EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000019719 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH domain-containing protein 6
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 15307 bases
Position: chrLWLT01000118.1:97080-112386
Accession: 102169298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000021387	zf-CCCH	PF00642.24	2.1e-09	1	1
ENSCHIP00000021387	zf-CCCH_2	PF14608.6	1.8e-05	1	3
ENSCHIP00000021387	zf-CCCH_2	PF14608.6	1.8e-05	2	3
ENSCHIP00000021387	zf-CCCH_2	PF14608.6	1.8e-05	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000029231	-	2877	XM_018045133	ENSCHIP00000021387	958 (aa)	XP_017900622	UPI000D18FED2

Gene Model

Click here to download ENSCHIG00000019719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019719's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019719	-	96	81.474	ENSG00000188177	ZC3H6	80	81.474	Homo_sapiens
ENSCHIG00000019719	-	96	82.040	ENSAMEG00000016194	ZC3H6	80	82.040	Ailuropoda_melanoleuca
ENSCHIG00000019719	-	54	39.177	ENSACIG00000021843	zc3h6	82	40.439	Amphilophus_citrinellus
ENSCHIG00000019719	-	95	41.255	ENSATEG00000019063	zc3h6	76	41.057	Anabas_testudineus
ENSCHIG00000019719	-	95	61.571	ENSAPLG00000014287	ZC3H6	80	62.094	Anas_platyrhynchos
ENSCHIG00000019719	-	96	81.857	ENSANAG00000024229	ZC3H6	80	81.857	Aotus_nancymaae
ENSCHIG00000019719	-	96	81.579	ENSCJAG00000016479	ZC3H6	80	81.579	Callithrix_jacchus
ENSCHIG00000019719	-	97	82.049	ENSCAFG00000007160	ZC3H6	80	82.049	Canis_familiaris
ENSCHIG00000019719	-	97	82.641	ENSCAFG00020017525	ZC3H6	80	82.641	Canis_lupus_dingo
ENSCHIG00000019719	-	96	81.943	ENSTSYG00000031857	ZC3H6	80	82.154	Carlito_syrichta
ENSCHIG00000019719	-	95	75.806	ENSCPOG00000003445	ZC3H6	80	75.806	Cavia_porcellus
ENSCHIG00000019719	-	96	82.489	ENSCATG00000036595	ZC3H6	89	82.211	Cercocebus_atys
ENSCHIG00000019719	-	95	77.077	ENSCLAG00000006605	ZC3H6	88	79.171	Chinchilla_lanigera
ENSCHIG00000019719	-	96	82.000	ENSCSAG00000016793	ZC3H6	89	82.000	Chlorocebus_sabaeus
ENSCHIG00000019719	-	96	81.684	ENSCANG00000041036	ZC3H6	81	81.684	Colobus_angolensis_palliatus
ENSCHIG00000019719	-	95	73.825	ENSCGRG00001022022	Zc3h6	81	73.228	Cricetulus_griseus_chok1gshd
ENSCHIG00000019719	-	96	72.842	ENSCGRG00000016162	Zc3h6	81	72.842	Cricetulus_griseus_crigri
ENSCHIG00000019719	-	80	56.471	ENSCSEG00000012267	zc3h6	80	56.126	Cynoglossus_semilaevis
ENSCHIG00000019719	-	95	73.147	ENSDNOG00000044811	ZC3H6	80	73.792	Dasypus_novemcinctus
ENSCHIG00000019719	-	95	76.408	ENSDORG00000013967	Zc3h6	80	76.408	Dipodomys_ordii
ENSCHIG00000019719	-	95	84.632	ENSEASG00005006493	ZC3H6	96	83.932	Equus_asinus_asinus
ENSCHIG00000019719	-	95	84.739	ENSECAG00000023620	ZC3H6	80	84.038	Equus_caballus
ENSCHIG00000019719	-	75	76.142	ENSEEUG00000013883	-	63	76.142	Erinaceus_europaeus
ENSCHIG00000019719	-	95	83.691	ENSFCAG00000008089	ZC3H6	80	82.997	Felis_catus
ENSCHIG00000019719	-	95	61.870	ENSFALG00000011589	ZC3H6	80	62.080	Ficedula_albicollis
ENSCHIG00000019719	-	95	78.959	ENSFDAG00000002521	ZC3H6	81	77.211	Fukomys_damarensis
ENSCHIG00000019719	-	95	61.619	ENSGALG00000008269	ZC3H6	78	62.145	Gallus_gallus
ENSCHIG00000019719	-	75	58.716	ENSGAFG00000006771	zc3h6	74	58.716	Gambusia_affinis
ENSCHIG00000019719	-	75	59.155	ENSGACG00000005343	zc3h6	77	40.314	Gasterosteus_aculeatus
ENSCHIG00000019719	-	95	63.828	ENSGAGG00000010857	ZC3H6	81	63.828	Gopherus_agassizii
ENSCHIG00000019719	-	96	81.962	ENSGGOG00000001665	ZC3H6	80	81.962	Gorilla_gorilla
ENSCHIG00000019719	-	95	78.533	ENSHGLG00000011882	ZC3H6	78	77.211	Heterocephalus_glaber_female
ENSCHIG00000019719	-	95	78.280	ENSHGLG00100002559	ZC3H6	82	76.947	Heterocephalus_glaber_male
ENSCHIG00000019719	-	76	63.184	ENSHCOG00000012519	zc3h6	65	63.184	Hippocampus_comes
ENSCHIG00000019719	-	95	78.108	ENSSTOG00000008120	-	89	77.474	Ictidomys_tridecemlineatus
ENSCHIG00000019719	-	95	76.727	ENSJJAG00000013206	Zc3h6	80	76.105	Jaculus_jaculus
ENSCHIG00000019719	-	95	40.410	ENSKMAG00000016252	zc3h6	64	60.287	Kryptolebias_marmoratus
ENSCHIG00000019719	-	70	64.583	ENSLBEG00000003054	zc3h6	67	64.583	Labrus_bergylta
ENSCHIG00000019719	-	95	48.594	ENSLACG00000012014	ZC3H6	80	49.293	Latimeria_chalumnae
ENSCHIG00000019719	-	95	46.019	ENSLOCG00000016548	zc3h6	78	45.915	Lepisosteus_oculatus
ENSCHIG00000019719	-	95	76.645	ENSLAFG00000001151	ZC3H6	86	76.327	Loxodonta_africana
ENSCHIG00000019719	-	96	82.278	ENSMFAG00000036963	ZC3H6	80	82.278	Macaca_fascicularis
ENSCHIG00000019719	-	96	82.278	ENSMMUG00000016430	ZC3H6	80	82.278	Macaca_mulatta
ENSCHIG00000019719	-	96	82.068	ENSMNEG00000031225	ZC3H6	89	81.789	Macaca_nemestrina
ENSCHIG00000019719	-	96	82.489	ENSMLEG00000038821	ZC3H6	80	82.489	Mandrillus_leucophaeus
ENSCHIG00000019719	-	95	62.145	ENSMGAG00000003025	ZC3H6	80	62.461	Meleagris_gallopavo
ENSCHIG00000019719	-	95	73.007	ENSMAUG00000017009	Zc3h6	80	72.421	Mesocricetus_auratus
ENSCHIG00000019719	-	96	81.981	ENSMICG00000036353	ZC3H6	80	81.981	Microcebus_murinus
ENSCHIG00000019719	-	97	70.890	ENSMOCG00000002054	Zc3h6	81	71.204	Microtus_ochrogaster
ENSCHIG00000019719	-	96	66.528	ENSMODG00000006612	ZC3H6	81	66.840	Monodelphis_domestica
ENSCHIG00000019719	-	80	55.056	ENSMALG00000002048	zc3h6	72	64.467	Monopterus_albus
ENSCHIG00000019719	-	95	69.904	MGP_CAROLIEiJ_G0024278	Zc3h6	80	69.345	Mus_caroli
ENSCHIG00000019719	-	95	70.651	ENSMUSG00000042851	Zc3h6	80	70.085	Mus_musculus
ENSCHIG00000019719	-	97	69.948	MGP_PahariEiJ_G0025723	Zc3h6	81	69.948	Mus_pahari
ENSCHIG00000019719	-	95	70.864	MGP_SPRETEiJ_G0025198	Zc3h6	80	70.296	Mus_spretus
ENSCHIG00000019719	-	95	84.227	ENSMPUG00000009624	ZC3H6	89	83.528	Mustela_putorius_furo
ENSCHIG00000019719	-	97	75.105	ENSMLUG00000004896	ZC3H6	80	76.366	Myotis_lucifugus
ENSCHIG00000019719	-	95	75.983	ENSNGAG00000013596	Zc3h6	84	76.089	Nannospalax_galili
ENSCHIG00000019719	-	72	65.969	ENSNBRG00000015382	zc3h6	67	66.492	Neolamprologus_brichardi
ENSCHIG00000019719	-	96	81.751	ENSNLEG00000033657	ZC3H6	80	81.751	Nomascus_leucogenys
ENSCHIG00000019719	-	95	74.468	ENSOPRG00000012717	ZC3H6	79	74.468	Ochotona_princeps
ENSCHIG00000019719	-	95	76.408	ENSODEG00000009099	ZC3H6	83	77.471	Octodon_degus
ENSCHIG00000019719	-	73	64.615	ENSONIG00000009880	zc3h6	65	54.924	Oreochromis_niloticus
ENSCHIG00000019719	-	96	65.445	ENSOANG00000012054	-	82	65.596	Ornithorhynchus_anatinus
ENSCHIG00000019719	-	95	79.406	ENSOCUG00000011125	ZC3H6	88	79.406	Oryctolagus_cuniculus
ENSCHIG00000019719	-	95	39.794	ENSORLG00000011179	zc3h6	76	39.547	Oryzias_latipes
ENSCHIG00000019719	-	95	39.588	ENSORLG00020017202	zc3h6	76	39.650	Oryzias_latipes_hni
ENSCHIG00000019719	-	95	39.794	ENSORLG00015001664	zc3h6	76	39.713	Oryzias_latipes_hsok
ENSCHIG00000019719	-	95	38.985	ENSOMEG00000001296	zc3h6	71	66.146	Oryzias_melastigma
ENSCHIG00000019719	-	96	80.000	ENSOGAG00000002556	ZC3H6	80	80.000	Otolemur_garnettii
ENSCHIG00000019719	-	96	96.489	ENSOARG00000014503	ZC3H6	80	96.489	Ovis_aries
ENSCHIG00000019719	-	96	81.579	ENSPPAG00000030495	ZC3H6	81	81.579	Pan_paniscus
ENSCHIG00000019719	-	95	83.906	ENSPPRG00000005673	ZC3H6	80	83.209	Panthera_pardus
ENSCHIG00000019719	-	95	85.016	ENSPTIG00000015800	ZC3H6	80	84.301	Panthera_tigris_altaica
ENSCHIG00000019719	-	96	81.579	ENSPTRG00000012363	ZC3H6	80	81.579	Pan_troglodytes
ENSCHIG00000019719	-	96	82.278	ENSPANG00000025224	ZC3H6	80	82.278	Papio_anubis
ENSCHIG00000019719	-	75	66.492	ENSPKIG00000007353	zc3h6	79	63.874	Paramormyrops_kingsleyae
ENSCHIG00000019719	-	95	63.866	ENSPSIG00000002520	ZC3H6	81	63.866	Pelodiscus_sinensis
ENSCHIG00000019719	-	97	72.421	ENSPEMG00000000918	Zc3h6	82	72.947	Peromyscus_maniculatus_bairdii
ENSCHIG00000019719	-	96	67.672	ENSPCIG00000029741	ZC3H6	90	67.775	Phascolarctos_cinereus
ENSCHIG00000019719	-	73	64.062	ENSPFOG00000015748	zc3h6	64	64.062	Poecilia_formosa
ENSCHIG00000019719	-	73	64.062	ENSPLAG00000002469	zc3h6	64	64.062	Poecilia_latipinna
ENSCHIG00000019719	-	73	64.171	ENSPMEG00000020802	zc3h6	83	64.171	Poecilia_mexicana
ENSCHIG00000019719	-	75	62.439	ENSPREG00000023126	zc3h6	72	62.439	Poecilia_reticulata
ENSCHIG00000019719	-	75	73.067	ENSPCAG00000015468	ZC3H6	62	75.405	Procavia_capensis
ENSCHIG00000019719	-	96	81.158	ENSPCOG00000016627	ZC3H6	80	81.368	Propithecus_coquereli
ENSCHIG00000019719	-	69	68.935	ENSPVAG00000013728	ZC3H6	59	67.101	Pteropus_vampyrus
ENSCHIG00000019719	-	73	65.969	ENSPNYG00000018130	zc3h6	69	66.492	Pundamilia_nyererei
ENSCHIG00000019719	-	95	43.005	ENSPNAG00000009331	zc3h6	76	43.064	Pygocentrus_nattereri
ENSCHIG00000019719	-	96	71.474	ENSRNOG00000026277	Zc3h6	80	71.474	Rattus_norvegicus
ENSCHIG00000019719	-	96	81.962	ENSSBOG00000033489	ZC3H6	89	81.684	Saimiri_boliviensis_boliviensis
ENSCHIG00000019719	-	96	66.424	ENSSHAG00000016634	ZC3H6	97	66.736	Sarcophilus_harrisii
ENSCHIG00000019719	-	95	42.887	ENSSFOG00015004488	zc3h6	77	42.752	Scleropages_formosus
ENSCHIG00000019719	-	73	63.874	ENSSMAG00000008411	zc3h6	74	40.839	Scophthalmus_maximus
ENSCHIG00000019719	-	73	66.146	ENSSDUG00000006105	zc3h6	62	66.146	Seriola_dumerili
ENSCHIG00000019719	-	73	66.146	ENSSLDG00000021813	zc3h6	61	66.146	Seriola_lalandi_dorsalis
ENSCHIG00000019719	-	95	78.373	ENSSARG00000001035	ZC3H6	80	78.373	Sorex_araneus
ENSCHIG00000019719	-	73	55.469	ENSSPUG00000013031	-	66	45.701	Sphenodon_punctatus
ENSCHIG00000019719	-	96	83.544	ENSSSCG00000008096	ZC3H6	80	83.544	Sus_scrofa
ENSCHIG00000019719	-	95	62.171	ENSTGUG00000007468	ZC3H6	80	62.487	Taeniopygia_guttata
ENSCHIG00000019719	-	73	64.767	ENSTRUG00000012901	zc3h6	62	64.767	Takifugu_rubripes
ENSCHIG00000019719	-	95	41.419	ENSTNIG00000016608	zc3h6	74	63.776	Tetraodon_nigroviridis
ENSCHIG00000019719	-	86	87.611	ENSTBEG00000016232	ZC3H6	76	87.611	Tupaia_belangeri
ENSCHIG00000019719	-	74	82.227	ENSTTRG00000013154	ZC3H6	64	84.501	Tursiops_truncatus
ENSCHIG00000019719	-	95	83.047	ENSUAMG00000002401	ZC3H6	89	82.359	Ursus_americanus
ENSCHIG00000019719	-	95	82.833	ENSUMAG00000008663	ZC3H6	89	82.147	Ursus_maritimus
ENSCHIG00000019719	-	95	83.173	ENSVPAG00000005912	ZC3H6	80	83.173	Vicugna_pacos
ENSCHIG00000019719	-	95	82.940	ENSVVUG00000028662	ZC3H6	89	82.253	Vulpes_vulpes
ENSCHIG00000019719	-	76	62.252	ENSXETG00000013762	zc3h6	71	62.252	Xenopus_tropicalis
ENSCHIG00000019719	-	62	62.439	ENSXCOG00000011662	zc3h6	66	62.439	Xiphophorus_couchianus
ENSCHIG00000019719	-	73	64.062	ENSXMAG00000020822	zc3h6	63	64.062	Xiphophorus_maculatus