EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCHIG00000020361 (Gene tree)
Gene ID: 102169929
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Capra_hircus
Status: putative
Strand: Plus strand
Length: 27626 bases
Position: chr3:80657356-80684981
Accession: 102169929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCHIP00000022455	RRM_1	PF00076.22	2.4e-17	1	2
ENSCHIP00000022455	RRM_1	PF00076.22	2.4e-17	2	2
ENSCHIP00000022467	RRM_1	PF00076.22	2.4e-17	1	2
ENSCHIP00000022467	RRM_1	PF00076.22	2.4e-17	2	2
ENSCHIP00000022486	RRM_1	PF00076.22	3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCHIT00000030327	RNPC3-202	3120	XM_005678021	ENSCHIP00000022467	517 (aa)	XP_005678078	UPI0003AF7542
ENSCHIT00000030315	RNPC3-201	4094	-	ENSCHIP00000022455	517 (aa)	-	UPI0003AF7542
ENSCHIT00000030345	RNPC3-203	1545	-	ENSCHIP00000022486	514 (aa)	-	UPI000D190278

Gene Model

Click here to download ENSCHIG00000020361's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCHIG00000020361's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCHIG00000020361	RNPC3	100	93.424	ENSG00000185946	RNPC3	100	93.514	Homo_sapiens
ENSCHIG00000020361	RNPC3	95	56.855	ENSAPOG00000017371	rnpc3	97	57.344	Acanthochromis_polyacanthus
ENSCHIG00000020361	RNPC3	98	93.713	ENSAMEG00000001694	RNPC3	100	92.885	Ailuropoda_melanoleuca
ENSCHIG00000020361	RNPC3	95	53.200	ENSACIG00000021043	rnpc3	97	52.871	Amphilophus_citrinellus
ENSCHIG00000020361	RNPC3	95	56.088	ENSAOCG00000014052	rnpc3	95	56.574	Amphiprion_ocellaris
ENSCHIG00000020361	RNPC3	95	56.088	ENSAPEG00000008739	rnpc3	95	56.574	Amphiprion_percula
ENSCHIG00000020361	RNPC3	95	54.691	ENSATEG00000021263	rnpc3	97	54.743	Anabas_testudineus
ENSCHIG00000020361	RNPC3	87	69.163	ENSAPLG00000015605	RNPC3	99	70.044	Anas_platyrhynchos
ENSCHIG00000020361	RNPC3	95	68.089	ENSACAG00000002029	RNPC3	96	69.076	Anolis_carolinensis
ENSCHIG00000020361	RNPC3	100	92.650	ENSANAG00000019950	RNPC3	100	92.650	Aotus_nancymaae
ENSCHIG00000020361	RNPC3	95	54.858	ENSACLG00000014702	rnpc3	96	55.354	Astatotilapia_calliptera
ENSCHIG00000020361	RNPC3	94	58.032	ENSAMXG00000033372	rnpc3	96	58.000	Astyanax_mexicanus
ENSCHIG00000020361	RNPC3	100	98.839	ENSBTAG00000019091	RNPC3	100	98.839	Bos_taurus
ENSCHIG00000020361	RNPC3	100	88.201	ENSCJAG00000035686	RNPC3	100	85.880	Callithrix_jacchus
ENSCHIG00000020361	RNPC3	100	93.436	ENSCAFG00000019972	RNPC3	100	93.436	Canis_familiaris
ENSCHIG00000020361	RNPC3	100	93.436	ENSCAFG00020011300	RNPC3	100	93.436	Canis_lupus_dingo
ENSCHIG00000020361	RNPC3	100	90.716	ENSTSYG00000030256	RNPC3	100	90.716	Carlito_syrichta
ENSCHIG00000020361	RNPC3	84	78.719	ENSCAPG00000013600	RNPC3	99	78.261	Cavia_aperea
ENSCHIG00000020361	RNPC3	100	90.135	ENSCPOG00000031638	RNPC3	100	90.135	Cavia_porcellus
ENSCHIG00000020361	RNPC3	100	92.650	ENSCCAG00000024301	RNPC3	100	92.650	Cebus_capucinus
ENSCHIG00000020361	RNPC3	98	71.230	ENSCATG00000035930	-	99	70.040	Cercocebus_atys
ENSCHIG00000020361	RNPC3	99	93.010	ENSCATG00000002086	RNPC3	99	93.010	Cercocebus_atys
ENSCHIG00000020361	RNPC3	100	86.847	ENSCLAG00000005169	RNPC3	100	88.008	Chinchilla_lanigera
ENSCHIG00000020361	RNPC3	99	92.816	ENSCSAG00000001519	RNPC3	99	92.816	Chlorocebus_sabaeus
ENSCHIG00000020361	RNPC3	95	71.486	ENSCPBG00000028311	RNPC3	95	71.687	Chrysemys_picta_bellii
ENSCHIG00000020361	RNPC3	95	36.527	ENSCING00000021276	-	100	36.527	Ciona_intestinalis
ENSCHIG00000020361	RNPC3	58	61.667	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSCHIG00000020361	RNPC3	99	92.816	ENSCANG00000031444	RNPC3	99	92.816	Colobus_angolensis_palliatus
ENSCHIG00000020361	RNPC3	99	90.698	ENSCGRG00001019276	Rnpc3	100	90.698	Cricetulus_griseus_chok1gshd
ENSCHIG00000020361	RNPC3	87	91.150	ENSCGRG00000000053	Rnpc3	100	91.150	Cricetulus_griseus_crigri
ENSCHIG00000020361	RNPC3	94	54.049	ENSCSEG00000013475	rnpc3	96	54.545	Cynoglossus_semilaevis
ENSCHIG00000020361	RNPC3	94	55.467	ENSCVAG00000002645	rnpc3	97	55.621	Cyprinodon_variegatus
ENSCHIG00000020361	RNPC3	95	55.030	ENSDARG00000011247	rnpc3	93	64.740	Danio_rerio
ENSCHIG00000020361	RNPC3	100	92.070	ENSDNOG00000047498	-	100	92.070	Dasypus_novemcinctus
ENSCHIG00000020361	RNPC3	100	92.070	ENSDNOG00000044555	-	100	92.070	Dasypus_novemcinctus
ENSCHIG00000020361	RNPC3	99	90.504	ENSDORG00000027343	Rnpc3	99	90.504	Dipodomys_ordii
ENSCHIG00000020361	RNPC3	95	48.431	ENSEBUG00000002068	rnpc3	97	48.915	Eptatretus_burgeri
ENSCHIG00000020361	RNPC3	100	93.243	ENSEASG00005015957	RNPC3	100	93.243	Equus_asinus_asinus
ENSCHIG00000020361	RNPC3	100	93.436	ENSECAG00000021148	RNPC3	100	93.436	Equus_caballus
ENSCHIG00000020361	RNPC3	95	52.762	ENSELUG00000002264	rnpc3	97	54.143	Esox_lucius
ENSCHIG00000020361	RNPC3	100	93.629	ENSFCAG00000024312	RNPC3	100	93.629	Felis_catus
ENSCHIG00000020361	RNPC3	87	71.145	ENSFALG00000002580	RNPC3	99	72.170	Ficedula_albicollis
ENSCHIG00000020361	RNPC3	99	91.279	ENSFDAG00000019948	RNPC3	100	91.279	Fukomys_damarensis
ENSCHIG00000020361	RNPC3	95	50.803	ENSFHEG00000020647	rnpc3	98	50.898	Fundulus_heteroclitus
ENSCHIG00000020361	RNPC3	95	53.600	ENSGMOG00000019213	rnpc3	95	53.737	Gadus_morhua
ENSCHIG00000020361	RNPC3	95	71.919	ENSGALG00000005162	RNPC3	89	71.313	Gallus_gallus
ENSCHIG00000020361	RNPC3	95	53.012	ENSGAFG00000017236	rnpc3	96	54.108	Gambusia_affinis
ENSCHIG00000020361	RNPC3	95	54.400	ENSGACG00000002048	rnpc3	96	55.446	Gasterosteus_aculeatus
ENSCHIG00000020361	RNPC3	95	71.486	ENSGAGG00000008438	RNPC3	95	71.888	Gopherus_agassizii
ENSCHIG00000020361	RNPC3	99	74.855	ENSGGOG00000026201	-	98	75.937	Gorilla_gorilla
ENSCHIG00000020361	RNPC3	79	78.378	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSCHIG00000020361	RNPC3	100	90.909	ENSHGLG00000001708	RNPC3	100	90.909	Heterocephalus_glaber_female
ENSCHIG00000020361	RNPC3	100	90.909	ENSHGLG00100003005	RNPC3	100	90.909	Heterocephalus_glaber_male
ENSCHIG00000020361	RNPC3	95	53.213	ENSHCOG00000017135	rnpc3	97	53.908	Hippocampus_comes
ENSCHIG00000020361	RNPC3	95	56.713	ENSIPUG00000002916	rnpc3	97	54.871	Ictalurus_punctatus
ENSCHIG00000020361	RNPC3	100	91.489	ENSSTOG00000025020	RNPC3	100	91.489	Ictidomys_tridecemlineatus
ENSCHIG00000020361	RNPC3	99	88.372	ENSJJAG00000010203	Rnpc3	100	89.147	Jaculus_jaculus
ENSCHIG00000020361	RNPC3	95	55.354	ENSKMAG00000017358	rnpc3	97	56.162	Kryptolebias_marmoratus
ENSCHIG00000020361	RNPC3	95	55.976	ENSLBEG00000024901	rnpc3	95	56.574	Labrus_bergylta
ENSCHIG00000020361	RNPC3	95	61.847	ENSLACG00000005720	RNPC3	90	61.400	Latimeria_chalumnae
ENSCHIG00000020361	RNPC3	95	58.282	ENSLOCG00000007986	rnpc3	96	60.243	Lepisosteus_oculatus
ENSCHIG00000020361	RNPC3	99	89.922	ENSLAFG00000032342	RNPC3	100	89.922	Loxodonta_africana
ENSCHIG00000020361	RNPC3	99	92.816	ENSMFAG00000002004	RNPC3	99	92.816	Macaca_fascicularis
ENSCHIG00000020361	RNPC3	98	67.850	ENSMFAG00000002917	-	99	67.717	Macaca_fascicularis
ENSCHIG00000020361	RNPC3	99	92.816	ENSMMUG00000018039	RNPC3	99	92.816	Macaca_mulatta
ENSCHIG00000020361	RNPC3	82	85.116	ENSMMUG00000002098	-	93	85.116	Macaca_mulatta
ENSCHIG00000020361	RNPC3	98	64.961	ENSMNEG00000029209	-	99	66.733	Macaca_nemestrina
ENSCHIG00000020361	RNPC3	99	87.961	ENSMNEG00000033950	RNPC3	99	87.961	Macaca_nemestrina
ENSCHIG00000020361	RNPC3	99	93.010	ENSMLEG00000033628	RNPC3	99	93.010	Mandrillus_leucophaeus
ENSCHIG00000020361	RNPC3	98	70.334	ENSMLEG00000034644	-	98	69.336	Mandrillus_leucophaeus
ENSCHIG00000020361	RNPC3	95	51.195	ENSMAMG00000007496	rnpc3	97	51.287	Mastacembelus_armatus
ENSCHIG00000020361	RNPC3	98	52.581	ENSMZEG00005020233	rnpc3	97	54.257	Maylandia_zebra
ENSCHIG00000020361	RNPC3	87	70.395	ENSMGAG00000006381	RNPC3	99	70.833	Meleagris_gallopavo
ENSCHIG00000020361	RNPC3	97	92.786	ENSMAUG00000001358	Rnpc3	100	91.667	Mesocricetus_auratus
ENSCHIG00000020361	RNPC3	99	93.411	ENSMICG00000029591	RNPC3	99	93.411	Microcebus_murinus
ENSCHIG00000020361	RNPC3	97	91.400	ENSMOCG00000013423	Rnpc3	100	89.961	Microtus_ochrogaster
ENSCHIG00000020361	RNPC3	95	52.024	ENSMMOG00000005309	rnpc3	97	52.535	Mola_mola
ENSCHIG00000020361	RNPC3	99	77.907	ENSMODG00000002946	RNPC3	99	77.907	Monodelphis_domestica
ENSCHIG00000020361	RNPC3	96	52.039	ENSMALG00000015471	rnpc3	99	52.632	Monopterus_albus
ENSCHIG00000020361	RNPC3	99	89.147	MGP_CAROLIEiJ_G0025555	Rnpc3	100	89.391	Mus_caroli
ENSCHIG00000020361	RNPC3	99	89.535	ENSMUSG00000027981	Rnpc3	100	89.535	Mus_musculus
ENSCHIG00000020361	RNPC3	99	89.147	MGP_PahariEiJ_G0027001	Rnpc3	100	89.391	Mus_pahari
ENSCHIG00000020361	RNPC3	99	88.953	MGP_SPRETEiJ_G0026505	Rnpc3	100	89.194	Mus_spretus
ENSCHIG00000020361	RNPC3	100	92.664	ENSMPUG00000007349	RNPC3	100	92.664	Mustela_putorius_furo
ENSCHIG00000020361	RNPC3	100	89.749	ENSMLUG00000028743	RNPC3	100	89.749	Myotis_lucifugus
ENSCHIG00000020361	RNPC3	99	89.689	ENSNGAG00000010939	Rnpc3	99	89.689	Nannospalax_galili
ENSCHIG00000020361	RNPC3	95	54.656	ENSNBRG00000012196	rnpc3	93	55.152	Neolamprologus_brichardi
ENSCHIG00000020361	RNPC3	100	93.424	ENSNLEG00000012013	RNPC3	100	93.424	Nomascus_leucogenys
ENSCHIG00000020361	RNPC3	100	87.234	ENSODEG00000007612	RNPC3	100	87.234	Octodon_degus
ENSCHIG00000020361	RNPC3	95	55.152	ENSONIG00000004770	rnpc3	99	55.556	Oreochromis_niloticus
ENSCHIG00000020361	RNPC3	90	77.682	ENSOANG00000008220	RNPC3	99	77.253	Ornithorhynchus_anatinus
ENSCHIG00000020361	RNPC3	100	92.070	ENSOCUG00000004016	RNPC3	100	92.070	Oryctolagus_cuniculus
ENSCHIG00000020361	RNPC3	95	53.175	ENSORLG00000005694	rnpc3	97	54.563	Oryzias_latipes
ENSCHIG00000020361	RNPC3	95	53.770	ENSORLG00020005513	rnpc3	97	54.653	Oryzias_latipes_hni
ENSCHIG00000020361	RNPC3	95	53.373	ENSORLG00015002179	rnpc3	97	54.257	Oryzias_latipes_hsok
ENSCHIG00000020361	RNPC3	95	54.234	ENSOMEG00000017737	rnpc3	97	55.332	Oryzias_melastigma
ENSCHIG00000020361	RNPC3	100	93.037	ENSOGAG00000026182	RNPC3	100	93.037	Otolemur_garnettii
ENSCHIG00000020361	RNPC3	100	99.807	ENSOARG00000018719	RNPC3	100	99.807	Ovis_aries
ENSCHIG00000020361	RNPC3	100	93.050	ENSPPAG00000037459	RNPC3	100	93.050	Pan_paniscus
ENSCHIG00000020361	RNPC3	100	75.822	ENSPPAG00000030278	-	100	76.015	Pan_paniscus
ENSCHIG00000020361	RNPC3	100	93.436	ENSPPRG00000020246	RNPC3	100	93.436	Panthera_pardus
ENSCHIG00000020361	RNPC3	98	93.504	ENSPTIG00000009887	RNPC3	100	93.504	Panthera_tigris_altaica
ENSCHIG00000020361	RNPC3	100	93.424	ENSPTRG00000033902	RNPC3	100	93.424	Pan_troglodytes
ENSCHIG00000020361	RNPC3	100	75.822	ENSPTRG00000044227	-	100	75.822	Pan_troglodytes
ENSCHIG00000020361	RNPC3	98	73.477	ENSPANG00000029957	-	100	72.299	Papio_anubis
ENSCHIG00000020361	RNPC3	99	92.816	ENSPANG00000012137	RNPC3	99	92.816	Papio_anubis
ENSCHIG00000020361	RNPC3	95	53.254	ENSPKIG00000008828	rnpc3	95	52.535	Paramormyrops_kingsleyae
ENSCHIG00000020361	RNPC3	64	68.675	ENSPSIG00000007396	RNPC3	99	67.470	Pelodiscus_sinensis
ENSCHIG00000020361	RNPC3	93	51.639	ENSPMGG00000011742	rnpc3	95	52.772	Periophthalmus_magnuspinnatus
ENSCHIG00000020361	RNPC3	88	90.810	ENSPEMG00000020112	Rnpc3	100	91.593	Peromyscus_maniculatus_bairdii
ENSCHIG00000020361	RNPC3	96	45.211	ENSPMAG00000003778	rnpc3	98	44.359	Petromyzon_marinus
ENSCHIG00000020361	RNPC3	99	78.488	ENSPCIG00000004415	-	99	78.488	Phascolarctos_cinereus
ENSCHIG00000020361	RNPC3	95	53.414	ENSPFOG00000009895	rnpc3	97	53.678	Poecilia_formosa
ENSCHIG00000020361	RNPC3	95	53.414	ENSPLAG00000012023	rnpc3	97	53.678	Poecilia_latipinna
ENSCHIG00000020361	RNPC3	95	53.614	ENSPMEG00000003663	rnpc3	97	53.877	Poecilia_mexicana
ENSCHIG00000020361	RNPC3	96	52.767	ENSPREG00000010206	rnpc3	99	53.089	Poecilia_reticulata
ENSCHIG00000020361	RNPC3	84	89.631	ENSPPYG00000001102	RNPC3	99	89.631	Pongo_abelii
ENSCHIG00000020361	RNPC3	95	54.656	ENSPNYG00000020603	rnpc3	96	55.152	Pundamilia_nyererei
ENSCHIG00000020361	RNPC3	95	54.365	ENSPNAG00000000524	rnpc3	89	53.725	Pygocentrus_nattereri
ENSCHIG00000020361	RNPC3	99	87.791	ENSRNOG00000017310	Rnpc3	100	87.791	Rattus_norvegicus
ENSCHIG00000020361	RNPC3	99	87.597	ENSRBIG00000043897	RNPC3	99	87.597	Rhinopithecus_bieti
ENSCHIG00000020361	RNPC3	99	93.398	ENSRROG00000032334	RNPC3	99	93.398	Rhinopithecus_roxellana
ENSCHIG00000020361	RNPC3	100	91.876	ENSSBOG00000024473	RNPC3	100	91.876	Saimiri_boliviensis_boliviensis
ENSCHIG00000020361	RNPC3	99	78.101	ENSSHAG00000011859	RNPC3	99	78.101	Sarcophilus_harrisii
ENSCHIG00000020361	RNPC3	96	59.237	ENSSFOG00015013055	rnpc3	99	58.434	Scleropages_formosus
ENSCHIG00000020361	RNPC3	95	52.096	ENSSMAG00000020346	rnpc3	97	52.590	Scophthalmus_maximus
ENSCHIG00000020361	RNPC3	95	54.890	ENSSDUG00000006600	rnpc3	96	55.378	Seriola_dumerili
ENSCHIG00000020361	RNPC3	95	54.890	ENSSLDG00000007979	rnpc3	96	55.378	Seriola_lalandi_dorsalis
ENSCHIG00000020361	RNPC3	96	65.209	ENSSPUG00000003872	-	93	65.209	Sphenodon_punctatus
ENSCHIG00000020361	RNPC3	95	70.423	ENSSPUG00000008539	-	94	70.766	Sphenodon_punctatus
ENSCHIG00000020361	RNPC3	95	55.488	ENSSPAG00000005633	rnpc3	97	56.504	Stegastes_partitus
ENSCHIG00000020361	RNPC3	100	93.617	ENSSSCG00000037254	RNPC3	100	92.650	Sus_scrofa
ENSCHIG00000020361	RNPC3	87	70.705	ENSTGUG00000004795	-	99	69.824	Taeniopygia_guttata
ENSCHIG00000020361	RNPC3	95	54.747	ENSTNIG00000018963	rnpc3	97	55.444	Tetraodon_nigroviridis
ENSCHIG00000020361	RNPC3	98	93.898	ENSUMAG00000007775	RNPC3	100	93.898	Ursus_maritimus
ENSCHIG00000020361	RNPC3	100	93.436	ENSVVUG00000000331	RNPC3	100	93.436	Vulpes_vulpes
ENSCHIG00000020361	RNPC3	95	51.772	ENSXETG00000025027	rnpc3	97	50.881	Xenopus_tropicalis
ENSCHIG00000020361	RNPC3	96	51.650	ENSXCOG00000005013	rnpc3	97	52.539	Xiphophorus_couchianus
ENSCHIG00000020361	RNPC3	95	53.400	ENSXMAG00000006495	rnpc3	97	54.059	Xiphophorus_maculatus