EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCHIG00000020351 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Minus strand
Length: 1787 bases
Position: chr21:25393063-25394849
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022338	RRM_1	PF00076.22	3.9e-26	1	2
ENSCHIP00000022338	RRM_1	PF00076.22	3.9e-26	2	2
ENSCHIP00000022338	HnRNPA1	PF11627.8	9.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000030198	-	903	-	ENSCHIP00000022338	300 (aa)	-	UPI000D196247

Gene Model

Click here to download ENSCHIG00000020351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCHIG00000020351	-	67	52.193	ENSCHIG00000008431	-	69	61.364
ENSCHIG00000020351	-	91	63.366	ENSCHIG00000017826	-	85	64.846
ENSCHIG00000020351	-	93	88.356	ENSCHIG00000011858	-	87	88.129
ENSCHIG00000020351	-	86	66.912	ENSCHIG00000015430	-	58	77.596
ENSCHIG00000020351	-	60	57.143	ENSCHIG00000011000	-	51	58.201
ENSCHIG00000020351	-	92	87.633	ENSCHIG00000020945	-	86	87.037
ENSCHIG00000020351	-	93	89.041	ENSCHIG00000025214	-	87	88.849
ENSCHIG00000020351	-	59	60.209	ENSCHIG00000015823	-	53	62.011
ENSCHIG00000020351	-	60	56.186	ENSCHIG00000026095	-	54	58.564
ENSCHIG00000020351	-	93	87.671	ENSCHIG00000008322	-	87	87.410
ENSCHIG00000020351	-	61	65.217	ENSCHIG00000011332	-	66	66.082
ENSCHIG00000020351	-	55	52.809	ENSCHIG00000002602	HNRNPA0	60	52.486
ENSCHIG00000020351	-	73	62.121	ENSCHIG00000025404	-	53	73.737
ENSCHIG00000020351	-	71	39.655	ENSCHIG00000022317	HNRNPD	58	40.860
ENSCHIG00000020351	-	55	36.628	ENSCHIG00000021687	HNRNPAB	58	36.628
ENSCHIG00000020351	-	59	51.295	ENSCHIG00000011148	-	52	53.039
ENSCHIG00000020351	-	60	80.829	ENSCHIG00000015099	-	82	81.183

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020351	-	88	65.950	ENSAMEG00000002186	-	66	65.217	Ailuropoda_melanoleuca
ENSCHIG00000020351	-	93	79.795	ENSCAFG00000017180	-	87	79.496	Canis_familiaris
ENSCHIG00000020351	-	88	82.310	ENSCAFG00000006327	-	86	82.014	Canis_familiaris
ENSCHIG00000020351	-	90	66.901	ENSDNOG00000048335	-	88	66.426	Dasypus_novemcinctus
ENSCHIG00000020351	-	93	59.140	ENSDNOG00000030945	-	97	55.184	Dasypus_novemcinctus
ENSCHIG00000020351	-	93	89.041	ENSDORG00000027821	-	87	88.849	Dipodomys_ordii
ENSCHIG00000020351	-	65	59.459	ENSETEG00000010244	-	85	42.238	Echinops_telfairi
ENSCHIG00000020351	-	65	58.128	ENSETEG00000004129	-	66	59.322	Echinops_telfairi
ENSCHIG00000020351	-	92	88.316	ENSFDAG00000021342	-	87	87.770	Fukomys_damarensis
ENSCHIG00000020351	-	92	88.316	ENSHGLG00000003139	HNRNPA1	87	87.770	Heterocephalus_glaber_female
ENSCHIG00000020351	-	85	74.060	ENSHGLG00100017719	-	87	73.256	Heterocephalus_glaber_male
ENSCHIG00000020351	-	92	88.316	ENSHGLG00100015974	HNRNPA1	87	87.770	Heterocephalus_glaber_male
ENSCHIG00000020351	-	79	75.207	ENSSTOG00000034519	-	73	74.561	Ictidomys_tridecemlineatus
ENSCHIG00000020351	-	78	70.492	ENSMPUG00000008269	-	69	72.472	Mustela_putorius_furo
ENSCHIG00000020351	-	95	68.276	ENSPTIG00000013949	-	88	70.677	Panthera_tigris_altaica
ENSCHIG00000020351	-	67	82.081	ENSPANG00000017095	-	87	83.186	Papio_anubis
ENSCHIG00000020351	-	89	83.333	ENSTBEG00000012511	-	97	82.734	Tupaia_belangeri