EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000020139 (Gene tree)
Gene ID: 102185565
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 35854 bases
Position: chr8:62501112-62536965
Accession: 102185565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022040	MIF4G_like	PF09088.11	2.9e-36	1	1
ENSCHIP00000022054	MIF4G_like	PF09088.11	3e-36	1	1
ENSCHIP00000022040	MIF4G_like_2	PF09090.11	1.2e-85	1	1
ENSCHIP00000022054	MIF4G_like_2	PF09090.11	1.3e-85	1	1
ENSCHIP00000022040	MIF4G	PF02854.19	2.5e-29	1	1
ENSCHIP00000022054	MIF4G	PF02854.19	2.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000029913	NCBP1-202	2388	-	ENSCHIP00000022054	795 (aa)	-	UPI000D18E10B
ENSCHIT00000029899	NCBP1-201	2373	XM_018052200	ENSCHIP00000022040	790 (aa)	XP_017907689	UPI00029D479E

Gene Model

Click here to download ENSCHIG00000020139's gene model file

Pathways

Pathway ID	Pathway Name	Source
chx03013	RNA transport	KEGG
chx03015	mRNA surveillance pathway	KEGG
chx03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020139's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020139	NCBP1	100	98.861	ENSG00000136937	NCBP1	100	98.861	Homo_sapiens
ENSCHIG00000020139	NCBP1	99	83.627	ENSAPOG00000008002	NCBP1	99	82.997	Acanthochromis_polyacanthus
ENSCHIG00000020139	NCBP1	100	98.864	ENSAMEG00000004763	NCBP1	100	98.864	Ailuropoda_melanoleuca
ENSCHIG00000020139	NCBP1	99	83.985	ENSACIG00000000274	NCBP1	99	83.354	Amphilophus_citrinellus
ENSCHIG00000020139	NCBP1	99	83.753	ENSAOCG00000021148	NCBP1	99	83.123	Amphiprion_ocellaris
ENSCHIG00000020139	NCBP1	99	83.753	ENSAPEG00000001701	NCBP1	99	83.123	Amphiprion_percula
ENSCHIG00000020139	NCBP1	99	83.123	ENSATEG00000006929	NCBP1	99	82.746	Anabas_testudineus
ENSCHIG00000020139	NCBP1	95	90.092	ENSAPLG00000016318	NCBP1	100	90.225	Anas_platyrhynchos
ENSCHIG00000020139	NCBP1	100	87.141	ENSACAG00000004409	NCBP1	87	87.016	Anolis_carolinensis
ENSCHIG00000020139	NCBP1	100	95.949	ENSANAG00000025744	NCBP1	99	98.881	Aotus_nancymaae
ENSCHIG00000020139	NCBP1	99	82.872	ENSACLG00000014812	NCBP1	99	82.682	Astatotilapia_calliptera
ENSCHIG00000020139	NCBP1	99	81.910	ENSAMXG00000016364	NCBP1	99	81.407	Astyanax_mexicanus
ENSCHIG00000020139	NCBP1	100	99.494	ENSBTAG00000009732	NCBP1	100	99.494	Bos_taurus
ENSCHIG00000020139	NCBP1	99	34.772	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
ENSCHIG00000020139	NCBP1	100	98.861	ENSCJAG00000010840	NCBP1	100	98.984	Callithrix_jacchus
ENSCHIG00000020139	NCBP1	100	99.241	ENSCAFG00000002445	NCBP1	100	99.241	Canis_familiaris
ENSCHIG00000020139	NCBP1	99	98.352	ENSCAFG00020017997	NCBP1	100	99.122	Canis_lupus_dingo
ENSCHIG00000020139	NCBP1	52	96.602	ENSTSYG00000011914	NCBP1	98	98.746	Carlito_syrichta
ENSCHIG00000020139	NCBP1	81	88.750	ENSCAPG00000014252	NCBP1	90	88.594	Cavia_aperea
ENSCHIG00000020139	NCBP1	97	96.871	ENSCPOG00000012573	NCBP1	99	96.871	Cavia_porcellus
ENSCHIG00000020139	NCBP1	100	98.987	ENSCCAG00000032297	NCBP1	100	98.987	Cebus_capucinus
ENSCHIG00000020139	NCBP1	100	98.861	ENSCATG00000010052	NCBP1	100	98.861	Cercocebus_atys
ENSCHIG00000020139	NCBP1	100	98.861	ENSCLAG00000014339	NCBP1	100	98.861	Chinchilla_lanigera
ENSCHIG00000020139	NCBP1	100	98.861	ENSCSAG00000010929	NCBP1	100	98.861	Chlorocebus_sabaeus
ENSCHIG00000020139	NCBP1	91	95.763	ENSCHOG00000010332	NCBP1	91	95.763	Choloepus_hoffmanni
ENSCHIG00000020139	NCBP1	100	85.535	ENSCPBG00000024344	NCBP1	99	90.000	Chrysemys_picta_bellii
ENSCHIG00000020139	NCBP1	99	54.362	ENSCING00000008990	-	99	54.235	Ciona_intestinalis
ENSCHIG00000020139	NCBP1	99	53.325	ENSCSAVG00000005300	-	99	54.450	Ciona_savignyi
ENSCHIG00000020139	NCBP1	100	98.861	ENSCANG00000036913	NCBP1	100	98.861	Colobus_angolensis_palliatus
ENSCHIG00000020139	NCBP1	100	97.722	ENSCGRG00001015771	Ncbp1	100	97.722	Cricetulus_griseus_chok1gshd
ENSCHIG00000020139	NCBP1	99	97.821	ENSCGRG00000010311	Ncbp1	100	97.821	Cricetulus_griseus_crigri
ENSCHIG00000020139	NCBP1	99	82.746	ENSCSEG00000012377	NCBP1	99	83.077	Cynoglossus_semilaevis
ENSCHIG00000020139	NCBP1	99	80.881	ENSCVAG00000008795	NCBP1	99	81.509	Cyprinodon_variegatus
ENSCHIG00000020139	NCBP1	100	97.722	ENSDNOG00000006885	NCBP1	100	97.722	Dasypus_novemcinctus
ENSCHIG00000020139	NCBP1	100	93.451	ENSDORG00000013652	Ncbp1	100	93.451	Dipodomys_ordii
ENSCHIG00000020139	NCBP1	84	34.018	FBgn0038887	CG7907	87	34.018	Drosophila_melanogaster
ENSCHIG00000020139	NCBP1	100	57.143	FBgn0022942	Cbp80	100	57.625	Drosophila_melanogaster
ENSCHIG00000020139	NCBP1	89	93.668	ENSETEG00000009705	NCBP1	89	93.668	Echinops_telfairi
ENSCHIG00000020139	NCBP1	100	73.585	ENSEBUG00000008386	NCBP1	100	73.333	Eptatretus_burgeri
ENSCHIG00000020139	NCBP1	100	98.734	ENSEASG00005022795	NCBP1	100	98.734	Equus_asinus_asinus
ENSCHIG00000020139	NCBP1	100	98.861	ENSECAG00000013847	NCBP1	100	98.861	Equus_caballus
ENSCHIG00000020139	NCBP1	95	93.891	ENSEEUG00000015973	NCBP1	99	93.493	Erinaceus_europaeus
ENSCHIG00000020139	NCBP1	99	80.629	ENSELUG00000022519	NCBP1	99	81.384	Esox_lucius
ENSCHIG00000020139	NCBP1	100	99.114	ENSFCAG00000001206	NCBP1	100	99.114	Felis_catus
ENSCHIG00000020139	NCBP1	98	88.931	ENSFALG00000001193	NCBP1	100	89.059	Ficedula_albicollis
ENSCHIG00000020139	NCBP1	100	98.608	ENSFDAG00000010864	NCBP1	100	98.608	Fukomys_damarensis
ENSCHIG00000020139	NCBP1	99	82.390	ENSFHEG00000000655	NCBP1	99	81.887	Fundulus_heteroclitus
ENSCHIG00000020139	NCBP1	99	79.623	ENSGMOG00000008653	NCBP1	99	79.623	Gadus_morhua
ENSCHIG00000020139	NCBP1	98	90.116	ENSGALG00000002087	NCBP1	100	89.786	Gallus_gallus
ENSCHIG00000020139	NCBP1	99	82.890	ENSGAFG00000017787	NCBP1	99	82.763	Gambusia_affinis
ENSCHIG00000020139	NCBP1	99	82.183	ENSGACG00000016772	NCBP1	98	81.807	Gasterosteus_aculeatus
ENSCHIG00000020139	NCBP1	100	88.176	ENSGAGG00000019483	NCBP1	99	89.722	Gopherus_agassizii
ENSCHIG00000020139	NCBP1	100	98.861	ENSGGOG00000001376	NCBP1	100	98.861	Gorilla_gorilla
ENSCHIG00000020139	NCBP1	99	82.872	ENSHBUG00000020843	NCBP1	99	82.494	Haplochromis_burtoni
ENSCHIG00000020139	NCBP1	100	85.985	ENSHGLG00000018112	-	100	85.985	Heterocephalus_glaber_female
ENSCHIG00000020139	NCBP1	100	98.734	ENSHGLG00000001882	NCBP1	100	98.734	Heterocephalus_glaber_female
ENSCHIG00000020139	NCBP1	100	85.732	ENSHGLG00100017373	-	100	85.732	Heterocephalus_glaber_male
ENSCHIG00000020139	NCBP1	100	98.734	ENSHGLG00100013014	NCBP1	100	98.734	Heterocephalus_glaber_male
ENSCHIG00000020139	NCBP1	79	72.381	ENSHCOG00000000204	NCBP1	92	72.381	Hippocampus_comes
ENSCHIG00000020139	NCBP1	99	82.390	ENSIPUG00000007275	ncbp1	99	82.013	Ictalurus_punctatus
ENSCHIG00000020139	NCBP1	100	98.734	ENSSTOG00000002695	NCBP1	100	98.734	Ictidomys_tridecemlineatus
ENSCHIG00000020139	NCBP1	99	82.242	ENSKMAG00000003594	NCBP1	99	86.179	Kryptolebias_marmoratus
ENSCHIG00000020139	NCBP1	99	81.118	ENSLBEG00000011661	NCBP1	99	80.621	Labrus_bergylta
ENSCHIG00000020139	NCBP1	100	79.851	ENSLACG00000013955	NCBP1	100	79.353	Latimeria_chalumnae
ENSCHIG00000020139	NCBP1	99	72.693	ENSLOCG00000009579	NCBP1	99	72.693	Lepisosteus_oculatus
ENSCHIG00000020139	NCBP1	100	98.228	ENSLAFG00000005999	NCBP1	100	98.228	Loxodonta_africana
ENSCHIG00000020139	NCBP1	100	98.861	ENSMFAG00000030994	NCBP1	100	98.861	Macaca_fascicularis
ENSCHIG00000020139	NCBP1	99	98.845	ENSMMUG00000012281	NCBP1	99	98.845	Macaca_mulatta
ENSCHIG00000020139	NCBP1	100	98.861	ENSMNEG00000042790	NCBP1	100	98.861	Macaca_nemestrina
ENSCHIG00000020139	NCBP1	100	98.861	ENSMLEG00000030374	NCBP1	100	98.861	Mandrillus_leucophaeus
ENSCHIG00000020139	NCBP1	99	83.375	ENSMAMG00000014806	NCBP1	99	82.620	Mastacembelus_armatus
ENSCHIG00000020139	NCBP1	97	82.552	ENSMZEG00005009290	-	99	82.422	Maylandia_zebra
ENSCHIG00000020139	NCBP1	99	82.872	ENSMZEG00005003469	NCBP1	99	82.494	Maylandia_zebra
ENSCHIG00000020139	NCBP1	99	97.074	ENSMAUG00000020583	Ncbp1	99	97.074	Mesocricetus_auratus
ENSCHIG00000020139	NCBP1	100	98.481	ENSMICG00000012682	NCBP1	100	98.481	Microcebus_murinus
ENSCHIG00000020139	NCBP1	100	97.342	ENSMOCG00000015818	Ncbp1	100	97.342	Microtus_ochrogaster
ENSCHIG00000020139	NCBP1	91	82.238	ENSMMOG00000002610	NCBP1	99	82.098	Mola_mola
ENSCHIG00000020139	NCBP1	100	93.291	ENSMODG00000003202	NCBP1	99	93.038	Monodelphis_domestica
ENSCHIG00000020139	NCBP1	99	82.494	ENSMALG00000003547	NCBP1	99	81.990	Monopterus_albus
ENSCHIG00000020139	NCBP1	100	97.722	MGP_CAROLIEiJ_G0025982	Ncbp1	100	97.722	Mus_caroli
ENSCHIG00000020139	NCBP1	100	97.722	ENSMUSG00000028330	Ncbp1	100	97.722	Mus_musculus
ENSCHIG00000020139	NCBP1	100	97.848	MGP_PahariEiJ_G0028318	Ncbp1	100	97.848	Mus_pahari
ENSCHIG00000020139	NCBP1	100	97.722	MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	Mus_spretus
ENSCHIG00000020139	NCBP1	100	99.114	ENSMPUG00000006399	NCBP1	100	99.114	Mustela_putorius_furo
ENSCHIG00000020139	NCBP1	99	97.433	ENSMLUG00000015201	NCBP1	100	97.433	Myotis_lucifugus
ENSCHIG00000020139	NCBP1	100	97.722	ENSNGAG00000014101	Ncbp1	100	97.722	Nannospalax_galili
ENSCHIG00000020139	NCBP1	76	85.903	ENSNBRG00000014674	NCBP1	97	85.903	Neolamprologus_brichardi
ENSCHIG00000020139	NCBP1	100	98.861	ENSNLEG00000016909	NCBP1	100	98.861	Nomascus_leucogenys
ENSCHIG00000020139	NCBP1	89	94.144	ENSMEUG00000010672	NCBP1	90	91.892	Notamacropus_eugenii
ENSCHIG00000020139	NCBP1	78	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSCHIG00000020139	NCBP1	100	98.608	ENSODEG00000003232	NCBP1	100	98.608	Octodon_degus
ENSCHIG00000020139	NCBP1	99	82.872	ENSONIG00000001502	NCBP1	99	82.494	Oreochromis_niloticus
ENSCHIG00000020139	NCBP1	79	95.506	ENSOANG00000001918	NCBP1	100	95.506	Ornithorhynchus_anatinus
ENSCHIG00000020139	NCBP1	98	97.943	ENSOCUG00000013853	NCBP1	97	97.943	Oryctolagus_cuniculus
ENSCHIG00000020139	NCBP1	99	81.203	ENSORLG00000011008	NCBP1	99	80.827	Oryzias_latipes
ENSCHIG00000020139	NCBP1	99	81.203	ENSORLG00020017455	NCBP1	99	80.827	Oryzias_latipes_hni
ENSCHIG00000020139	NCBP1	99	81.328	ENSORLG00015012127	NCBP1	99	80.952	Oryzias_latipes_hsok
ENSCHIG00000020139	NCBP1	99	81.830	ENSOMEG00000020698	NCBP1	99	81.704	Oryzias_melastigma
ENSCHIG00000020139	NCBP1	100	98.864	ENSOGAG00000013888	NCBP1	100	98.864	Otolemur_garnettii
ENSCHIG00000020139	NCBP1	100	100.000	ENSOARG00000011233	NCBP1	100	100.000	Ovis_aries
ENSCHIG00000020139	NCBP1	100	98.861	ENSPPAG00000026462	NCBP1	100	98.861	Pan_paniscus
ENSCHIG00000020139	NCBP1	100	99.241	ENSPPRG00000022574	NCBP1	100	99.241	Panthera_pardus
ENSCHIG00000020139	NCBP1	100	99.241	ENSPTIG00000018507	NCBP1	100	99.241	Panthera_tigris_altaica
ENSCHIG00000020139	NCBP1	100	98.861	ENSPTRG00000021167	NCBP1	100	98.861	Pan_troglodytes
ENSCHIG00000020139	NCBP1	100	98.861	ENSPANG00000025591	NCBP1	100	98.861	Papio_anubis
ENSCHIG00000020139	NCBP1	100	81.384	ENSPKIG00000015861	NCBP1	100	81.258	Paramormyrops_kingsleyae
ENSCHIG00000020139	NCBP1	64	88.867	ENSPSIG00000009558	NCBP1	100	89.062	Pelodiscus_sinensis
ENSCHIG00000020139	NCBP1	99	79.723	ENSPMGG00000020476	NCBP1	99	79.219	Periophthalmus_magnuspinnatus
ENSCHIG00000020139	NCBP1	100	97.215	ENSPEMG00000020105	Ncbp1	100	97.215	Peromyscus_maniculatus_bairdii
ENSCHIG00000020139	NCBP1	100	67.621	ENSPMAG00000005533	NCBP1	100	67.621	Petromyzon_marinus
ENSCHIG00000020139	NCBP1	100	93.038	ENSPCIG00000015800	NCBP1	99	94.309	Phascolarctos_cinereus
ENSCHIG00000020139	NCBP1	99	82.206	ENSPFOG00000004158	NCBP1	99	81.830	Poecilia_formosa
ENSCHIG00000020139	NCBP1	99	82.516	ENSPLAG00000020002	NCBP1	99	82.138	Poecilia_latipinna
ENSCHIG00000020139	NCBP1	99	82.642	ENSPMEG00000019821	NCBP1	99	82.264	Poecilia_mexicana
ENSCHIG00000020139	NCBP1	99	82.412	ENSPREG00000006035	NCBP1	99	82.035	Poecilia_reticulata
ENSCHIG00000020139	NCBP1	100	98.861	ENSPPYG00000019426	NCBP1	100	98.861	Pongo_abelii
ENSCHIG00000020139	NCBP1	84	97.931	ENSPCAG00000009943	NCBP1	85	97.931	Procavia_capensis
ENSCHIG00000020139	NCBP1	82	98.984	ENSPCOG00000020024	NCBP1	98	98.984	Propithecus_coquereli
ENSCHIG00000020139	NCBP1	100	98.608	ENSPVAG00000005924	NCBP1	100	98.608	Pteropus_vampyrus
ENSCHIG00000020139	NCBP1	91	82.821	ENSPNYG00000002140	NCBP1	99	82.682	Pundamilia_nyererei
ENSCHIG00000020139	NCBP1	99	82.286	ENSPNAG00000027753	NCBP1	99	81.910	Pygocentrus_nattereri
ENSCHIG00000020139	NCBP1	100	97.722	ENSRNOG00000023605	Ncbp1	100	97.722	Rattus_norvegicus
ENSCHIG00000020139	NCBP1	100	98.861	ENSRBIG00000043175	NCBP1	100	98.861	Rhinopithecus_bieti
ENSCHIG00000020139	NCBP1	100	98.861	ENSRROG00000029767	NCBP1	100	98.861	Rhinopithecus_roxellana
ENSCHIG00000020139	NCBP1	100	98.987	ENSSBOG00000019378	NCBP1	100	98.987	Saimiri_boliviensis_boliviensis
ENSCHIG00000020139	NCBP1	69	94.186	ENSSHAG00000015882	NCBP1	73	93.750	Sarcophilus_harrisii
ENSCHIG00000020139	NCBP1	99	81.772	ENSSFOG00015001872	NCBP1	100	81.013	Scleropages_formosus
ENSCHIG00000020139	NCBP1	99	81.990	ENSSMAG00000007463	NCBP1	99	81.738	Scophthalmus_maximus
ENSCHIG00000020139	NCBP1	99	83.270	ENSSDUG00000007019	NCBP1	100	82.853	Seriola_dumerili
ENSCHIG00000020139	NCBP1	99	82.997	ENSSLDG00000021924	NCBP1	99	82.620	Seriola_lalandi_dorsalis
ENSCHIG00000020139	NCBP1	85	90.175	ENSSARG00000007274	NCBP1	87	90.175	Sorex_araneus
ENSCHIG00000020139	NCBP1	100	81.646	ENSSPUG00000008609	NCBP1	100	81.646	Sphenodon_punctatus
ENSCHIG00000020139	NCBP1	99	83.501	ENSSPAG00000012550	NCBP1	99	83.123	Stegastes_partitus
ENSCHIG00000020139	NCBP1	100	98.987	ENSSSCG00000005366	NCBP1	100	98.987	Sus_scrofa
ENSCHIG00000020139	NCBP1	100	83.396	ENSTGUG00000001472	NCBP1	100	83.522	Taeniopygia_guttata
ENSCHIG00000020139	NCBP1	99	81.990	ENSTRUG00000005287	NCBP1	99	81.612	Takifugu_rubripes
ENSCHIG00000020139	NCBP1	100	95.443	ENSTBEG00000004035	NCBP1	100	95.443	Tupaia_belangeri
ENSCHIG00000020139	NCBP1	88	99.185	ENSTTRG00000000507	NCBP1	88	99.185	Tursiops_truncatus
ENSCHIG00000020139	NCBP1	100	99.114	ENSUAMG00000005471	NCBP1	100	99.114	Ursus_americanus
ENSCHIG00000020139	NCBP1	97	96.749	ENSUMAG00000011865	NCBP1	100	99.122	Ursus_maritimus
ENSCHIG00000020139	NCBP1	100	94.810	ENSVPAG00000010537	NCBP1	100	94.810	Vicugna_pacos
ENSCHIG00000020139	NCBP1	100	99.241	ENSVVUG00000019725	NCBP1	100	99.241	Vulpes_vulpes
ENSCHIG00000020139	NCBP1	100	80.910	ENSXETG00000010179	ncbp1	100	80.910	Xenopus_tropicalis
ENSCHIG00000020139	NCBP1	99	82.642	ENSXMAG00000018253	NCBP1	99	82.264	Xiphophorus_maculatus