EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000019908 (Gene tree)
Gene ID: 102173782
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 6108 bases
Position: chr19:55244456-55250563
Accession: 102173782
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000021650	tRNA_int_end_N2	PF12928.7	7.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000029503	TSEN54-201	1554	XM_018063819	ENSCHIP00000021650	517 (aa)	XP_017919308	UPI000D194E34

Gene Model

Click here to download ENSCHIG00000019908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019908	TSEN54	100	81.559	ENSG00000182173	TSEN54	100	95.833	Homo_sapiens
ENSCHIG00000019908	TSEN54	97	45.681	ENSAPOG00000009659	tsen54	99	42.431	Acanthochromis_polyacanthus
ENSCHIG00000019908	TSEN54	99	82.075	ENSAMEG00000009414	TSEN54	99	82.642	Ailuropoda_melanoleuca
ENSCHIG00000019908	TSEN54	97	45.294	ENSAOCG00000000152	tsen54	95	45.211	Amphiprion_ocellaris
ENSCHIG00000019908	TSEN54	97	44.706	ENSAPEG00000018931	tsen54	94	44.636	Amphiprion_percula
ENSCHIG00000019908	TSEN54	97	43.822	ENSATEG00000019860	tsen54	97	43.243	Anabas_testudineus
ENSCHIG00000019908	TSEN54	86	53.728	ENSAPLG00000009419	TSEN54	100	53.728	Anas_platyrhynchos
ENSCHIG00000019908	TSEN54	97	53.592	ENSACAG00000006714	TSEN54	98	53.592	Anolis_carolinensis
ENSCHIG00000019908	TSEN54	99	82.659	ENSANAG00000024061	TSEN54	99	83.429	Aotus_nancymaae
ENSCHIG00000019908	TSEN54	97	44.574	ENSACLG00000019800	tsen54	96	44.722	Astatotilapia_calliptera
ENSCHIG00000019908	TSEN54	97	47.129	ENSAMXG00000006546	tsen54	96	47.129	Astyanax_mexicanus
ENSCHIG00000019908	TSEN54	100	95.265	ENSBTAG00000000824	TSEN54	100	95.265	Bos_taurus
ENSCHIG00000019908	TSEN54	99	81.888	ENSCJAG00000014278	TSEN54	99	82.667	Callithrix_jacchus
ENSCHIG00000019908	TSEN54	100	83.239	ENSCAFG00000004798	TSEN54	100	84.181	Canis_familiaris
ENSCHIG00000019908	TSEN54	100	83.239	ENSCAFG00020000312	TSEN54	100	84.181	Canis_lupus_dingo
ENSCHIG00000019908	TSEN54	86	79.780	ENSTSYG00000037439	TSEN54	100	80.440	Carlito_syrichta
ENSCHIG00000019908	TSEN54	99	83.237	ENSCCAG00000036624	TSEN54	99	82.857	Cebus_capucinus
ENSCHIG00000019908	TSEN54	97	83.594	ENSCATG00000042877	TSEN54	99	83.429	Cercocebus_atys
ENSCHIG00000019908	TSEN54	97	80.822	ENSCLAG00000002924	TSEN54	99	80.534	Chinchilla_lanigera
ENSCHIG00000019908	TSEN54	100	81.749	ENSCSAG00000004809	TSEN54	100	82.890	Chlorocebus_sabaeus
ENSCHIG00000019908	TSEN54	99	54.869	ENSCPBG00000028071	TSEN54	99	54.869	Chrysemys_picta_bellii
ENSCHIG00000019908	TSEN54	100	82.129	ENSCANG00000028053	TSEN54	100	82.129	Colobus_angolensis_palliatus
ENSCHIG00000019908	TSEN54	100	80.190	ENSCGRG00001020029	Tsen54	100	80.190	Cricetulus_griseus_chok1gshd
ENSCHIG00000019908	TSEN54	84	78.182	ENSCGRG00000016289	Tsen54	99	78.182	Cricetulus_griseus_crigri
ENSCHIG00000019908	TSEN54	80	37.844	ENSCSEG00000020586	tsen54	99	36.697	Cynoglossus_semilaevis
ENSCHIG00000019908	TSEN54	80	43.510	ENSDARG00000036844	tsen54	99	45.131	Danio_rerio
ENSCHIG00000019908	TSEN54	100	76.493	ENSDNOG00000018452	TSEN54	100	78.908	Dasypus_novemcinctus
ENSCHIG00000019908	TSEN54	100	81.143	ENSDORG00000004073	Tsen54	100	81.714	Dipodomys_ordii
ENSCHIG00000019908	TSEN54	97	36.075	ENSEBUG00000005203	TSEN54	95	36.243	Eptatretus_burgeri
ENSCHIG00000019908	TSEN54	100	84.906	ENSEASG00005000579	TSEN54	100	84.906	Equus_asinus_asinus
ENSCHIG00000019908	TSEN54	100	84.906	ENSECAG00000004924	TSEN54	100	84.906	Equus_caballus
ENSCHIG00000019908	TSEN54	86	77.243	ENSEEUG00000008467	TSEN54	100	78.337	Erinaceus_europaeus
ENSCHIG00000019908	TSEN54	97	44.821	ENSELUG00000017703	tsen54	90	43.691	Esox_lucius
ENSCHIG00000019908	TSEN54	99	83.333	ENSFCAG00000023712	TSEN54	99	83.902	Felis_catus
ENSCHIG00000019908	TSEN54	95	51.491	ENSFALG00000001119	TSEN54	95	51.992	Ficedula_albicollis
ENSCHIG00000019908	TSEN54	86	80.044	ENSFDAG00000019090	TSEN54	99	80.044	Fukomys_damarensis
ENSCHIG00000019908	TSEN54	97	45.720	ENSFHEG00000005470	tsen54	96	45.914	Fundulus_heteroclitus
ENSCHIG00000019908	TSEN54	79	47.027	ENSGMOG00000013146	tsen54	96	46.154	Gadus_morhua
ENSCHIG00000019908	TSEN54	95	50.595	ENSGALG00000047163	TSEN54	98	50.595	Gallus_gallus
ENSCHIG00000019908	TSEN54	99	47.692	ENSGAFG00000005111	tsen54	99	47.692	Gambusia_affinis
ENSCHIG00000019908	TSEN54	96	44.706	ENSGACG00000014987	tsen54	99	44.118	Gasterosteus_aculeatus
ENSCHIG00000019908	TSEN54	100	55.741	ENSGAGG00000006825	TSEN54	99	55.741	Gopherus_agassizii
ENSCHIG00000019908	TSEN54	97	81.693	ENSGGOG00000009417	TSEN54	100	82.874	Gorilla_gorilla
ENSCHIG00000019908	TSEN54	87	43.070	ENSHBUG00000018296	tsen54	99	37.412	Haplochromis_burtoni
ENSCHIG00000019908	TSEN54	100	83.048	ENSHGLG00000007979	TSEN54	100	83.048	Heterocephalus_glaber_female
ENSCHIG00000019908	TSEN54	100	82.095	ENSHGLG00100005497	TSEN54	100	82.095	Heterocephalus_glaber_male
ENSCHIG00000019908	TSEN54	80	41.801	ENSHCOG00000007481	tsen54	99	41.958	Hippocampus_comes
ENSCHIG00000019908	TSEN54	99	41.651	ENSIPUG00000000590	tsen54	79	60.588	Ictalurus_punctatus
ENSCHIG00000019908	TSEN54	100	77.905	ENSSTOG00000012883	TSEN54	100	77.905	Ictidomys_tridecemlineatus
ENSCHIG00000019908	TSEN54	100	80.266	ENSJJAG00000007365	Tsen54	100	80.266	Jaculus_jaculus
ENSCHIG00000019908	TSEN54	97	45.198	ENSKMAG00000006944	tsen54	97	44.821	Kryptolebias_marmoratus
ENSCHIG00000019908	TSEN54	97	44.902	ENSLBEG00000004199	tsen54	97	45.294	Labrus_bergylta
ENSCHIG00000019908	TSEN54	97	46.792	ENSLACG00000009497	TSEN54	100	46.604	Latimeria_chalumnae
ENSCHIG00000019908	TSEN54	99	47.263	ENSLOCG00000011191	tsen54	97	47.744	Lepisosteus_oculatus
ENSCHIG00000019908	TSEN54	100	76.836	ENSLAFG00000011655	TSEN54	100	77.024	Loxodonta_africana
ENSCHIG00000019908	TSEN54	100	81.939	ENSMFAG00000000712	TSEN54	100	83.080	Macaca_fascicularis
ENSCHIG00000019908	TSEN54	100	81.749	ENSMNEG00000029199	TSEN54	100	82.890	Macaca_nemestrina
ENSCHIG00000019908	TSEN54	86	80.973	ENSMLEG00000044168	TSEN54	88	82.301	Mandrillus_leucophaeus
ENSCHIG00000019908	TSEN54	98	43.750	ENSMAMG00000019773	tsen54	98	43.378	Mastacembelus_armatus
ENSCHIG00000019908	TSEN54	97	44.574	ENSMZEG00005000884	tsen54	96	44.722	Maylandia_zebra
ENSCHIG00000019908	TSEN54	99	50.189	ENSMGAG00000009556	TSEN54	99	50.189	Meleagris_gallopavo
ENSCHIG00000019908	TSEN54	100	80.190	ENSMAUG00000016838	Tsen54	100	80.190	Mesocricetus_auratus
ENSCHIG00000019908	TSEN54	100	80.455	ENSMICG00000044012	TSEN54	100	81.214	Microcebus_murinus
ENSCHIG00000019908	TSEN54	100	81.333	ENSMOCG00000021585	Tsen54	100	81.333	Microtus_ochrogaster
ENSCHIG00000019908	TSEN54	96	42.800	ENSMMOG00000020189	tsen54	98	43.400	Mola_mola
ENSCHIG00000019908	TSEN54	98	67.917	ENSMODG00000007438	TSEN54	98	67.468	Monodelphis_domestica
ENSCHIG00000019908	TSEN54	97	44.767	ENSMALG00000020573	tsen54	97	44.510	Monopterus_albus
ENSCHIG00000019908	TSEN54	100	79.238	MGP_CAROLIEiJ_G0017417	Tsen54	100	79.238	Mus_caroli
ENSCHIG00000019908	TSEN54	100	80.190	ENSMUSG00000020781	Tsen54	100	80.190	Mus_musculus
ENSCHIG00000019908	TSEN54	100	79.238	MGP_PahariEiJ_G0018547	Tsen54	100	79.238	Mus_pahari
ENSCHIG00000019908	TSEN54	100	80.381	MGP_SPRETEiJ_G0018262	Tsen54	100	80.381	Mus_spretus
ENSCHIG00000019908	TSEN54	100	81.544	ENSMPUG00000013870	TSEN54	100	82.109	Mustela_putorius_furo
ENSCHIG00000019908	TSEN54	100	79.284	ENSMLUG00000015298	TSEN54	100	79.849	Myotis_lucifugus
ENSCHIG00000019908	TSEN54	100	82.150	ENSNGAG00000015673	Tsen54	100	82.150	Nannospalax_galili
ENSCHIG00000019908	TSEN54	88	63.502	ENSMEUG00000011908	TSEN54	100	63.502	Notamacropus_eugenii
ENSCHIG00000019908	TSEN54	100	73.423	ENSOPRG00000012513	TSEN54	100	73.423	Ochotona_princeps
ENSCHIG00000019908	TSEN54	97	45.383	ENSONIG00000009543	tsen54	96	45.294	Oreochromis_niloticus
ENSCHIG00000019908	TSEN54	99	70.919	ENSOCUG00000009875	TSEN54	99	72.420	Oryctolagus_cuniculus
ENSCHIG00000019908	TSEN54	97	45.437	ENSORLG00000000852	tsen54	97	44.643	Oryzias_latipes
ENSCHIG00000019908	TSEN54	97	45.527	ENSORLG00020018221	tsen54	97	44.752	Oryzias_latipes_hni
ENSCHIG00000019908	TSEN54	97	44.930	ENSORLG00015009413	tsen54	98	43.676	Oryzias_latipes_hsok
ENSCHIG00000019908	TSEN54	97	45.219	ENSOMEG00000014402	tsen54	94	44.024	Oryzias_melastigma
ENSCHIG00000019908	TSEN54	100	76.236	ENSOGAG00000001442	TSEN54	100	76.236	Otolemur_garnettii
ENSCHIG00000019908	TSEN54	86	93.172	ENSOARG00000010361	TSEN54	100	93.833	Ovis_aries
ENSCHIG00000019908	TSEN54	94	81.653	ENSPPAG00000043519	TSEN54	100	81.653	Pan_paniscus
ENSCHIG00000019908	TSEN54	99	83.712	ENSPPRG00000009162	TSEN54	99	84.280	Panthera_pardus
ENSCHIG00000019908	TSEN54	86	82.927	ENSPTIG00000019312	TSEN54	96	84.035	Panthera_tigris_altaica
ENSCHIG00000019908	TSEN54	100	81.559	ENSPTRG00000009646	TSEN54	100	82.700	Pan_troglodytes
ENSCHIG00000019908	TSEN54	99	81.714	ENSPANG00000020133	TSEN54	99	83.174	Papio_anubis
ENSCHIG00000019908	TSEN54	97	46.168	ENSPKIG00000023018	tsen54	100	46.083	Paramormyrops_kingsleyae
ENSCHIG00000019908	TSEN54	80	51.732	ENSPSIG00000012807	TSEN54	99	51.732	Pelodiscus_sinensis
ENSCHIG00000019908	TSEN54	92	36.680	ENSPMGG00000019578	tsen54	99	35.306	Periophthalmus_magnuspinnatus
ENSCHIG00000019908	TSEN54	100	81.333	ENSPEMG00000014857	Tsen54	100	81.333	Peromyscus_maniculatus_bairdii
ENSCHIG00000019908	TSEN54	97	47.953	ENSPFOG00000022740	tsen54	96	47.953	Poecilia_formosa
ENSCHIG00000019908	TSEN54	97	47.843	ENSPLAG00000014847	tsen54	96	47.843	Poecilia_latipinna
ENSCHIG00000019908	TSEN54	97	47.647	ENSPMEG00000022876	tsen54	96	47.647	Poecilia_mexicana
ENSCHIG00000019908	TSEN54	99	47.674	ENSPREG00000013090	tsen54	98	46.743	Poecilia_reticulata
ENSCHIG00000019908	TSEN54	91	76.101	ENSPPYG00000008629	TSEN54	100	76.987	Pongo_abelii
ENSCHIG00000019908	TSEN54	95	70.949	ENSPCAG00000002093	TSEN54	99	70.949	Procavia_capensis
ENSCHIG00000019908	TSEN54	100	83.460	ENSPCOG00000027880	TSEN54	100	84.221	Propithecus_coquereli
ENSCHIG00000019908	TSEN54	100	84.746	ENSPVAG00000008446	TSEN54	100	84.746	Pteropus_vampyrus
ENSCHIG00000019908	TSEN54	92	43.651	ENSPNYG00000010217	tsen54	99	43.651	Pundamilia_nyererei
ENSCHIG00000019908	TSEN54	99	45.247	ENSPNAG00000003770	tsen54	99	44.717	Pygocentrus_nattereri
ENSCHIG00000019908	TSEN54	100	80.000	ENSRNOG00000004598	Tsen54	100	80.000	Rattus_norvegicus
ENSCHIG00000019908	TSEN54	100	82.700	ENSRBIG00000043040	TSEN54	100	82.700	Rhinopithecus_bieti
ENSCHIG00000019908	TSEN54	100	82.510	ENSRROG00000030797	TSEN54	100	82.510	Rhinopithecus_roxellana
ENSCHIG00000019908	TSEN54	99	78.476	ENSSBOG00000013543	TSEN54	99	79.619	Saimiri_boliviensis_boliviensis
ENSCHIG00000019908	TSEN54	99	66.853	ENSSHAG00000018127	TSEN54	98	66.853	Sarcophilus_harrisii
ENSCHIG00000019908	TSEN54	81	45.205	ENSSFOG00015004093	tsen54	100	44.521	Scleropages_formosus
ENSCHIG00000019908	TSEN54	81	61.340	ENSSMAG00000012449	tsen54	99	43.536	Scophthalmus_maximus
ENSCHIG00000019908	TSEN54	97	45.753	ENSSDUG00000021506	tsen54	97	44.186	Seriola_dumerili
ENSCHIG00000019908	TSEN54	97	45.174	ENSSLDG00000016303	tsen54	97	43.992	Seriola_lalandi_dorsalis
ENSCHIG00000019908	TSEN54	79	52.914	ENSSPUG00000008988	TSEN54	97	52.900	Sphenodon_punctatus
ENSCHIG00000019908	TSEN54	80	39.904	ENSSPAG00000008047	tsen54	77	62.162	Stegastes_partitus
ENSCHIG00000019908	TSEN54	92	43.388	ENSSPAG00000008098	-	99	43.182	Stegastes_partitus
ENSCHIG00000019908	TSEN54	100	85.122	ENSSSCG00000036852	TSEN54	100	85.687	Sus_scrofa
ENSCHIG00000019908	TSEN54	86	53.084	ENSTGUG00000008548	TSEN54	100	53.187	Taeniopygia_guttata
ENSCHIG00000019908	TSEN54	97	44.444	ENSTRUG00000004230	tsen54	96	43.849	Takifugu_rubripes
ENSCHIG00000019908	TSEN54	99	44.123	ENSTNIG00000011281	tsen54	99	44.530	Tetraodon_nigroviridis
ENSCHIG00000019908	TSEN54	86	84.026	ENSTTRG00000015828	TSEN54	100	84.902	Tursiops_truncatus
ENSCHIG00000019908	TSEN54	81	82.558	ENSUAMG00000010045	TSEN54	100	82.326	Ursus_americanus
ENSCHIG00000019908	TSEN54	84	82.247	ENSUMAG00000008979	TSEN54	100	82.921	Ursus_maritimus
ENSCHIG00000019908	TSEN54	97	83.041	ENSVVUG00000011411	TSEN54	98	83.883	Vulpes_vulpes
ENSCHIG00000019908	TSEN54	99	48.767	ENSXETG00000012532	tsen54	98	70.833	Xenopus_tropicalis
ENSCHIG00000019908	TSEN54	97	43.936	ENSXCOG00000018245	tsen54	99	43.452	Xiphophorus_couchianus
ENSCHIG00000019908	TSEN54	97	48.431	ENSXMAG00000018818	tsen54	96	48.235	Xiphophorus_maculatus