EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000020102 (Gene tree)
Gene ID: 102170487
Gene Symbol: NOM1
Alias: C7orf3|PPP1R113|SGD1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 12828 bases
Position: chr4:1526630-1539457
Accession: 102170487
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000021961	MA3	PF02847.17	1.4e-23	1	1
ENSCHIP00000021961	MIF4G	PF02854.19	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000029819	NOM1-201	3399	XM_018046642	ENSCHIP00000021961	835 (aa)	XP_017902131	UPI000D1956A4

Gene Model

Click here to download ENSCHIG00000020102's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020102's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020102	NOM1	100	69.222	ENSG00000146909	NOM1	95	70.195	Homo_sapiens
ENSCHIG00000020102	NOM1	62	65.835	ENSAPOG00000012073	nom1	82	56.268	Acanthochromis_polyacanthus
ENSCHIG00000020102	NOM1	81	73.669	ENSAMEG00000001412	NOM1	95	73.699	Ailuropoda_melanoleuca
ENSCHIG00000020102	NOM1	71	66.219	ENSACIG00000018050	nom1	79	57.206	Amphilophus_citrinellus
ENSCHIG00000020102	NOM1	62	65.067	ENSAOCG00000006229	nom1	82	56.472	Amphiprion_ocellaris
ENSCHIG00000020102	NOM1	62	65.067	ENSAPEG00000015994	nom1	82	56.223	Amphiprion_percula
ENSCHIG00000020102	NOM1	84	55.201	ENSATEG00000005405	nom1	81	58.211	Anabas_testudineus
ENSCHIG00000020102	NOM1	79	61.840	ENSAPLG00000006585	NOM1	99	61.237	Anas_platyrhynchos
ENSCHIG00000020102	NOM1	71	63.350	ENSACAG00000011192	NOM1	84	59.358	Anolis_carolinensis
ENSCHIG00000020102	NOM1	63	64.972	ENSACLG00000000033	nom1	81	57.204	Astatotilapia_calliptera
ENSCHIG00000020102	NOM1	62	64.571	ENSAMXG00000041486	nom1	81	56.436	Astyanax_mexicanus
ENSCHIG00000020102	NOM1	100	92.353	ENSBTAG00000016435	NOM1	100	92.235	Bos_taurus
ENSCHIG00000020102	NOM1	100	68.930	ENSCJAG00000004336	NOM1	95	68.803	Callithrix_jacchus
ENSCHIG00000020102	NOM1	54	60.370	ENSCAFG00000029845	-	92	60.996	Canis_familiaris
ENSCHIG00000020102	NOM1	95	68.667	ENSCAFG00020005121	NOM1	95	69.649	Canis_lupus_dingo
ENSCHIG00000020102	NOM1	95	70.675	ENSTSYG00000000227	NOM1	95	69.779	Carlito_syrichta
ENSCHIG00000020102	NOM1	62	79.350	ENSCAPG00000016273	NOM1	100	79.350	Cavia_aperea
ENSCHIG00000020102	NOM1	97	62.602	ENSCPOG00000025538	NOM1	96	62.485	Cavia_porcellus
ENSCHIG00000020102	NOM1	91	82.783	ENSCCAG00000014944	NOM1	100	83.146	Cebus_capucinus
ENSCHIG00000020102	NOM1	85	70.950	ENSCLAG00000000267	NOM1	80	69.754	Chinchilla_lanigera
ENSCHIG00000020102	NOM1	85	70.377	ENSCPBG00000018215	NOM1	70	70.377	Chrysemys_picta_bellii
ENSCHIG00000020102	NOM1	81	35.402	ENSCING00000005248	-	88	36.999	Ciona_intestinalis
ENSCHIG00000020102	NOM1	63	79.026	ENSCANG00000041984	NOM1	92	78.771	Colobus_angolensis_palliatus
ENSCHIG00000020102	NOM1	81	70.657	ENSCGRG00001020293	Nom1	92	66.285	Cricetulus_griseus_chok1gshd
ENSCHIG00000020102	NOM1	63	76.923	ENSCGRG00000005405	Nom1	100	76.923	Cricetulus_griseus_crigri
ENSCHIG00000020102	NOM1	86	53.434	ENSCSEG00000000932	nom1	77	56.601	Cynoglossus_semilaevis
ENSCHIG00000020102	NOM1	96	51.804	ENSCVAG00000007562	nom1	81	57.910	Cyprinodon_variegatus
ENSCHIG00000020102	NOM1	96	52.600	ENSDARG00000060027	nom1	99	67.355	Danio_rerio
ENSCHIG00000020102	NOM1	66	62.700	ENSDORG00000015682	Nom1	98	59.828	Dipodomys_ordii
ENSCHIG00000020102	NOM1	59	39.010	FBgn0035336	CG9004	77	36.756	Drosophila_melanogaster
ENSCHIG00000020102	NOM1	92	66.745	ENSETEG00000003104	NOM1	95	53.818	Echinops_telfairi
ENSCHIG00000020102	NOM1	51	49.885	ENSEBUG00000010077	nom1	90	51.707	Eptatretus_burgeri
ENSCHIG00000020102	NOM1	81	77.569	ENSEASG00005001489	NOM1	95	73.325	Equus_asinus_asinus
ENSCHIG00000020102	NOM1	81	76.879	ENSECAG00000007596	NOM1	89	72.924	Equus_caballus
ENSCHIG00000020102	NOM1	62	65.583	ENSELUG00000006266	nom1	81	56.738	Esox_lucius
ENSCHIG00000020102	NOM1	95	71.782	ENSFCAG00000006467	NOM1	95	70.537	Felis_catus
ENSCHIG00000020102	NOM1	82	60.714	ENSFALG00000006904	NOM1	97	60.350	Ficedula_albicollis
ENSCHIG00000020102	NOM1	96	65.898	ENSFDAG00000016241	NOM1	97	66.135	Fukomys_damarensis
ENSCHIG00000020102	NOM1	62	65.392	ENSFHEG00000015974	nom1	81	58.443	Fundulus_heteroclitus
ENSCHIG00000020102	NOM1	62	62.042	ENSGMOG00000005129	nom1	89	53.592	Gadus_morhua
ENSCHIG00000020102	NOM1	99	55.674	ENSGALG00000006437	NOM1	76	60.492	Gallus_gallus
ENSCHIG00000020102	NOM1	62	64.368	ENSGAFG00000003211	nom1	81	57.394	Gambusia_affinis
ENSCHIG00000020102	NOM1	95	58.262	ENSGAGG00000014347	NOM1	82	63.028	Gopherus_agassizii
ENSCHIG00000020102	NOM1	99	69.302	ENSGGOG00000010920	NOM1	88	70.330	Gorilla_gorilla
ENSCHIG00000020102	NOM1	94	52.033	ENSHBUG00000014616	nom1	81	56.919	Haplochromis_burtoni
ENSCHIG00000020102	NOM1	96	68.005	ENSHGLG00000007392	NOM1	96	67.665	Heterocephalus_glaber_female
ENSCHIG00000020102	NOM1	83	82.595	ENSHGLG00100014407	NOM1	96	82.595	Heterocephalus_glaber_male
ENSCHIG00000020102	NOM1	63	64.773	ENSIPUG00000013980	nom1	82	57.720	Ictalurus_punctatus
ENSCHIG00000020102	NOM1	68	75.826	ENSSTOG00000031736	NOM1	99	76.502	Ictidomys_tridecemlineatus
ENSCHIG00000020102	NOM1	58	80.368	ENSJJAG00000011716	Nom1	99	80.368	Jaculus_jaculus
ENSCHIG00000020102	NOM1	96	51.429	ENSLACG00000011777	NOM1	82	58.934	Latimeria_chalumnae
ENSCHIG00000020102	NOM1	95	53.502	ENSLOCG00000012452	nom1	83	59.571	Lepisosteus_oculatus
ENSCHIG00000020102	NOM1	95	63.164	ENSLAFG00000007119	NOM1	92	63.346	Loxodonta_africana
ENSCHIG00000020102	NOM1	100	66.092	ENSMMUG00000039033	NOM1	95	66.221	Macaca_mulatta
ENSCHIG00000020102	NOM1	63	79.849	ENSMLEG00000037062	NOM1	100	79.849	Mandrillus_leucophaeus
ENSCHIG00000020102	NOM1	95	51.251	ENSMAMG00000004118	nom1	82	56.320	Mastacembelus_armatus
ENSCHIG00000020102	NOM1	63	64.783	ENSMZEG00005000384	nom1	81	57.061	Maylandia_zebra
ENSCHIG00000020102	NOM1	83	60.938	ENSMGAG00000005051	NOM1	97	60.813	Meleagris_gallopavo
ENSCHIG00000020102	NOM1	95	66.626	ENSMAUG00000017988	Nom1	91	67.054	Mesocricetus_auratus
ENSCHIG00000020102	NOM1	95	70.330	ENSMICG00000017531	NOM1	95	69.373	Microcebus_murinus
ENSCHIG00000020102	NOM1	97	65.448	ENSMOCG00000015962	Nom1	95	66.022	Microtus_ochrogaster
ENSCHIG00000020102	NOM1	84	53.288	ENSMMOG00000004419	nom1	80	53.230	Mola_mola
ENSCHIG00000020102	NOM1	96	62.016	ENSMODG00000005177	NOM1	93	64.115	Monodelphis_domestica
ENSCHIG00000020102	NOM1	77	59.265	ENSMALG00000008800	nom1	80	58.851	Monopterus_albus
ENSCHIG00000020102	NOM1	96	63.876	MGP_CAROLIEiJ_G0027043	Nom1	90	64.295	Mus_caroli
ENSCHIG00000020102	NOM1	96	64.748	ENSMUSG00000001569	Nom1	90	64.096	Mus_musculus
ENSCHIG00000020102	NOM1	96	64.320	MGP_SPRETEiJ_G0028039	Nom1	90	64.475	Mus_spretus
ENSCHIG00000020102	NOM1	81	70.145	ENSMPUG00000009745	NOM1	99	70.520	Mustela_putorius_furo
ENSCHIG00000020102	NOM1	72	75.530	ENSMLUG00000009129	NOM1	94	78.671	Myotis_lucifugus
ENSCHIG00000020102	NOM1	95	52.169	ENSNBRG00000016429	nom1	94	65.966	Neolamprologus_brichardi
ENSCHIG00000020102	NOM1	99	67.820	ENSNLEG00000000238	NOM1	95	68.370	Nomascus_leucogenys
ENSCHIG00000020102	NOM1	86	63.187	ENSMEUG00000001108	NOM1	80	63.187	Notamacropus_eugenii
ENSCHIG00000020102	NOM1	85	57.807	ENSOPRG00000014676	NOM1	85	57.286	Ochotona_princeps
ENSCHIG00000020102	NOM1	81	69.408	ENSODEG00000009399	NOM1	97	68.975	Octodon_degus
ENSCHIG00000020102	NOM1	84	56.044	ENSONIG00000005958	nom1	86	58.163	Oreochromis_niloticus
ENSCHIG00000020102	NOM1	54	72.549	ENSOANG00000006139	-	97	72.549	Ornithorhynchus_anatinus
ENSCHIG00000020102	NOM1	95	70.097	ENSOCUG00000004071	-	95	69.682	Oryctolagus_cuniculus
ENSCHIG00000020102	NOM1	93	57.526	ENSOCUG00000021448	-	97	57.218	Oryctolagus_cuniculus
ENSCHIG00000020102	NOM1	62	63.962	ENSORLG00000010541	nom1	93	51.621	Oryzias_latipes
ENSCHIG00000020102	NOM1	62	63.962	ENSORLG00020010789	nom1	89	55.385	Oryzias_latipes_hni
ENSCHIG00000020102	NOM1	62	64.205	ENSOMEG00000004219	nom1	82	56.710	Oryzias_melastigma
ENSCHIG00000020102	NOM1	69	75.773	ENSOGAG00000001124	NOM1	93	77.249	Otolemur_garnettii
ENSCHIG00000020102	NOM1	88	95.907	ENSOARG00000007261	NOM1	99	95.907	Ovis_aries
ENSCHIG00000020102	NOM1	100	69.595	ENSPPAG00000041374	NOM1	95	70.280	Pan_paniscus
ENSCHIG00000020102	NOM1	81	74.165	ENSPTIG00000013532	NOM1	93	73.837	Panthera_tigris_altaica
ENSCHIG00000020102	NOM1	100	68.786	ENSPTRG00000019917	NOM1	95	70.438	Pan_troglodytes
ENSCHIG00000020102	NOM1	100	69.266	ENSPANG00000007605	NOM1	95	68.961	Papio_anubis
ENSCHIG00000020102	NOM1	96	51.839	ENSPKIG00000005825	nom1	82	56.340	Paramormyrops_kingsleyae
ENSCHIG00000020102	NOM1	66	67.986	ENSPSIG00000017848	NOM1	92	67.986	Pelodiscus_sinensis
ENSCHIG00000020102	NOM1	82	57.986	ENSPMGG00000002577	nom1	81	58.126	Periophthalmus_magnuspinnatus
ENSCHIG00000020102	NOM1	95	65.114	ENSPEMG00000024180	Nom1	95	65.983	Peromyscus_maniculatus_bairdii
ENSCHIG00000020102	NOM1	96	61.397	ENSPCIG00000027941	NOM1	78	67.330	Phascolarctos_cinereus
ENSCHIG00000020102	NOM1	62	65.333	ENSPLAG00000007856	nom1	81	57.536	Poecilia_latipinna
ENSCHIG00000020102	NOM1	97	51.011	ENSPREG00000008850	nom1	81	57.895	Poecilia_reticulata
ENSCHIG00000020102	NOM1	100	65.817	ENSPPYG00000018222	NOM1	95	66.464	Pongo_abelii
ENSCHIG00000020102	NOM1	91	56.599	ENSPCAG00000000440	NOM1	96	56.430	Procavia_capensis
ENSCHIG00000020102	NOM1	63	78.343	ENSPCOG00000015222	NOM1	100	78.343	Propithecus_coquereli
ENSCHIG00000020102	NOM1	100	71.528	ENSPVAG00000014760	NOM1	95	70.979	Pteropus_vampyrus
ENSCHIG00000020102	NOM1	63	64.030	ENSPNYG00000006975	nom1	95	64.326	Pundamilia_nyererei
ENSCHIG00000020102	NOM1	65	62.774	ENSPNAG00000011085	nom1	78	57.244	Pygocentrus_nattereri
ENSCHIG00000020102	NOM1	95	60.822	ENSRNOG00000048969	AABR07059041.1	95	61.323	Rattus_norvegicus
ENSCHIG00000020102	NOM1	100	68.894	ENSRBIG00000037042	NOM1	95	67.594	Rhinopithecus_bieti
ENSCHIG00000020102	NOM1	100	68.664	ENSRROG00000037293	NOM1	95	67.231	Rhinopithecus_roxellana
ENSCHIG00000020102	NOM1	84	65.596	ENSSHAG00000017998	-	98	65.657	Sarcophilus_harrisii
ENSCHIG00000020102	NOM1	54	62.693	ENSSHAG00000002835	-	99	68.281	Sarcophilus_harrisii
ENSCHIG00000020102	NOM1	57	63.768	ENSSFOG00015003196	nom1	99	63.768	Scleropages_formosus
ENSCHIG00000020102	NOM1	95	51.777	ENSSMAG00000011047	nom1	81	58.129	Scophthalmus_maximus
ENSCHIG00000020102	NOM1	64	65.441	ENSSDUG00000006834	nom1	81	58.037	Seriola_dumerili
ENSCHIG00000020102	NOM1	64	65.556	ENSSLDG00000021812	nom1	81	57.511	Seriola_lalandi_dorsalis
ENSCHIG00000020102	NOM1	96	50.237	ENSSPUG00000002556	NOM1	89	70.382	Sphenodon_punctatus
ENSCHIG00000020102	NOM1	64	64.338	ENSSPAG00000000953	nom1	82	57.462	Stegastes_partitus
ENSCHIG00000020102	NOM1	84	59.134	ENSTGUG00000000702	-	97	59.885	Taeniopygia_guttata
ENSCHIG00000020102	NOM1	65	63.670	ENSTRUG00000010239	nom1	81	56.671	Takifugu_rubripes
ENSCHIG00000020102	NOM1	84	54.137	ENSTNIG00000012783	nom1	99	51.266	Tetraodon_nigroviridis
ENSCHIG00000020102	NOM1	98	75.443	ENSTTRG00000009691	NOM1	92	76.577	Tursiops_truncatus
ENSCHIG00000020102	NOM1	95	69.395	ENSUAMG00000025450	NOM1	95	69.240	Ursus_americanus
ENSCHIG00000020102	NOM1	84	73.859	ENSUMAG00000014275	NOM1	95	74.599	Ursus_maritimus
ENSCHIG00000020102	NOM1	95	70.299	ENSVVUG00000002608	NOM1	95	70.241	Vulpes_vulpes
ENSCHIG00000020102	NOM1	96	51.240	ENSXETG00000021611	nom1	82	70.732	Xenopus_tropicalis
ENSCHIG00000020102	NOM1	97	49.769	ENSXMAG00000002451	nom1	81	57.956	Xiphophorus_maculatus