EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000020203 (Gene tree)
Gene ID: 102171642
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 20640 bases
Position: chr17:1181480-1202119
Accession: 102171642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022116	zf-C2H2	PF00096.26	1.3e-26	1	5
ENSCHIP00000022116	zf-C2H2	PF00096.26	1.3e-26	2	5
ENSCHIP00000022116	zf-C2H2	PF00096.26	1.3e-26	3	5
ENSCHIP00000022116	zf-C2H2	PF00096.26	1.3e-26	4	5
ENSCHIP00000022116	zf-C2H2	PF00096.26	1.3e-26	5	5
ENSCHIP00000022105	zf-C2H2	PF00096.26	2.5e-20	1	4
ENSCHIP00000022105	zf-C2H2	PF00096.26	2.5e-20	2	4
ENSCHIP00000022105	zf-C2H2	PF00096.26	2.5e-20	3	4
ENSCHIP00000022105	zf-C2H2	PF00096.26	2.5e-20	4	4
ENSCHIP00000022116	zf-met	PF12874.7	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000029975	PATZ1-202	2064	XM_018060945	ENSCHIP00000022116	687 (aa)	XP_017916434	UPI0005FB4EB9
ENSCHIT00000029964	PATZ1-201	6291	XM_018060946	ENSCHIP00000022105	641 (aa)	XP_017916435	UPI0005FB2A1C
ENSCHIT00000029978	PATZ1-203	5469	-	ENSCHIP00000022119	160 (aa)	-	UPI000D190549

Gene Model

Click here to download ENSCHIG00000020203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000020203	PATZ1	88	32.618	ENSCHIG00000019466	MYNN	85	36.145
ENSCHIG00000020203	PATZ1	51	31.304	ENSCHIG00000009605	ZNF574	50	33.333
ENSCHIG00000020203	PATZ1	75	30.120	ENSCHIG00000020006	-	68	30.120
ENSCHIG00000020203	PATZ1	50	34.899	ENSCHIG00000027113	ZNF699	77	30.347
ENSCHIG00000020203	PATZ1	70	31.535	ENSCHIG00000011632	ZBTB41	56	31.535
ENSCHIG00000020203	PATZ1	76	31.288	ENSCHIG00000025748	ZBTB47	56	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020203	PATZ1	100	98.752	ENSG00000100105	PATZ1	100	98.752	Homo_sapiens
ENSCHIG00000020203	PATZ1	99	59.847	ENSAPOG00000018447	patz1	100	59.240	Acanthochromis_polyacanthus
ENSCHIG00000020203	PATZ1	100	99.272	ENSAMEG00000007074	PATZ1	100	99.272	Ailuropoda_melanoleuca
ENSCHIG00000020203	PATZ1	100	60.232	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSCHIG00000020203	PATZ1	100	57.563	ENSAPEG00000013354	patz1	100	57.703	Amphiprion_percula
ENSCHIG00000020203	PATZ1	100	62.353	ENSATEG00000011260	patz1	100	62.157	Anabas_testudineus
ENSCHIG00000020203	PATZ1	85	91.438	ENSAPLG00000003934	PATZ1	99	90.411	Anas_platyrhynchos
ENSCHIG00000020203	PATZ1	100	98.752	ENSANAG00000029603	PATZ1	100	98.752	Aotus_nancymaae
ENSCHIG00000020203	PATZ1	97	62.335	ENSAMXG00000002273	patz1	98	62.335	Astyanax_mexicanus
ENSCHIG00000020203	PATZ1	100	99.563	ENSBTAG00000005478	PATZ1	100	99.563	Bos_taurus
ENSCHIG00000020203	PATZ1	100	98.752	ENSCJAG00000010978	PATZ1	100	98.752	Callithrix_jacchus
ENSCHIG00000020203	PATZ1	100	99.418	ENSCAFG00000013087	PATZ1	100	99.418	Canis_familiaris
ENSCHIG00000020203	PATZ1	100	98.690	ENSTSYG00000033183	PATZ1	100	98.690	Carlito_syrichta
ENSCHIG00000020203	PATZ1	100	98.752	ENSCCAG00000028772	PATZ1	100	98.752	Cebus_capucinus
ENSCHIG00000020203	PATZ1	100	98.752	ENSCATG00000006101	PATZ1	100	98.752	Cercocebus_atys
ENSCHIG00000020203	PATZ1	100	88.841	ENSCPBG00000011277	PATZ1	100	88.116	Chrysemys_picta_bellii
ENSCHIG00000020203	PATZ1	100	98.752	ENSCANG00000024972	PATZ1	100	98.752	Colobus_angolensis_palliatus
ENSCHIG00000020203	PATZ1	100	96.507	ENSCGRG00001004071	Patz1	100	96.507	Cricetulus_griseus_chok1gshd
ENSCHIG00000020203	PATZ1	93	97.201	ENSCGRG00000004814	Patz1	100	97.201	Cricetulus_griseus_crigri
ENSCHIG00000020203	PATZ1	100	55.245	ENSCSEG00000001385	patz1	100	55.139	Cynoglossus_semilaevis
ENSCHIG00000020203	PATZ1	100	58.997	ENSCVAG00000007684	patz1	100	58.789	Cyprinodon_variegatus
ENSCHIG00000020203	PATZ1	97	60.679	ENSDARG00000076584	patz1	98	58.815	Danio_rerio
ENSCHIG00000020203	PATZ1	90	99.192	ENSDNOG00000003183	PATZ1	100	99.192	Dasypus_novemcinctus
ENSCHIG00000020203	PATZ1	100	99.127	ENSDORG00000023834	Patz1	100	99.127	Dipodomys_ordii
ENSCHIG00000020203	PATZ1	100	98.981	ENSECAG00000025030	PATZ1	100	98.981	Equus_caballus
ENSCHIG00000020203	PATZ1	99	62.075	ENSELUG00000002333	patz1	100	60.139	Esox_lucius
ENSCHIG00000020203	PATZ1	100	99.418	ENSFCAG00000030253	PATZ1	100	99.418	Felis_catus
ENSCHIG00000020203	PATZ1	86	91.525	ENSFALG00000007450	PATZ1	99	90.630	Ficedula_albicollis
ENSCHIG00000020203	PATZ1	96	94.872	ENSFDAG00000005614	PATZ1	100	94.268	Fukomys_damarensis
ENSCHIG00000020203	PATZ1	100	57.478	ENSFHEG00000014755	patz1	100	57.478	Fundulus_heteroclitus
ENSCHIG00000020203	PATZ1	98	55.230	ENSGMOG00000001062	patz1	100	54.434	Gadus_morhua
ENSCHIG00000020203	PATZ1	100	88.489	ENSGALG00000006934	PATZ1	100	87.626	Gallus_gallus
ENSCHIG00000020203	PATZ1	100	58.721	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSCHIG00000020203	PATZ1	85	91.595	ENSGAGG00000003214	PATZ1	100	90.566	Gopherus_agassizii
ENSCHIG00000020203	PATZ1	100	98.908	ENSGGOG00000017171	PATZ1	100	98.908	Gorilla_gorilla
ENSCHIG00000020203	PATZ1	98	62.846	ENSHCOG00000017644	patz1	98	61.388	Hippocampus_comes
ENSCHIG00000020203	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	59.878	Ictalurus_punctatus
ENSCHIG00000020203	PATZ1	100	99.064	ENSSTOG00000020707	PATZ1	100	99.064	Ictidomys_tridecemlineatus
ENSCHIG00000020203	PATZ1	100	96.517	ENSJJAG00000015259	Patz1	100	96.517	Jaculus_jaculus
ENSCHIG00000020203	PATZ1	100	57.670	ENSKMAG00000008157	patz1	100	57.627	Kryptolebias_marmoratus
ENSCHIG00000020203	PATZ1	100	98.690	ENSLAFG00000002317	PATZ1	100	98.690	Loxodonta_africana
ENSCHIG00000020203	PATZ1	100	98.596	ENSMFAG00000040968	PATZ1	100	98.596	Macaca_fascicularis
ENSCHIG00000020203	PATZ1	100	98.596	ENSMNEG00000037588	PATZ1	100	98.596	Macaca_nemestrina
ENSCHIG00000020203	PATZ1	100	98.752	ENSMLEG00000030938	PATZ1	100	98.752	Mandrillus_leucophaeus
ENSCHIG00000020203	PATZ1	100	57.771	ENSMAMG00000023652	patz1	100	57.918	Mastacembelus_armatus
ENSCHIG00000020203	PATZ1	85	87.692	ENSMGAG00000008439	PATZ1	100	86.667	Meleagris_gallopavo
ENSCHIG00000020203	PATZ1	100	98.284	ENSMAUG00000004129	Patz1	100	98.284	Mesocricetus_auratus
ENSCHIG00000020203	PATZ1	100	98.981	ENSMICG00000005430	PATZ1	100	98.981	Microcebus_murinus
ENSCHIG00000020203	PATZ1	100	98.128	ENSMOCG00000014488	Patz1	100	98.128	Microtus_ochrogaster
ENSCHIG00000020203	PATZ1	100	55.078	ENSMMOG00000021679	patz1	100	54.883	Mola_mola
ENSCHIG00000020203	PATZ1	100	57.143	ENSMALG00000021172	patz1	100	56.719	Monopterus_albus
ENSCHIG00000020203	PATZ1	100	98.128	MGP_CAROLIEiJ_G0016007	Patz1	100	98.128	Mus_caroli
ENSCHIG00000020203	PATZ1	100	98.284	ENSMUSG00000020453	Patz1	100	98.284	Mus_musculus
ENSCHIG00000020203	PATZ1	100	98.284	MGP_PahariEiJ_G0016884	Patz1	100	98.284	Mus_pahari
ENSCHIG00000020203	PATZ1	100	98.284	MGP_SPRETEiJ_G0016846	Patz1	100	98.284	Mus_spretus
ENSCHIG00000020203	PATZ1	100	99.127	ENSMLUG00000009942	PATZ1	100	99.127	Myotis_lucifugus
ENSCHIG00000020203	PATZ1	100	98.596	ENSNGAG00000010268	Patz1	100	98.596	Nannospalax_galili
ENSCHIG00000020203	PATZ1	100	60.039	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSCHIG00000020203	PATZ1	68	93.548	ENSMEUG00000016293	PATZ1	99	93.534	Notamacropus_eugenii
ENSCHIG00000020203	PATZ1	100	98.253	ENSODEG00000003589	PATZ1	100	98.253	Octodon_degus
ENSCHIG00000020203	PATZ1	100	58.772	ENSONIG00000004248	patz1	100	58.565	Oreochromis_niloticus
ENSCHIG00000020203	PATZ1	100	93.033	ENSOANG00000014654	PATZ1	100	93.324	Ornithorhynchus_anatinus
ENSCHIG00000020203	PATZ1	100	58.626	ENSORLG00020010937	patz1	100	58.473	Oryzias_latipes_hni
ENSCHIG00000020203	PATZ1	100	58.003	ENSORLG00015007396	patz1	100	57.856	Oryzias_latipes_hsok
ENSCHIG00000020203	PATZ1	100	60.792	ENSOMEG00000006636	patz1	100	57.607	Oryzias_melastigma
ENSCHIG00000020203	PATZ1	100	98.836	ENSOGAG00000027905	PATZ1	100	98.836	Otolemur_garnettii
ENSCHIG00000020203	PATZ1	100	98.908	ENSPPAG00000033227	PATZ1	100	98.908	Pan_paniscus
ENSCHIG00000020203	PATZ1	100	99.418	ENSPPRG00000001573	PATZ1	100	99.418	Panthera_pardus
ENSCHIG00000020203	PATZ1	86	99.494	ENSPTIG00000007937	PATZ1	91	99.494	Panthera_tigris_altaica
ENSCHIG00000020203	PATZ1	100	98.908	ENSPTRG00000014268	PATZ1	100	98.908	Pan_troglodytes
ENSCHIG00000020203	PATZ1	100	98.752	ENSPANG00000006821	PATZ1	100	98.690	Papio_anubis
ENSCHIG00000020203	PATZ1	100	62.313	ENSPKIG00000019584	patz1	100	61.754	Paramormyrops_kingsleyae
ENSCHIG00000020203	PATZ1	58	95.202	ENSPSIG00000011562	-	100	95.429	Pelodiscus_sinensis
ENSCHIG00000020203	PATZ1	60	83.051	ENSPSIG00000016553	-	91	82.324	Pelodiscus_sinensis
ENSCHIG00000020203	PATZ1	100	57.022	ENSPMGG00000010196	patz1	100	57.022	Periophthalmus_magnuspinnatus
ENSCHIG00000020203	PATZ1	100	98.284	ENSPEMG00000005321	Patz1	100	98.284	Peromyscus_maniculatus_bairdii
ENSCHIG00000020203	PATZ1	100	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSCHIG00000020203	PATZ1	100	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSCHIG00000020203	PATZ1	100	56.906	ENSPREG00000002440	patz1	100	57.044	Poecilia_reticulata
ENSCHIG00000020203	PATZ1	100	98.544	ENSPPYG00000011732	PATZ1	100	98.544	Pongo_abelii
ENSCHIG00000020203	PATZ1	100	98.836	ENSPCOG00000019729	PATZ1	100	98.836	Propithecus_coquereli
ENSCHIG00000020203	PATZ1	100	99.272	ENSPVAG00000001749	PATZ1	100	99.272	Pteropus_vampyrus
ENSCHIG00000020203	PATZ1	100	59.244	ENSPNYG00000013542	patz1	100	59.046	Pundamilia_nyererei
ENSCHIG00000020203	PATZ1	84	60.130	ENSPNAG00000017222	patz1	99	58.439	Pygocentrus_nattereri
ENSCHIG00000020203	PATZ1	100	98.752	ENSRBIG00000044231	PATZ1	100	98.752	Rhinopithecus_bieti
ENSCHIG00000020203	PATZ1	100	98.752	ENSRROG00000037155	PATZ1	100	98.752	Rhinopithecus_roxellana
ENSCHIG00000020203	PATZ1	100	98.752	ENSSBOG00000003894	PATZ1	100	98.752	Saimiri_boliviensis_boliviensis
ENSCHIG00000020203	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSCHIG00000020203	PATZ1	100	86.629	ENSSPUG00000015298	PATZ1	100	85.775	Sphenodon_punctatus
ENSCHIG00000020203	PATZ1	85	98.969	ENSSSCG00000010027	PATZ1	100	98.969	Sus_scrofa
ENSCHIG00000020203	PATZ1	100	57.931	ENSTRUG00000015366	patz1	100	59.417	Takifugu_rubripes
ENSCHIG00000020203	PATZ1	100	99.272	ENSTTRG00000010279	PATZ1	100	99.272	Tursiops_truncatus
ENSCHIG00000020203	PATZ1	100	99.376	ENSUAMG00000015014	PATZ1	100	99.376	Ursus_americanus
ENSCHIG00000020203	PATZ1	100	72.899	ENSXETG00000004190	patz1	100	72.464	Xenopus_tropicalis
ENSCHIG00000020203	PATZ1	100	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus