EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000020110 (Gene tree)
Gene ID: 102173840
Gene Symbol: R3HDM4
Alias: C19orf22|MGC16353
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 9754 bases
Position: chr7:67033299-67043052
Accession: 102173840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022010	R3H	PF01424.22	2e-06	1	1
ENSCHIP00000022013	R3H	PF01424.22	2.1e-06	1	1
ENSCHIP00000021999	R3H	PF01424.22	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000029868	R3HDM4-202	792	-	ENSCHIP00000022010	263 (aa)	-	UPI000D195945
ENSCHIT00000029857	R3HDM4-201	2087	XM_018050491	ENSCHIP00000021999	272 (aa)	XP_017905980	UPI0006B1217B
ENSCHIT00000029871	R3HDM4-203	783	-	ENSCHIP00000022013	260 (aa)	-	UPI000D194F70

Gene Model

Click here to download ENSCHIG00000020110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020110's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020110	R3HDM4	100	92.279	ENSG00000198858	R3HDM4	100	92.279	Homo_sapiens
ENSCHIG00000020110	R3HDM4	94	94.672	ENSAMEG00000003001	R3HDM4	100	94.672	Ailuropoda_melanoleuca
ENSCHIG00000020110	R3HDM4	91	57.983	ENSACIG00000004672	r3hdm4	91	57.983	Amphilophus_citrinellus
ENSCHIG00000020110	R3HDM4	90	53.617	ENSATEG00000015913	r3hdm4	91	54.894	Anabas_testudineus
ENSCHIG00000020110	R3HDM4	93	95.473	ENSANAG00000029748	R3HDM4	100	95.473	Aotus_nancymaae
ENSCHIG00000020110	R3HDM4	100	98.529	ENSBTAG00000046406	R3HDM4	100	98.529	Bos_taurus
ENSCHIG00000020110	R3HDM4	97	92.430	ENSCJAG00000020114	R3HDM4	94	92.430	Callithrix_jacchus
ENSCHIG00000020110	R3HDM4	100	92.279	ENSCAFG00000019665	R3HDM4	100	92.279	Canis_familiaris
ENSCHIG00000020110	R3HDM4	100	91.912	ENSCAFG00020016880	R3HDM4	100	91.912	Canis_lupus_dingo
ENSCHIG00000020110	R3HDM4	96	92.000	ENSCCAG00000019955	R3HDM4	91	92.000	Cebus_capucinus
ENSCHIG00000020110	R3HDM4	100	89.781	ENSCATG00000037269	R3HDM4	100	90.511	Cercocebus_atys
ENSCHIG00000020110	R3HDM4	94	91.803	ENSCLAG00000007094	R3HDM4	100	91.803	Chinchilla_lanigera
ENSCHIG00000020110	R3HDM4	100	90.809	ENSCSAG00000012574	R3HDM4	100	90.809	Chlorocebus_sabaeus
ENSCHIG00000020110	R3HDM4	99	69.349	ENSCPBG00000009805	R3HDM4	98	69.349	Chrysemys_picta_bellii
ENSCHIG00000020110	R3HDM4	98	91.538	ENSCANG00000040439	R3HDM4	91	91.538	Colobus_angolensis_palliatus
ENSCHIG00000020110	R3HDM4	97	85.992	ENSCGRG00001021650	R3hdm4	100	83.824	Cricetulus_griseus_chok1gshd
ENSCHIG00000020110	R3HDM4	97	85.992	ENSCGRG00000013169	R3hdm4	100	83.824	Cricetulus_griseus_crigri
ENSCHIG00000020110	R3HDM4	91	54.202	ENSCSEG00000018211	r3hdm4	91	54.202	Cynoglossus_semilaevis
ENSCHIG00000020110	R3HDM4	91	57.741	ENSCVAG00000017127	r3hdm4	93	56.800	Cyprinodon_variegatus
ENSCHIG00000020110	R3HDM4	98	87.984	ENSDORG00000006605	R3hdm4	100	90.612	Dipodomys_ordii
ENSCHIG00000020110	R3HDM4	100	91.923	ENSEASG00005021556	R3HDM4	97	89.850	Equus_asinus_asinus
ENSCHIG00000020110	R3HDM4	94	95.082	ENSECAG00000000003	R3HDM4	100	93.015	Equus_caballus
ENSCHIG00000020110	R3HDM4	100	93.382	ENSFCAG00000042437	R3HDM4	100	93.382	Felis_catus
ENSCHIG00000020110	R3HDM4	93	69.136	ENSFALG00000013938	R3HDM4	100	69.136	Ficedula_albicollis
ENSCHIG00000020110	R3HDM4	94	90.612	ENSFDAG00000017040	R3HDM4	100	90.612	Fukomys_damarensis
ENSCHIG00000020110	R3HDM4	100	53.650	ENSFHEG00000017636	r3hdm4	100	53.650	Fundulus_heteroclitus
ENSCHIG00000020110	R3HDM4	91	52.941	ENSGMOG00000001231	r3hdm4	98	53.200	Gadus_morhua
ENSCHIG00000020110	R3HDM4	100	64.179	ENSGALG00000001998	R3HDM4	99	66.160	Gallus_gallus
ENSCHIG00000020110	R3HDM4	100	53.846	ENSGAFG00000004173	r3hdm4	100	53.846	Gambusia_affinis
ENSCHIG00000020110	R3HDM4	93	70.370	ENSGAGG00000019698	R3HDM4	98	67.816	Gopherus_agassizii
ENSCHIG00000020110	R3HDM4	94	95.082	ENSGGOG00000008040	R3HDM4	100	95.082	Gorilla_gorilla
ENSCHIG00000020110	R3HDM4	91	56.904	ENSHBUG00000014810	r3hdm4	91	58.159	Haplochromis_burtoni
ENSCHIG00000020110	R3HDM4	100	85.294	ENSHGLG00000016194	R3HDM4	100	86.029	Heterocephalus_glaber_female
ENSCHIG00000020110	R3HDM4	91	55.085	ENSHCOG00000008422	r3hdm4	91	55.085	Hippocampus_comes
ENSCHIG00000020110	R3HDM4	91	56.303	ENSIPUG00000006716	r3hdm4	91	56.303	Ictalurus_punctatus
ENSCHIG00000020110	R3HDM4	94	91.393	ENSSTOG00000023015	R3HDM4	100	91.393	Ictidomys_tridecemlineatus
ENSCHIG00000020110	R3HDM4	99	87.132	ENSJJAG00000012475	R3hdm4	100	87.132	Jaculus_jaculus
ENSCHIG00000020110	R3HDM4	91	57.741	ENSKMAG00000005853	r3hdm4	93	56.800	Kryptolebias_marmoratus
ENSCHIG00000020110	R3HDM4	91	55.649	ENSLBEG00000000730	r3hdm4	91	55.649	Labrus_bergylta
ENSCHIG00000020110	R3HDM4	99	58.527	ENSLACG00000016445	R3HDM4	99	58.527	Latimeria_chalumnae
ENSCHIG00000020110	R3HDM4	92	57.741	ENSLOCG00000002423	r3hdm4	91	57.741	Lepisosteus_oculatus
ENSCHIG00000020110	R3HDM4	96	89.804	ENSLAFG00000017796	R3HDM4	98	89.804	Loxodonta_africana
ENSCHIG00000020110	R3HDM4	100	91.176	ENSMFAG00000044131	R3HDM4	100	91.176	Macaca_fascicularis
ENSCHIG00000020110	R3HDM4	100	83.456	ENSMMUG00000009682	R3HDM4	90	94.170	Macaca_mulatta
ENSCHIG00000020110	R3HDM4	94	94.286	ENSMNEG00000044115	R3HDM4	99	94.672	Macaca_nemestrina
ENSCHIG00000020110	R3HDM4	99	89.615	ENSMLEG00000035693	R3HDM4	95	90.000	Mandrillus_leucophaeus
ENSCHIG00000020110	R3HDM4	78	58.738	ENSMAMG00000005652	r3hdm4	82	58.738	Mastacembelus_armatus
ENSCHIG00000020110	R3HDM4	98	84.375	ENSMAUG00000010611	R3hdm4	99	84.825	Mesocricetus_auratus
ENSCHIG00000020110	R3HDM4	100	89.706	ENSMICG00000010124	R3HDM4	100	89.706	Microcebus_murinus
ENSCHIG00000020110	R3HDM4	99	83.525	ENSMOCG00000002646	R3hdm4	100	82.288	Microtus_ochrogaster
ENSCHIG00000020110	R3HDM4	91	55.462	ENSMMOG00000008253	r3hdm4	92	55.462	Mola_mola
ENSCHIG00000020110	R3HDM4	89	68.534	ENSMODG00000005698	R3HDM4	100	68.534	Monodelphis_domestica
ENSCHIG00000020110	R3HDM4	91	55.882	ENSMALG00000018856	r3hdm4	91	55.882	Monopterus_albus
ENSCHIG00000020110	R3HDM4	97	83.984	MGP_CAROLIEiJ_G0015551	R3hdm4	100	82.657	Mus_caroli
ENSCHIG00000020110	R3HDM4	97	83.984	ENSMUSG00000035781	R3hdm4	100	82.657	Mus_musculus
ENSCHIG00000020110	R3HDM4	97	83.984	MGP_PahariEiJ_G0030964	R3hdm4	100	82.657	Mus_pahari
ENSCHIG00000020110	R3HDM4	97	83.984	MGP_SPRETEiJ_G0016369	-	84	82.657	Mus_spretus
ENSCHIG00000020110	R3HDM4	96	92.000	ENSMPUG00000009394	R3HDM4	93	92.000	Mustela_putorius_furo
ENSCHIG00000020110	R3HDM4	91	56.485	ENSNBRG00000004438	r3hdm4	91	57.741	Neolamprologus_brichardi
ENSCHIG00000020110	R3HDM4	87	93.074	ENSNLEG00000001022	R3HDM4	100	93.074	Nomascus_leucogenys
ENSCHIG00000020110	R3HDM4	91	68.354	ENSMEUG00000011020	R3HDM4	99	68.354	Notamacropus_eugenii
ENSCHIG00000020110	R3HDM4	100	88.235	ENSODEG00000011745	R3HDM4	100	88.235	Octodon_degus
ENSCHIG00000020110	R3HDM4	100	52.920	ENSONIG00000012675	r3hdm4	92	54.015	Oreochromis_niloticus
ENSCHIG00000020110	R3HDM4	91	57.563	ENSOMEG00000003005	r3hdm4	91	57.563	Oryzias_melastigma
ENSCHIG00000020110	R3HDM4	99	89.655	ENSOGAG00000025656	R3HDM4	97	89.655	Otolemur_garnettii
ENSCHIG00000020110	R3HDM4	94	99.590	ENSOARG00000009945	R3HDM4	100	99.590	Ovis_aries
ENSCHIG00000020110	R3HDM4	94	95.492	ENSPPAG00000042371	R3HDM4	100	95.492	Pan_paniscus
ENSCHIG00000020110	R3HDM4	100	91.176	ENSPANG00000015203	R3HDM4	100	91.176	Papio_anubis
ENSCHIG00000020110	R3HDM4	88	55.652	ENSPKIG00000007421	r3hdm4	100	50.368	Paramormyrops_kingsleyae
ENSCHIG00000020110	R3HDM4	93	51.575	ENSPMGG00000020467	r3hdm4	95	51.575	Periophthalmus_magnuspinnatus
ENSCHIG00000020110	R3HDM4	99	83.835	ENSPEMG00000008365	Tmem259	100	88.889	Peromyscus_maniculatus_bairdii
ENSCHIG00000020110	R3HDM4	91	57.563	ENSPFOG00000003199	r3hdm4	93	56.627	Poecilia_formosa
ENSCHIG00000020110	R3HDM4	91	57.143	ENSPMEG00000014183	r3hdm4	93	56.225	Poecilia_mexicana
ENSCHIG00000020110	R3HDM4	100	54.212	ENSPREG00000010709	r3hdm4	100	54.212	Poecilia_reticulata
ENSCHIG00000020110	R3HDM4	100	89.338	ENSPPYG00000009297	R3HDM4	100	89.338	Pongo_abelii
ENSCHIG00000020110	R3HDM4	58	91.447	ENSPCAG00000010997	R3HDM4	56	91.447	Procavia_capensis
ENSCHIG00000020110	R3HDM4	100	89.706	ENSPCOG00000016785	R3HDM4	100	89.706	Propithecus_coquereli
ENSCHIG00000020110	R3HDM4	91	56.904	ENSPNYG00000017489	r3hdm4	91	58.159	Pundamilia_nyererei
ENSCHIG00000020110	R3HDM4	99	82.288	ENSRNOG00000011489	R3hdm4	100	82.657	Rattus_norvegicus
ENSCHIG00000020110	R3HDM4	94	95.492	ENSRROG00000028842	R3HDM4	91	95.492	Rhinopithecus_roxellana
ENSCHIG00000020110	R3HDM4	95	91.600	ENSSBOG00000019298	R3HDM4	73	92.000	Saimiri_boliviensis_boliviensis
ENSCHIG00000020110	R3HDM4	56	71.918	ENSSHAG00000003036	-	100	71.918	Sarcophilus_harrisii
ENSCHIG00000020110	R3HDM4	91	55.462	ENSSFOG00015020574	r3hdm4	87	55.462	Scleropages_formosus
ENSCHIG00000020110	R3HDM4	91	57.322	ENSSMAG00000021090	r3hdm4	68	57.322	Scophthalmus_maximus
ENSCHIG00000020110	R3HDM4	91	57.741	ENSSDUG00000008488	r3hdm4	91	57.741	Seriola_dumerili
ENSCHIG00000020110	R3HDM4	91	57.741	ENSSLDG00000025328	r3hdm4	91	57.741	Seriola_lalandi_dorsalis
ENSCHIG00000020110	R3HDM4	92	72.083	ENSSPUG00000005434	R3HDM4	95	71.193	Sphenodon_punctatus
ENSCHIG00000020110	R3HDM4	90	54.661	ENSSPAG00000002562	r3hdm4	90	54.661	Stegastes_partitus
ENSCHIG00000020110	R3HDM4	100	95.588	ENSSSCG00000013419	R3HDM4	100	95.588	Sus_scrofa
ENSCHIG00000020110	R3HDM4	80	65.550	ENSTGUG00000000663	R3HDM4	100	65.550	Taeniopygia_guttata
ENSCHIG00000020110	R3HDM4	94	93.852	ENSTTRG00000001470	R3HDM4	100	93.852	Tursiops_truncatus
ENSCHIG00000020110	R3HDM4	86	95.516	ENSUAMG00000005751	R3HDM4	100	95.516	Ursus_americanus
ENSCHIG00000020110	R3HDM4	100	93.015	ENSVVUG00000022685	R3HDM4	100	93.015	Vulpes_vulpes
ENSCHIG00000020110	R3HDM4	92	47.479	ENSXETG00000033624	R3HDM4	92	47.479	Xenopus_tropicalis
ENSCHIG00000020110	R3HDM4	100	53.650	ENSXCOG00000005127	r3hdm4	100	53.650	Xiphophorus_couchianus
ENSCHIG00000020110	R3HDM4	100	53.846	ENSXMAG00000022875	r3hdm4	100	53.846	Xiphophorus_maculatus