EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000019626 (Gene tree)
Gene ID: 102187157
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 68011 bases
Position: chr18:44546414-44614424
Accession: 102187157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000021277	DUF1604	PF07713.13	6.1e-36	1	1
ENSCHIP00000021236	DUF1604	PF07713.13	1e-35	1	1
ENSCHIP00000021248	DUF1604	PF07713.13	1.1e-35	1	1
ENSCHIP00000021236	G-patch	PF01585.23	2.5e-07	1	1
ENSCHIP00000021248	G-patch	PF01585.23	2.5e-07	1	1
ENSCHIP00000021277	G-patch	PF01585.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000029121	GPATCH1-203	2706	-	ENSCHIP00000021277	901 (aa)	-	UPI000D18CE14
ENSCHIT00000029079	GPATCH1-201	3646	-	ENSCHIP00000021236	927 (aa)	-	UPI000D194E3E
ENSCHIT00000029091	GPATCH1-202	3658	XM_005692246	ENSCHIP00000021248	931 (aa)	XP_005692303	UPI0008463CF7

Gene Model

Click here to download ENSCHIG00000019626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019626	GPATCH1	100	88.841	ENSG00000076650	GPATCH1	99	88.841	Homo_sapiens
ENSCHIG00000019626	GPATCH1	100	87.339	ENSAMEG00000015575	GPATCH1	99	91.116	Ailuropoda_melanoleuca
ENSCHIG00000019626	GPATCH1	83	70.718	ENSAOCG00000006668	gpatch1	75	70.718	Amphiprion_ocellaris
ENSCHIG00000019626	GPATCH1	83	55.397	ENSAPEG00000000026	gpatch1	90	52.480	Amphiprion_percula
ENSCHIG00000019626	GPATCH1	92	50.971	ENSATEG00000014494	gpatch1	90	51.712	Anabas_testudineus
ENSCHIG00000019626	GPATCH1	91	62.612	ENSAPLG00000007584	GPATCH1	96	62.414	Anas_platyrhynchos
ENSCHIG00000019626	GPATCH1	100	88.090	ENSANAG00000027002	GPATCH1	99	88.082	Aotus_nancymaae
ENSCHIG00000019626	GPATCH1	83	55.102	ENSACLG00000024740	gpatch1	79	55.230	Astatotilapia_calliptera
ENSCHIG00000019626	GPATCH1	92	53.245	ENSAMXG00000020177	gpatch1	97	52.511	Astyanax_mexicanus
ENSCHIG00000019626	GPATCH1	100	97.100	ENSBTAG00000000721	GPATCH1	100	97.100	Bos_taurus
ENSCHIG00000019626	GPATCH1	100	87.983	ENSCJAG00000000684	GPATCH1	99	87.974	Callithrix_jacchus
ENSCHIG00000019626	GPATCH1	100	87.138	ENSCAFG00000007457	GPATCH1	83	90.693	Canis_familiaris
ENSCHIG00000019626	GPATCH1	94	91.304	ENSCAFG00020019731	GPATCH1	91	91.412	Canis_lupus_dingo
ENSCHIG00000019626	GPATCH1	97	79.185	ENSCAPG00000008827	GPATCH1	99	79.911	Cavia_aperea
ENSCHIG00000019626	GPATCH1	100	82.032	ENSCPOG00000024477	GPATCH1	99	82.829	Cavia_porcellus
ENSCHIG00000019626	GPATCH1	100	87.661	ENSCCAG00000024676	GPATCH1	99	87.649	Cebus_capucinus
ENSCHIG00000019626	GPATCH1	100	88.734	ENSCATG00000043637	GPATCH1	99	88.732	Cercocebus_atys
ENSCHIG00000019626	GPATCH1	96	83.427	ENSCLAG00000003395	-	100	84.323	Chinchilla_lanigera
ENSCHIG00000019626	GPATCH1	100	86.281	ENSCSAG00000004743	GPATCH1	99	86.364	Chlorocebus_sabaeus
ENSCHIG00000019626	GPATCH1	84	79.507	ENSCHOG00000012865	GPATCH1	89	80.156	Choloepus_hoffmanni
ENSCHIG00000019626	GPATCH1	80	70.110	ENSCPBG00000000666	GPATCH1	92	70.178	Chrysemys_picta_bellii
ENSCHIG00000019626	GPATCH1	83	35.602	ENSCING00000012518	-	84	35.668	Ciona_intestinalis
ENSCHIG00000019626	GPATCH1	90	84.938	ENSCANG00000012540	GPATCH1	99	84.848	Colobus_angolensis_palliatus
ENSCHIG00000019626	GPATCH1	97	81.668	ENSCGRG00001016736	Gpatch1	99	82.483	Cricetulus_griseus_chok1gshd
ENSCHIG00000019626	GPATCH1	90	68.765	ENSCGRG00000005069	Gpatch1	90	68.483	Cricetulus_griseus_crigri
ENSCHIG00000019626	GPATCH1	83	49.378	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSCHIG00000019626	GPATCH1	83	54.511	ENSDARG00000033418	gpatch1	81	54.693	Danio_rerio
ENSCHIG00000019626	GPATCH1	92	86.706	ENSDNOG00000005291	GPATCH1	95	86.706	Dasypus_novemcinctus
ENSCHIG00000019626	GPATCH1	94	79.267	ENSDORG00000012546	Gpatch1	95	79.529	Dipodomys_ordii
ENSCHIG00000019626	GPATCH1	72	33.619	FBgn0036386	CG8833	67	33.906	Drosophila_melanogaster
ENSCHIG00000019626	GPATCH1	99	76.898	ENSETEG00000003626	GPATCH1	92	77.647	Echinops_telfairi
ENSCHIG00000019626	GPATCH1	94	37.961	ENSEBUG00000011286	gpatch1	91	38.365	Eptatretus_burgeri
ENSCHIG00000019626	GPATCH1	100	86.534	ENSEASG00005021162	GPATCH1	100	86.424	Equus_asinus_asinus
ENSCHIG00000019626	GPATCH1	94	90.493	ENSECAG00000022743	GPATCH1	88	90.577	Equus_caballus
ENSCHIG00000019626	GPATCH1	79	78.922	ENSEEUG00000012925	GPATCH1	78	78.922	Erinaceus_europaeus
ENSCHIG00000019626	GPATCH1	99	48.813	ENSELUG00000018195	gpatch1	90	52.074	Esox_lucius
ENSCHIG00000019626	GPATCH1	100	89.807	ENSFCAG00000014917	GPATCH1	99	90.574	Felis_catus
ENSCHIG00000019626	GPATCH1	99	63.474	ENSFALG00000007821	GPATCH1	89	64.505	Ficedula_albicollis
ENSCHIG00000019626	GPATCH1	97	82.628	ENSFDAG00000003871	GPATCH1	100	82.405	Fukomys_damarensis
ENSCHIG00000019626	GPATCH1	77	52.256	ENSGMOG00000003830	gpatch1	98	52.204	Gadus_morhua
ENSCHIG00000019626	GPATCH1	92	65.371	ENSGALG00000004839	GPATCH1	93	64.664	Gallus_gallus
ENSCHIG00000019626	GPATCH1	83	52.399	ENSGACG00000017544	gpatch1	94	50.000	Gasterosteus_aculeatus
ENSCHIG00000019626	GPATCH1	100	65.751	ENSGAGG00000010067	GPATCH1	91	65.962	Gopherus_agassizii
ENSCHIG00000019626	GPATCH1	98	88.100	ENSGGOG00000010862	GPATCH1	99	88.753	Gorilla_gorilla
ENSCHIG00000019626	GPATCH1	83	55.314	ENSHBUG00000023462	gpatch1	90	52.680	Haplochromis_burtoni
ENSCHIG00000019626	GPATCH1	100	83.833	ENSHGLG00000009334	GPATCH1	99	84.256	Heterocephalus_glaber_female
ENSCHIG00000019626	GPATCH1	100	83.940	ENSHGLG00100018074	GPATCH1	99	84.365	Heterocephalus_glaber_male
ENSCHIG00000019626	GPATCH1	94	52.056	ENSIPUG00000014977	gpatch1	90	53.425	Ictalurus_punctatus
ENSCHIG00000019626	GPATCH1	100	82.851	ENSSTOG00000003720	GPATCH1	99	86.580	Ictidomys_tridecemlineatus
ENSCHIG00000019626	GPATCH1	92	84.806	ENSJJAG00000023765	Gpatch1	99	84.490	Jaculus_jaculus
ENSCHIG00000019626	GPATCH1	99	49.789	ENSKMAG00000017950	gpatch1	89	52.674	Kryptolebias_marmoratus
ENSCHIG00000019626	GPATCH1	83	53.416	ENSLBEG00000026527	gpatch1	79	54.783	Labrus_bergylta
ENSCHIG00000019626	GPATCH1	89	60.049	ENSLACG00000008130	GPATCH1	90	58.922	Latimeria_chalumnae
ENSCHIG00000019626	GPATCH1	83	57.778	ENSLOCG00000001800	gpatch1	90	53.555	Lepisosteus_oculatus
ENSCHIG00000019626	GPATCH1	99	88.901	ENSLAFG00000013589	GPATCH1	99	88.407	Loxodonta_africana
ENSCHIG00000019626	GPATCH1	94	87.427	ENSMFAG00000034418	GPATCH1	96	88.666	Macaca_fascicularis
ENSCHIG00000019626	GPATCH1	100	88.532	ENSMMUG00000011790	GPATCH1	100	88.242	Macaca_mulatta
ENSCHIG00000019626	GPATCH1	100	88.305	ENSMNEG00000045084	GPATCH1	99	88.299	Macaca_nemestrina
ENSCHIG00000019626	GPATCH1	100	77.790	ENSMLEG00000043840	GPATCH1	99	77.681	Mandrillus_leucophaeus
ENSCHIG00000019626	GPATCH1	83	54.974	ENSMZEG00005001926	gpatch1	80	55.102	Maylandia_zebra
ENSCHIG00000019626	GPATCH1	91	65.389	ENSMGAG00000005775	GPATCH1	89	65.072	Meleagris_gallopavo
ENSCHIG00000019626	GPATCH1	100	75.546	ENSMICG00000004829	GPATCH1	93	79.835	Microcebus_murinus
ENSCHIG00000019626	GPATCH1	99	81.055	ENSMOCG00000000174	Gpatch1	92	82.553	Microtus_ochrogaster
ENSCHIG00000019626	GPATCH1	83	51.198	ENSMMOG00000002140	gpatch1	87	52.652	Mola_mola
ENSCHIG00000019626	GPATCH1	92	74.496	ENSMODG00000012226	GPATCH1	90	75.176	Monodelphis_domestica
ENSCHIG00000019626	GPATCH1	83	53.189	ENSMALG00000014386	gpatch1	90	51.030	Monopterus_albus
ENSCHIG00000019626	GPATCH1	100	81.116	ENSMUSG00000063808	Gpatch1	100	95.918	Mus_musculus
ENSCHIG00000019626	GPATCH1	100	82.548	MGP_PahariEiJ_G0012816	Gpatch1	100	96.939	Mus_pahari
ENSCHIG00000019626	GPATCH1	100	82.422	MGP_SPRETEiJ_G0030681	Gpatch1	100	96.939	Mus_spretus
ENSCHIG00000019626	GPATCH1	100	90.236	ENSMPUG00000007658	GPATCH1	99	90.358	Mustela_putorius_furo
ENSCHIG00000019626	GPATCH1	100	89.581	ENSMLUG00000012161	GPATCH1	99	89.332	Myotis_lucifugus
ENSCHIG00000019626	GPATCH1	100	83.566	ENSNGAG00000012455	Gpatch1	99	83.731	Nannospalax_galili
ENSCHIG00000019626	GPATCH1	100	88.519	ENSNLEG00000007659	GPATCH1	99	88.516	Nomascus_leucogenys
ENSCHIG00000019626	GPATCH1	80	68.232	ENSMEUG00000015174	GPATCH1	79	67.711	Notamacropus_eugenii
ENSCHIG00000019626	GPATCH1	99	81.458	ENSODEG00000007103	GPATCH1	99	82.062	Octodon_degus
ENSCHIG00000019626	GPATCH1	83	56.170	ENSONIG00000003302	gpatch1	91	54.759	Oreochromis_niloticus
ENSCHIG00000019626	GPATCH1	99	71.676	ENSOANG00000012732	GPATCH1	91	74.941	Ornithorhynchus_anatinus
ENSCHIG00000019626	GPATCH1	100	83.798	ENSOCUG00000015905	GPATCH1	99	87.324	Oryctolagus_cuniculus
ENSCHIG00000019626	GPATCH1	92	51.364	ENSORLG00000018706	gpatch1	88	51.039	Oryzias_latipes
ENSCHIG00000019626	GPATCH1	92	49.766	ENSOMEG00000022688	gpatch1	90	50.461	Oryzias_melastigma
ENSCHIG00000019626	GPATCH1	87	88.369	ENSOGAG00000004016	GPATCH1	96	89.592	Otolemur_garnettii
ENSCHIG00000019626	GPATCH1	99	98.593	ENSOARG00000004365	GPATCH1	99	98.593	Ovis_aries
ENSCHIG00000019626	GPATCH1	100	88.519	ENSPPAG00000020990	GPATCH1	99	88.516	Pan_paniscus
ENSCHIG00000019626	GPATCH1	100	90.880	ENSPPRG00000017245	GPATCH1	99	90.791	Panthera_pardus
ENSCHIG00000019626	GPATCH1	100	87.446	ENSPTIG00000019649	GPATCH1	99	91.658	Panthera_tigris_altaica
ENSCHIG00000019626	GPATCH1	100	88.627	ENSPTRG00000010803	GPATCH1	99	88.624	Pan_troglodytes
ENSCHIG00000019626	GPATCH1	92	88.824	ENSPANG00000012374	GPATCH1	95	88.824	Papio_anubis
ENSCHIG00000019626	GPATCH1	83	57.344	ENSPKIG00000020745	gpatch1	77	57.599	Paramormyrops_kingsleyae
ENSCHIG00000019626	GPATCH1	100	61.849	ENSPSIG00000013433	GPATCH1	91	65.497	Pelodiscus_sinensis
ENSCHIG00000019626	GPATCH1	100	82.922	ENSPEMG00000000636	Gpatch1	99	82.755	Peromyscus_maniculatus_bairdii
ENSCHIG00000019626	GPATCH1	92	74.584	ENSPCIG00000021003	GPATCH1	95	75.354	Phascolarctos_cinereus
ENSCHIG00000019626	GPATCH1	75	49.209	ENSPREG00000008264	gpatch1	97	44.561	Poecilia_reticulata
ENSCHIG00000019626	GPATCH1	100	85.837	ENSPPYG00000009824	GPATCH1	99	85.807	Pongo_abelii
ENSCHIG00000019626	GPATCH1	83	80.952	ENSPCAG00000005931	GPATCH1	91	81.466	Procavia_capensis
ENSCHIG00000019626	GPATCH1	93	83.749	ENSPCOG00000009674	GPATCH1	97	82.409	Propithecus_coquereli
ENSCHIG00000019626	GPATCH1	84	88.828	ENSPVAG00000017767	GPATCH1	91	88.251	Pteropus_vampyrus
ENSCHIG00000019626	GPATCH1	83	55.270	ENSPNYG00000018189	gpatch1	89	55.270	Pundamilia_nyererei
ENSCHIG00000019626	GPATCH1	92	53.452	ENSPNAG00000013187	gpatch1	91	52.355	Pygocentrus_nattereri
ENSCHIG00000019626	GPATCH1	100	80.472	ENSRNOG00000011584	Gpatch1	99	83.424	Rattus_norvegicus
ENSCHIG00000019626	GPATCH1	100	81.136	ENSRBIG00000034723	GPATCH1	99	80.022	Rhinopithecus_bieti
ENSCHIG00000019626	GPATCH1	100	88.734	ENSRROG00000024428	GPATCH1	99	88.732	Rhinopithecus_roxellana
ENSCHIG00000019626	GPATCH1	100	83.798	ENSSBOG00000034650	GPATCH1	99	88.082	Saimiri_boliviensis_boliviensis
ENSCHIG00000019626	GPATCH1	99	74.142	ENSSHAG00000016016	GPATCH1	90	75.618	Sarcophilus_harrisii
ENSCHIG00000019626	GPATCH1	83	55.727	ENSSFOG00015011535	gpatch1	94	51.623	Scleropages_formosus
ENSCHIG00000019626	GPATCH1	83	50.432	ENSSMAG00000002883	gpatch1	93	47.970	Scophthalmus_maximus
ENSCHIG00000019626	GPATCH1	83	52.809	ENSSDUG00000007444	gpatch1	80	54.353	Seriola_dumerili
ENSCHIG00000019626	GPATCH1	83	53.425	ENSSLDG00000002856	gpatch1	89	54.286	Seriola_lalandi_dorsalis
ENSCHIG00000019626	GPATCH1	75	85.608	ENSSARG00000004108	GPATCH1	72	85.608	Sorex_araneus
ENSCHIG00000019626	GPATCH1	92	92.824	ENSSSCG00000002865	GPATCH1	94	92.824	Sus_scrofa
ENSCHIG00000019626	GPATCH1	99	65.335	ENSTGUG00000009401	GPATCH1	91	65.202	Taeniopygia_guttata
ENSCHIG00000019626	GPATCH1	83	51.779	ENSTRUG00000025081	gpatch1	90	50.238	Takifugu_rubripes
ENSCHIG00000019626	GPATCH1	83	51.779	ENSTRUG00000005785	-	90	50.238	Takifugu_rubripes
ENSCHIG00000019626	GPATCH1	83	53.186	ENSTNIG00000002554	gpatch1	97	53.956	Tetraodon_nigroviridis
ENSCHIG00000019626	GPATCH1	65	77.094	ENSTBEG00000007750	-	84	76.513	Tupaia_belangeri
ENSCHIG00000019626	GPATCH1	92	84.174	ENSTTRG00000012221	GPATCH1	99	84.341	Tursiops_truncatus
ENSCHIG00000019626	GPATCH1	100	85.529	ENSUMAG00000014645	GPATCH1	99	89.867	Ursus_maritimus
ENSCHIG00000019626	GPATCH1	80	97.143	ENSVPAG00000010313	GPATCH1	86	97.283	Vicugna_pacos
ENSCHIG00000019626	GPATCH1	94	91.419	ENSVVUG00000016572	GPATCH1	91	91.529	Vulpes_vulpes
ENSCHIG00000019626	GPATCH1	99	50.943	ENSXETG00000018276	gpatch1	94	53.604	Xenopus_tropicalis