EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000019982 (Gene tree)
Gene ID: -
Gene Symbol: REPIN1
Alias: AP4|H_DJ0584D14.12|RIP60|ZNF464|Zfp464
Full Name: replication initiator 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1680 bases
Position: chr4:7887892-7889571
Accession: 108635827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	1	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	2	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	3	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	4	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	5	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	6	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	7	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	8	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	9	10
ENSCHIP00000021768	zf-C2H2	PF00096.26	8.6e-64	10	10
ENSCHIP00000021768	zf-met	PF12874.7	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000029622	REPIN1-201	1605	XM_018046778	ENSCHIP00000021768	534 (aa)	XP_017902267	UPI000D18B931

Gene Model

Click here to download ENSCHIG00000019982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000019982's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000019982	REPIN1	92	39.883	ENSCHIG00000023988	ZNF768	51	39.310
ENSCHIG00000019982	REPIN1	99	43.056	ENSCHIG00000000391	ZNF236	62	43.262
ENSCHIG00000019982	REPIN1	92	39.228	ENSCHIG00000015369	ZNF317	71	38.907
ENSCHIG00000019982	REPIN1	92	44.503	ENSCHIG00000022075	ZNF628	62	44.503
ENSCHIG00000019982	REPIN1	91	33.617	ENSCHIG00000020779	-	86	32.794
ENSCHIG00000019982	REPIN1	92	33.333	ENSCHIG00000009605	ZNF574	93	32.921
ENSCHIG00000019982	REPIN1	93	38.264	ENSCHIG00000027113	ZNF699	78	34.316
ENSCHIG00000019982	REPIN1	95	38.782	ENSCHIG00000026481	-	80	37.500
ENSCHIG00000019982	REPIN1	93	34.536	ENSCHIG00000025825	ZNF652	50	34.536
ENSCHIG00000019982	REPIN1	92	43.373	ENSCHIG00000021099	ZNF32	71	46.316
ENSCHIG00000019982	REPIN1	92	39.931	ENSCHIG00000012483	ZNF2	64	39.931
ENSCHIG00000019982	REPIN1	92	31.128	ENSCHIG00000017805	ZNF646	91	30.417
ENSCHIG00000019982	REPIN1	92	31.594	ENSCHIG00000018756	ZNF526	81	31.217
ENSCHIG00000019982	REPIN1	92	31.655	ENSCHIG00000003371	ZNF319	99	31.618
ENSCHIG00000019982	REPIN1	93	38.667	ENSCHIG00000014937	ZNF235	71	36.895
ENSCHIG00000019982	REPIN1	96	40.129	ENSCHIG00000015070	ZNF226	75	40.129
ENSCHIG00000019982	REPIN1	93	37.755	ENSCHIG00000016463	-	63	40.260
ENSCHIG00000019982	REPIN1	99	36.136	ENSCHIG00000014415	ZNF81	67	36.000
ENSCHIG00000019982	REPIN1	99	36.084	ENSCHIG00000020931	-	85	35.510
ENSCHIG00000019982	REPIN1	95	33.600	ENSCHIG00000016562	-	75	35.714
ENSCHIG00000019982	REPIN1	92	39.098	ENSCHIG00000015741	-	86	39.098
ENSCHIG00000019982	REPIN1	94	32.484	ENSCHIG00000008992	-	91	32.536
ENSCHIG00000019982	REPIN1	91	41.367	ENSCHIG00000015281	ZFP1	95	43.846
ENSCHIG00000019982	REPIN1	92	51.852	ENSCHIG00000012252	ZNF865	79	35.025
ENSCHIG00000019982	REPIN1	92	35.165	ENSCHIG00000027072	ZNF112	75	35.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000019982	REPIN1	100	84.182	ENSCGRG00001017330	Repin1	91	84.124	Cricetulus_griseus_chok1gshd
ENSCHIG00000019982	REPIN1	100	83.091	ENSCGRG00000015472	Repin1	92	83.029	Cricetulus_griseus_crigri
ENSCHIG00000019982	REPIN1	100	84.574	ENSMAUG00000005776	Repin1	100	84.335	Mesocricetus_auratus
ENSCHIG00000019982	REPIN1	100	85.246	ENSMOCG00000021124	Repin1	95	82.543	Microtus_ochrogaster
ENSCHIG00000019982	REPIN1	99	51.807	ENSMODG00000003616	-	93	66.038	Monodelphis_domestica
ENSCHIG00000019982	REPIN1	100	84.517	MGP_CAROLIEiJ_G0028343	Repin1	100	84.278	Mus_caroli
ENSCHIG00000019982	REPIN1	100	84.517	ENSMUSG00000052751	Repin1	100	84.278	Mus_musculus
ENSCHIG00000019982	REPIN1	100	84.672	MGP_PahariEiJ_G0022097	Repin1	100	83.942	Mus_pahari
ENSCHIG00000019982	REPIN1	100	84.699	MGP_SPRETEiJ_G0029346	Repin1	100	84.461	Mus_spretus
ENSCHIG00000019982	REPIN1	100	85.401	ENSPEMG00000000870	Repin1	91	85.036	Peromyscus_maniculatus_bairdii
ENSCHIG00000019982	REPIN1	100	84.000	ENSRNOG00000008239	Repin1	91	83.759	Rattus_norvegicus