
ENSCHIG00000019479	POLR1E	100	87.112	ENSVVUG00000019954	POLR1E	100	87.112	Vulpes_vulpes
ENSCHIG00000019479	POLR1E	98	51.932	ENSXETG00000006533	polr1e	99	51.932	Xenopus_tropicalis
ENSCHIG00000019479	POLR1E	97	45.343	ENSXCOG00000013706	polr1e	98	45.343	Xiphophorus_couchianus
ENSCHIG00000019479	POLR1E	97	46.814	ENSXMAG00000012484	polr1e	98	46.814	Xiphophorus_maculatus