EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000020173 (Gene tree)
Gene ID: 102179391
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 98910 bases
Position: chr11:25972492-26071401
Accession: 102179391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022884	PPR	PF01535.20	2.3e-30	1	6
ENSCHIP00000022884	PPR	PF01535.20	2.3e-30	2	6
ENSCHIP00000022884	PPR	PF01535.20	2.3e-30	3	6
ENSCHIP00000022884	PPR	PF01535.20	2.3e-30	4	6
ENSCHIP00000022884	PPR	PF01535.20	2.3e-30	5	6
ENSCHIP00000022884	PPR	PF01535.20	2.3e-30	6	6
ENSCHIP00000022869	PPR	PF01535.20	5.4e-30	1	6
ENSCHIP00000022869	PPR	PF01535.20	5.4e-30	2	6
ENSCHIP00000022869	PPR	PF01535.20	5.4e-30	3	6
ENSCHIP00000022869	PPR	PF01535.20	5.4e-30	4	6
ENSCHIP00000022869	PPR	PF01535.20	5.4e-30	5	6
ENSCHIP00000022869	PPR	PF01535.20	5.4e-30	6	6
ENSCHIP00000022863	PPR	PF01535.20	6.2e-30	1	6
ENSCHIP00000022863	PPR	PF01535.20	6.2e-30	2	6
ENSCHIP00000022863	PPR	PF01535.20	6.2e-30	3	6
ENSCHIP00000022863	PPR	PF01535.20	6.2e-30	4	6
ENSCHIP00000022863	PPR	PF01535.20	6.2e-30	5	6
ENSCHIP00000022863	PPR	PF01535.20	6.2e-30	6	6
ENSCHIP00000022893	PPR	PF01535.20	7e-30	1	6
ENSCHIP00000022893	PPR	PF01535.20	7e-30	2	6
ENSCHIP00000022893	PPR	PF01535.20	7e-30	3	6
ENSCHIP00000022893	PPR	PF01535.20	7e-30	4	6
ENSCHIP00000022893	PPR	PF01535.20	7e-30	5	6
ENSCHIP00000022893	PPR	PF01535.20	7e-30	6	6
ENSCHIP00000022836	PPR	PF01535.20	7.4e-30	1	6
ENSCHIP00000022836	PPR	PF01535.20	7.4e-30	2	6
ENSCHIP00000022836	PPR	PF01535.20	7.4e-30	3	6
ENSCHIP00000022836	PPR	PF01535.20	7.4e-30	4	6
ENSCHIP00000022836	PPR	PF01535.20	7.4e-30	5	6
ENSCHIP00000022836	PPR	PF01535.20	7.4e-30	6	6
ENSCHIP00000022856	PPR	PF01535.20	8.7e-30	1	6
ENSCHIP00000022856	PPR	PF01535.20	8.7e-30	2	6
ENSCHIP00000022856	PPR	PF01535.20	8.7e-30	3	6
ENSCHIP00000022856	PPR	PF01535.20	8.7e-30	4	6
ENSCHIP00000022856	PPR	PF01535.20	8.7e-30	5	6
ENSCHIP00000022856	PPR	PF01535.20	8.7e-30	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000030744	LRPPRC-205	4128	-	ENSCHIP00000022884	1375 (aa)	-	UPI000D19408F
ENSCHIT00000030696	LRPPRC-201	4176	XM_018055178	ENSCHIP00000022836	1391 (aa)	XP_017910667	UPI00084731CE
ENSCHIT00000030729	LRPPRC-204	4077	-	ENSCHIP00000022869	1358 (aa)	-	UPI000D18C470
ENSCHIT00000030753	LRPPRC-206	4155	-	ENSCHIP00000022893	1384 (aa)	-	UPI000D18FAA6
ENSCHIT00000030724	LRPPRC-203	4122	-	ENSCHIP00000022863	1373 (aa)	-	UPI000D18D9D8
ENSCHIT00000030716	LRPPRC-202	4173	-	ENSCHIP00000022856	1390 (aa)	-	UPI000D18C5F8

Gene Model

Click here to download ENSCHIG00000020173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020173	LRPPRC	99	51.971	ENSAPOG00000016610	lrpprc	97	52.009	Acanthochromis_polyacanthus
ENSCHIG00000020173	LRPPRC	99	84.762	ENSAMEG00000005852	LRPPRC	99	84.779	Ailuropoda_melanoleuca
ENSCHIG00000020173	LRPPRC	99	51.111	ENSACIG00000009604	lrpprc	96	51.026	Amphilophus_citrinellus
ENSCHIG00000020173	LRPPRC	99	51.965	ENSAOCG00000005886	lrpprc	97	51.820	Amphiprion_ocellaris
ENSCHIG00000020173	LRPPRC	99	50.331	ENSAPEG00000002937	lrpprc	96	49.856	Amphiprion_percula
ENSCHIG00000020173	LRPPRC	89	60.722	ENSATEG00000010555	lrpprc	96	58.531	Anabas_testudineus
ENSCHIG00000020173	LRPPRC	97	63.138	ENSACAG00000029278	LRPPRC	99	61.853	Anolis_carolinensis
ENSCHIG00000020173	LRPPRC	99	81.662	ENSANAG00000027440	LRPPRC	99	82.197	Aotus_nancymaae
ENSCHIG00000020173	LRPPRC	98	51.223	ENSACLG00000023712	lrpprc	98	51.560	Astatotilapia_calliptera
ENSCHIG00000020173	LRPPRC	99	80.946	ENSCJAG00000000794	LRPPRC	99	81.017	Callithrix_jacchus
ENSCHIG00000020173	LRPPRC	98	62.122	ENSCAPG00000013631	LRPPRC	99	62.279	Cavia_aperea
ENSCHIG00000020173	LRPPRC	87	80.897	ENSCPOG00000000204	LRPPRC	99	80.897	Cavia_porcellus
ENSCHIG00000020173	LRPPRC	99	81.120	ENSCCAG00000031900	LRPPRC	99	81.250	Cebus_capucinus
ENSCHIG00000020173	LRPPRC	99	81.304	ENSCATG00000014187	LRPPRC	99	82.386	Cercocebus_atys
ENSCHIG00000020173	LRPPRC	99	80.372	ENSCLAG00000005203	LRPPRC	99	80.372	Chinchilla_lanigera
ENSCHIG00000020173	LRPPRC	99	82.020	ENSCSAG00000013233	LRPPRC	99	82.020	Chlorocebus_sabaeus
ENSCHIG00000020173	LRPPRC	85	83.444	ENSCHOG00000003631	LRPPRC	84	83.444	Choloepus_hoffmanni
ENSCHIG00000020173	LRPPRC	98	79.151	ENSCANG00000034961	LRPPRC	99	84.615	Colobus_angolensis_palliatus
ENSCHIG00000020173	LRPPRC	99	78.520	ENSCGRG00001016261	Lrpprc	99	78.520	Cricetulus_griseus_chok1gshd
ENSCHIG00000020173	LRPPRC	99	78.520	ENSCGRG00000004072	Lrpprc	99	78.520	Cricetulus_griseus_crigri
ENSCHIG00000020173	LRPPRC	99	41.888	ENSCSEG00000003850	lrpprc	96	49.109	Cynoglossus_semilaevis
ENSCHIG00000020173	LRPPRC	99	51.022	ENSCVAG00000012967	lrpprc	97	51.334	Cyprinodon_variegatus
ENSCHIG00000020173	LRPPRC	99	49.128	ENSDARG00000043970	lrpprc	96	49.325	Danio_rerio
ENSCHIG00000020173	LRPPRC	82	61.646	ENSDNOG00000032336	-	100	61.646	Dasypus_novemcinctus
ENSCHIG00000020173	LRPPRC	99	82.315	ENSDNOG00000012594	-	99	82.315	Dasypus_novemcinctus
ENSCHIG00000020173	LRPPRC	99	82.915	ENSDORG00000012233	Lrpprc	99	82.915	Dipodomys_ordii
ENSCHIG00000020173	LRPPRC	100	81.304	ENSETEG00000006657	LRPPRC	100	81.304	Echinops_telfairi
ENSCHIG00000020173	LRPPRC	87	68.273	ENSEEUG00000012340	LRPPRC	93	68.273	Erinaceus_europaeus
ENSCHIG00000020173	LRPPRC	99	50.702	ENSELUG00000012803	lrpprc	98	51.442	Esox_lucius
ENSCHIG00000020173	LRPPRC	99	87.132	ENSFCAG00000013468	LRPPRC	99	87.132	Felis_catus
ENSCHIG00000020173	LRPPRC	98	55.843	ENSFALG00000012738	LRPPRC	99	56.644	Ficedula_albicollis
ENSCHIG00000020173	LRPPRC	99	78.612	ENSFDAG00000015328	LRPPRC	99	78.612	Fukomys_damarensis
ENSCHIG00000020173	LRPPRC	99	50.669	ENSFHEG00000019604	lrpprc	97	50.972	Fundulus_heteroclitus
ENSCHIG00000020173	LRPPRC	99	49.892	ENSGMOG00000008337	lrpprc	97	50.593	Gadus_morhua
ENSCHIG00000020173	LRPPRC	99	51.654	ENSGAFG00000001455	lrpprc	98	51.977	Gambusia_affinis
ENSCHIG00000020173	LRPPRC	99	51.067	ENSGACG00000010679	lrpprc	99	51.627	Gasterosteus_aculeatus
ENSCHIG00000020173	LRPPRC	99	51.787	ENSHBUG00000000393	lrpprc	95	52.296	Haplochromis_burtoni
ENSCHIG00000020173	LRPPRC	99	80.143	ENSHGLG00000006123	LRPPRC	99	80.143	Heterocephalus_glaber_female
ENSCHIG00000020173	LRPPRC	61	80.288	ENSHGLG00100005960	-	99	80.700	Heterocephalus_glaber_male
ENSCHIG00000020173	LRPPRC	99	50.501	ENSHCOG00000002107	lrpprc	96	51.502	Hippocampus_comes
ENSCHIG00000020173	LRPPRC	99	51.676	ENSIPUG00000009406	lrpprc	96	52.439	Ictalurus_punctatus
ENSCHIG00000020173	LRPPRC	99	85.151	ENSSTOG00000011185	LRPPRC	99	85.151	Ictidomys_tridecemlineatus
ENSCHIG00000020173	LRPPRC	99	81.753	ENSJJAG00000020475	Lrpprc	99	81.753	Jaculus_jaculus
ENSCHIG00000020173	LRPPRC	98	48.220	ENSKMAG00000003287	lrpprc	84	47.664	Kryptolebias_marmoratus
ENSCHIG00000020173	LRPPRC	99	47.829	ENSLBEG00000023225	lrpprc	98	51.423	Labrus_bergylta
ENSCHIG00000020173	LRPPRC	99	60.809	ENSLACG00000014030	LRPPRC	98	61.330	Latimeria_chalumnae
ENSCHIG00000020173	LRPPRC	98	59.533	ENSLOCG00000016390	lrpprc	93	59.533	Lepisosteus_oculatus
ENSCHIG00000020173	LRPPRC	100	76.681	ENSLAFG00000008614	LRPPRC	100	76.681	Loxodonta_africana
ENSCHIG00000020173	LRPPRC	99	81.232	ENSMFAG00000041560	LRPPRC	99	84.234	Macaca_fascicularis
ENSCHIG00000020173	LRPPRC	99	79.656	ENSMMUG00000019841	LRPPRC	99	83.784	Macaca_mulatta
ENSCHIG00000020173	LRPPRC	99	81.447	ENSMNEG00000031613	LRPPRC	99	82.765	Macaca_nemestrina
ENSCHIG00000020173	LRPPRC	98	47.977	ENSMAMG00000021835	lrpprc	88	59.417	Mastacembelus_armatus
ENSCHIG00000020173	LRPPRC	99	51.997	ENSMZEG00005027379	lrpprc	97	52.511	Maylandia_zebra
ENSCHIG00000020173	LRPPRC	99	78.305	ENSMAUG00000012118	Lrpprc	99	78.305	Mesocricetus_auratus
ENSCHIG00000020173	LRPPRC	100	84.026	ENSMICG00000010486	LRPPRC	100	84.026	Microcebus_murinus
ENSCHIG00000020173	LRPPRC	99	80.532	ENSMOCG00000006048	Lrpprc	99	80.532	Microtus_ochrogaster
ENSCHIG00000020173	LRPPRC	99	51.166	ENSMMOG00000007830	lrpprc	93	56.238	Mola_mola
ENSCHIG00000020173	LRPPRC	97	69.414	ENSMODG00000000648	LRPPRC	99	69.414	Monodelphis_domestica
ENSCHIG00000020173	LRPPRC	99	50.514	ENSMALG00000001271	lrpprc	97	50.789	Monopterus_albus
ENSCHIG00000020173	LRPPRC	99	86.975	ENSMPUG00000011800	LRPPRC	99	86.975	Mustela_putorius_furo
ENSCHIG00000020173	LRPPRC	100	86.308	ENSMLUG00000010575	LRPPRC	100	86.308	Myotis_lucifugus
ENSCHIG00000020173	LRPPRC	99	80.115	ENSNGAG00000013069	Lrpprc	99	80.115	Nannospalax_galili
ENSCHIG00000020173	LRPPRC	90	58.294	ENSNBRG00000013202	lrpprc	99	58.294	Neolamprologus_brichardi
ENSCHIG00000020173	LRPPRC	99	79.310	ENSNLEG00000016782	LRPPRC	99	81.818	Nomascus_leucogenys
ENSCHIG00000020173	LRPPRC	89	81.538	ENSOPRG00000016774	LRPPRC	89	81.538	Ochotona_princeps
ENSCHIG00000020173	LRPPRC	99	81.452	ENSODEG00000011211	LRPPRC	99	81.452	Octodon_degus
ENSCHIG00000020173	LRPPRC	99	52.180	ENSONIG00000000917	lrpprc	98	52.171	Oreochromis_niloticus
ENSCHIG00000020173	LRPPRC	76	62.252	ENSOANG00000014670	-	98	63.612	Ornithorhynchus_anatinus
ENSCHIG00000020173	LRPPRC	100	83.943	ENSOCUG00000015046	LRPPRC	96	83.943	Oryctolagus_cuniculus
ENSCHIG00000020173	LRPPRC	98	51.599	ENSORLG00000004605	lrpprc	99	49.633	Oryzias_latipes
ENSCHIG00000020173	LRPPRC	94	53.519	ENSORLG00020012536	lrpprc	99	52.941	Oryzias_latipes_hni
ENSCHIG00000020173	LRPPRC	99	50.141	ENSORLG00015018270	lrpprc	96	58.837	Oryzias_latipes_hsok
ENSCHIG00000020173	LRPPRC	99	81.694	ENSOGAG00000012798	LRPPRC	99	81.694	Otolemur_garnettii
ENSCHIG00000020173	LRPPRC	100	98.711	ENSOARG00000006522	LRPPRC	100	98.711	Ovis_aries
ENSCHIG00000020173	LRPPRC	99	77.434	ENSPPAG00000040876	LRPPRC	99	79.434	Pan_paniscus
ENSCHIG00000020173	LRPPRC	99	86.700	ENSPPRG00000006578	LRPPRC	99	86.700	Panthera_pardus
ENSCHIG00000020173	LRPPRC	98	86.953	ENSPTIG00000000933	LRPPRC	97	87.324	Panthera_tigris_altaica
ENSCHIG00000020173	LRPPRC	99	79.741	ENSPTRG00000011880	LRPPRC	99	80.492	Pan_troglodytes
ENSCHIG00000020173	LRPPRC	99	81.232	ENSPANG00000020731	LRPPRC	99	82.386	Papio_anubis
ENSCHIG00000020173	LRPPRC	92	57.399	ENSPKIG00000022232	lrpprc	98	57.399	Paramormyrops_kingsleyae
ENSCHIG00000020173	LRPPRC	62	64.767	ENSPSIG00000006830	-	98	65.146	Pelodiscus_sinensis
ENSCHIG00000020173	LRPPRC	68	46.154	ENSPMGG00000016597	lrpprc	96	46.154	Periophthalmus_magnuspinnatus
ENSCHIG00000020173	LRPPRC	96	45.213	ENSPMAG00000002147	lrpprc	99	45.890	Petromyzon_marinus
ENSCHIG00000020173	LRPPRC	99	50.600	ENSPFOG00000011227	lrpprc	98	50.901	Poecilia_formosa
ENSCHIG00000020173	LRPPRC	99	50.318	ENSPLAG00000004018	lrpprc	98	50.613	Poecilia_latipinna
ENSCHIG00000020173	LRPPRC	99	50.812	ENSPMEG00000016425	lrpprc	98	51.118	Poecilia_mexicana
ENSCHIG00000020173	LRPPRC	99	50.923	ENSPREG00000003662	lrpprc	98	51.225	Poecilia_reticulata
ENSCHIG00000020173	LRPPRC	59	78.803	ENSPPYG00000029532	-	99	78.875	Pongo_abelii
ENSCHIG00000020173	LRPPRC	84	78.929	ENSPCAG00000001430	LRPPRC	84	78.929	Procavia_capensis
ENSCHIG00000020173	LRPPRC	100	84.014	ENSPVAG00000002007	LRPPRC	100	84.014	Pteropus_vampyrus
ENSCHIG00000020173	LRPPRC	99	49.643	ENSPNYG00000000756	lrpprc	99	49.643	Pundamilia_nyererei
ENSCHIG00000020173	LRPPRC	99	54.932	ENSPNAG00000002895	lrpprc	97	54.578	Pygocentrus_nattereri
ENSCHIG00000020173	LRPPRC	99	78.592	ENSRNOG00000005877	Lrpprc	99	78.736	Rattus_norvegicus
ENSCHIG00000020173	LRPPRC	99	79.473	ENSRBIG00000031552	LRPPRC	99	79.473	Rhinopithecus_bieti
ENSCHIG00000020173	LRPPRC	99	80.689	ENSSBOG00000011807	LRPPRC	99	81.250	Saimiri_boliviensis_boliviensis
ENSCHIG00000020173	LRPPRC	98	67.407	ENSSHAG00000018725	LRPPRC	100	67.407	Sarcophilus_harrisii
ENSCHIG00000020173	LRPPRC	99	51.534	ENSSFOG00015001042	lrpprc	99	51.534	Scleropages_formosus
ENSCHIG00000020173	LRPPRC	99	51.933	ENSSDUG00000019062	lrpprc	97	52.261	Seriola_dumerili
ENSCHIG00000020173	LRPPRC	99	45.624	ENSSLDG00000023028	lrpprc	99	45.657	Seriola_lalandi_dorsalis
ENSCHIG00000020173	LRPPRC	89	81.053	ENSSARG00000000426	LRPPRC	95	81.053	Sorex_araneus
ENSCHIG00000020173	LRPPRC	99	48.387	ENSSPAG00000000162	lrpprc	97	48.373	Stegastes_partitus
ENSCHIG00000020173	LRPPRC	100	89.455	ENSSSCG00000008452	LRPPRC	100	89.455	Sus_scrofa
ENSCHIG00000020173	LRPPRC	96	55.530	ENSTGUG00000003759	LRPPRC	99	56.222	Taeniopygia_guttata
ENSCHIG00000020173	LRPPRC	99	51.843	ENSTRUG00000008409	lrpprc	94	52.201	Takifugu_rubripes
ENSCHIG00000020173	LRPPRC	99	51.058	ENSTNIG00000007470	lrpprc	99	51.808	Tetraodon_nigroviridis
ENSCHIG00000020173	LRPPRC	100	87.374	ENSTTRG00000006403	LRPPRC	100	87.374	Tursiops_truncatus
ENSCHIG00000020173	LRPPRC	98	82.725	ENSVPAG00000008993	LRPPRC	96	86.396	Vicugna_pacos
ENSCHIG00000020173	LRPPRC	99	59.773	ENSXETG00000009296	lrpprc	99	60.274	Xenopus_tropicalis
ENSCHIG00000020173	LRPPRC	97	48.954	ENSXCOG00000013343	lrpprc	95	52.485	Xiphophorus_couchianus
ENSCHIG00000020173	LRPPRC	99	51.372	ENSXMAG00000018108	lrpprc	95	52.706	Xiphophorus_maculatus